RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 ZNF292O60281 2723 aa7.03□□□□□ -1.28
NLRC3-204ENST00000615877 BAHCC1Q9P281 2608 aa7.02□□□□□ -1.29
NLRC3-204ENST00000615877 KRTAP1-4P0C5Y4 121 aa7.01□□□□□ -1.29
NLRC3-204ENST00000615877 REV3LO60673 3130 aa7.01□□□□□ -1.29
NLRC3-204ENST00000615877 CFAP47Q6ZTR5 3102 aa7□□□□□ -1.29
NLRC3-204ENST00000615877 COL6A5A8TX70 2615 aa7□□□□□ -1.29
NLRC3-204ENST00000615877 STAB2Q8WWQ8 2551 aa6.98□□□□□ -1.29
NLRC3-204ENST00000615877 KRTAP21-3Q3LHN1 58 aa6.97□□□□□ -1.29
NLRC3-204ENST00000615877 CRYBG3Q68DQ2 2970 aa6.97□□□□□ -1.29
NLRC3-204ENST00000615877 KALRNO60229 2985 aa6.97□□□□□ -1.29
NLRC3-204ENST00000615877 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
NLRC3-204ENST00000615877 ASPMQ8IZT6 3477 aa6.91□□□□□ -1.3
NLRC3-204ENST00000615877 APCP25054 2843 aa6.9□□□□□ -1.31
NLRC3-204ENST00000615877 ITPR2Q14571 2701 aa6.89□□□□□ -1.31
NLRC3-204ENST00000615877 UBR5O95071 2799 aaPredicted RBP6.89□□□□□ -1.31
NLRC3-204ENST00000615877 IGSF10Q6WRI0 2623 aa6.89□□□□□ -1.31
NLRC3-204ENST00000615877 NSD1Q96L73 2696 aaPredicted RBP6.88□□□□□ -1.31
NLRC3-204ENST00000615877 DSPP15924 2871 aaKnown RBP6.88□□□□□ -1.31
NLRC3-204ENST00000615877 MAP1AP78559 2803 aaPredicted RBP6.87□□□□□ -1.31
NLRC3-204ENST00000615877 ITPR1Q14643 2758 aa6.85□□□□□ -1.31
NLRC3-204ENST00000615877 WDFY3Q8IZQ1 3526 aa6.85□□□□□ -1.31
NLRC3-204ENST00000615877 BOD1L1Q8NFC6 3051 aa6.85□□□□□ -1.31
NLRC3-204ENST00000615877 TPRXLQ17RH7 258 aa6.85□□□□□ -1.31
NLRC3-204ENST00000615877 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
NLRC3-204ENST00000615877 LRBAP50851 2863 aa6.8□□□□□ -1.32
NLRC3-204ENST00000615877 FRYLO94915 3013 aa6.79□□□□□ -1.32
NLRC3-204ENST00000615877 KRTAP13-3Q3SY46 172 aa6.77□□□□□ -1.33
NLRC3-204ENST00000615877 UTP20O75691 2785 aaKnown RBP6.76□□□□□ -1.33
NLRC3-204ENST00000615877 TNRC18O15417 2968 aaPredicted RBP6.76□□□□□ -1.33
NLRC3-204ENST00000615877 NBEAQ8NFP9 2946 aa6.75□□□□□ -1.33
NLRC3-204ENST00000615877 ASH1LQ9NR48 2969 aaKnown RBP6.73□□□□□ -1.33
NLRC3-204ENST00000615877 HIVEP1P15822 2718 aa6.72□□□□□ -1.33
NLRC3-204ENST00000615877 KRTAP12-2P59991 146 aa6.69□□□□