RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 A8MWP4 228 aa8.5□□□□□ -1.05
PCDHGC3-204ENST00000617222 BPY2O14599 106 aa8.5□□□□□ -1.05
PCDHGC3-204ENST00000617222 LINC00313P59037 77 aa8.5□□□□□ -1.05
PCDHGC3-204ENST00000617222 ACYP1P07311 99 aa8.49□□□□□ -1.05
PCDHGC3-204ENST00000617222 NOTCH2NLQ7Z3S9 236 aa8.49□□□□□ -1.05
PCDHGC3-204ENST00000617222 IGKV3D-7A0A0C4DH55 119 aa8.48□□□□□ -1.05
PCDHGC3-204ENST00000617222 FAM240AA0A1B0GVK7 77 aa8.46□□□□□ -1.06
PCDHGC3-204ENST00000617222 C8orf87E5RJ46 101 aa8.45□□□□□ -1.06
PCDHGC3-204ENST00000617222 PRR15Q8IV56 129 aa8.45□□□□□ -1.06
PCDHGC3-204ENST00000617222 K7EQZ3 153 aa8.43□□□□□ -1.06
PCDHGC3-204ENST00000617222 J3QR89 54 aa8.42□□□□□ -1.06
PCDHGC3-204ENST00000617222 C8orf17Q9NRJ1 99 aa8.42□□□□□ -1.06
PCDHGC3-204ENST00000617222 KRTAP16-1A8MUX0 517 aa8.41□□□□□ -1.06
PCDHGC3-204ENST00000617222 SEC61BP60468 96 aaKnown RBP8.41□□□□□ -1.06
PCDHGC3-204ENST00000617222 RPL37P61927 97 aaKnown RBP8.41□□□□□ -1.06
PCDHGC3-204ENST00000617222 Q8N9L7 120 aa8.41□□□□□ -1.06
PCDHGC3-204ENST00000617222 Q75L30 129 aa8.39□□□□□ -1.07
PCDHGC3-204ENST00000617222 UBR4Q5T4S7 5183 aa8.38□□□□□ -1.07
PCDHGC3-204ENST00000617222 C20orf166-AS1Q96NR2 134 aa8.38□□□□□ -1.07
PCDHGC3-204ENST00000617222 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
PCDHGC3-204ENST00000617222 A8MUU9 505 aa8.37□□□□□ -1.07
PCDHGC3-204ENST00000617222 CXCL6P80162 114 aa8.37□□□□□ -1.07
PCDHGC3-204ENST00000617222 PCOTHQ58A44 107 aa8.37□□□□□ -1.07
PCDHGC3-204ENST00000617222 MMP24-AS1A0A0U1RRL7 71 aa8.36□□□□□ -1.07
PCDHGC3-204ENST00000617222 hDV103S1A0JD37 113 aa8.32□□□□□ -1.08
PCDHGC3-204ENST00000617222 ATP11AUNQ6ZP68 121 aa8.32□□□□□ -1.08
PCDHGC3-204ENST00000617222 LINC00643Q86TS7 51 aa8.32□□□□□ -1.08
PCDHGC3-204ENST00000617222 WFDC13Q8IUB5 93 aa8.31□□□□□ -1.08
PCDHGC3-204ENST00000617222 TMEM254Q8TBM7 123 aa8.31□□□□□ -1.08
PCDHGC3-204ENST00000617222 ATP5EP2Q5VTU8 51 aa8.3□□□□□ -1.08
PCDHGC3-204ENST00000617222 MRPL34Q9BQ48 92 aaKnown RBP8.3□□□□□ -1.08
PCDHGC3-204ENST00000617222 K7ERU9 68 aa8.29□□□□□ -1.08
PCDHGC3-204ENST00000617222 Q8N9P0 234 aaPredicted RBP8.29□□□□□ -1.08
PCDHGC3-204ENST00000617222 CASC2Q6XLA1 102 aa8.28□□□□□ -1.08
PCDHGC3-204ENST00000617222 HCG22E2RYF7 251 aa8.27□□□□□ -1.09
PCDHGC3-204ENST00000617222 KRTAP4-1Q9BYQ7 146 aa8.27□□□□□ -1.09
PCDHGC3-204ENST00000617222 RNF213Q63HN8 5207 aa8.25□□□□□ -1.09
PCDHGC3-204ENST00000617222 HIST1H4AP62805 103 aaKnown RBP8.24□□□□□ -1.09
PCDHGC3-204ENST00000617222 NDUFS5O43920 106 aa8.23□□□□□ -1.09
PCDHGC3-204ENST00000617222 ZCCHC13Q8WW36 166 aaKnown RBP8.2□□□□□ -1.1
PCDHGC3-204ENST00000617222 A0A087WVE0 104 aa8.16□□□□□ -1.1
PCDHGC3-204ENST00000617222 MUC2Q02817 5179 aa8.13□□□□□ -1.11
PCDHGC3-204ENST00000617222 MT-ATP8P03928 68 aa8.12□□□□□ -1.11
PCDHGC3-204ENST00000617222 Q5W150 140 aa8.12□□□□□ -1.11
PCDHGC3-204ENST00000617222 TP53AIP1Q9HCN2 124 aa8.07□□□□□ -1.12
PCDHGC3-204ENST00000617222 SPINK7P58062 85 aa8.06□□□□□ -1.12
PCDHGC3-204ENST00000617222 IMUPQ9GZP8 106 aa8.06□□□□□ -1.12
PCDHGC3-204ENST00000617222 A0A0U1RQV1 116 aa8.04□□□□□ -1.12
PCDHGC3-204ENST00000617222 IGKV2D-30A0A075B6S6 120 aa8□□□□□ -1.13
PCDHGC3-204ENST00000617222 IGKV2-30P06310 120 aa8□□□□□ -1.13
PCDHGC3-204ENST00000617222 HRES1P13985 223 aa7.99□□□□□ -1.13
PCDHGC3-204ENST00000617222 UQCRQO14949 82 aa7.98□□□□□ -1.13
PCDHGC3-204ENST00000617222 SCGB1A1P11684 91 aa7.98□□□□□ -1.13
PCDHGC3-204ENST00000617222 KRTAP19-2Q3LHN2 52 aa7.98□□□□□ -1.13
PCDHGC3-204ENST00000617222 C7orf65Q6ZTY9 151 aa7.96□□□□□ -1.14
PCDHGC3-204ENST00000617222 LCE2CQ5TA81 110 aa7.95□□□□□ -1.14
PCDHGC3-204ENST00000617222 COX6B2Q6YFQ2 88 aa7.95□□□□□ -1.14
PCDHGC3-204ENST00000617222 OCR1Q9BZK8 76 aa7.95□□□□□ -1.14
PCDHGC3-204ENST00000617222 FAT4Q6V0I7 4981 aa7.94□□□□□ -1.14
PCDHGC3-204ENST00000617222 TRAV22A0A0B4J277 110 aa7.94□□□□□ -1.14
PCDHGC3-204ENST00000617222 MPLKIPQ8TAP9 179 aa7.93□□□□□ -1.14
PCDHGC3-204ENST00000617222 FAM236AA0A1B0GUQ0 79 aa7.92□□□□□ -1.14
PCDHGC3-204ENST00000617222 FAM236BA0A1B0GV22 79 aa7.92□□□□□ -1.14
PCDHGC3-204ENST00000617222 RBM12B-AS1Q9P1G2 102 aa7.92□□□□□ -1.14
PCDHGC3-204ENST00000617222 H0Y9P7 68 aa7.91□□□□□ -1.14
PCDHGC3-204ENST00000617222 FAM236DA0A1B0GTK5 79 aa7.89□□□□□ -1.15
PCDHGC3-204ENST00000617222 FAM236CP0DP71 79 aa7.89□□□□□ -1.15
PCDHGC3-204ENST00000617222 ATOX1O00244 68 aa7.87□□□□□ -1.15
PCDHGC3-204ENST00000617222 LOC101927531A0A1B0GV80 90 aa7.86□□□□□ -1.15
PCDHGC3-204ENST00000617222 CYP4F30PQ9H0H9 118 aa7.86□□□□□ -1.15
PCDHGC3-204ENST00000617222 MP68P56378 58 aa7.85□□□□□ -1.15
PCDHGC3-204ENST00000617222 C5orf47Q569G3 176 aa7.85□□□□□ -1.15
PCDHGC3-204ENST00000617222 C1orf64Q8NEQ6 169 aa7.83□□□□□ -1.16
PCDHGC3-204ENST00000617222 LINC00208Q96KT6 92 aa7.83□□□□□ -1.16
PCDHGC3-204ENST00000617222 MT1HP80294 61 aa7.82□□□□□ -1.16
PCDHGC3-204ENST00000617222 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
PCDHGC3-204ENST00000617222 SMIM20Q8N5G0 67 aa7.82□□□□□ -1.16
PCDHGC3-204ENST00000617222 TRAV7A0A075B6U4 112 aa7.81□□□□□ -1.16
PCDHGC3-204ENST00000617222 C4orf26Q17RF5 130 aa7.81□□□□□ -1.16
PCDHGC3-204ENST00000617222 H3BPC8 53 aa7.77□□□□□ -1.17
PCDHGC3-204ENST00000617222 FLGP20930 4061 aaPredicted RBP7.74□□□□□ -1.17
PCDHGC3-204ENST00000617222 M0R2T5 61 aa7.73□□□□□ -1.17
PCDHGC3-204ENST00000617222 H1FX-AS1Q4G0G2 97 aa7.72□□□□□ -1.17
PCDHGC3-204ENST00000617222 KLKP1Q107X0 134 aa7.71□□□□□ -1.18
PCDHGC3-204ENST00000617222 SERP2Q8N6R1 65 aa7.71□□□□□ -1.18
PCDHGC3-204ENST00000617222 KRTAP3-1Q9BYR8 98 aa7.71□□□□□ -1.18
PCDHGC3-204ENST00000617222 SNURFQ9Y675 71 aa7.63□□□□□ -1.19
PCDHGC3-204ENST00000617222 C20orf197Q8N268 126 aa7.62□□□□□ -1.19
PCDHGC3-204ENST00000617222 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
PCDHGC3-204ENST00000617222 COX7CP15954 63 aa7.59□□□□□ -1.19
PCDHGC3-204ENST00000617222 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
PCDHGC3-204ENST00000617222 ANAPC13Q9BS18 74 aa7.56□□□□□ -1.2
PCDHGC3-204ENST00000617222 S4R3F8 94 aa7.56□□□□□ -1.2
PCDHGC3-204ENST00000617222 A8MUN3 132 aa7.54□□□□□ -1.2
PCDHGC3-204ENST00000617222 LCA10Q71F78 164 aa7.51□□□□□ -1.21
PCDHGC3-204ENST00000617222 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
PCDHGC3-204ENST00000617222 KRTAP9-8Q9BYQ0 159 aa7.47□□□□□ -1.21
PCDHGC3-204ENST00000617222 CSAG1Q6PB30 78 aa7.45□□□□□ -1.22
PCDHGC3-204ENST00000617222 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
PCDHGC3-204ENST00000617222 SPANXA2-OT1Q8N9U9 137 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms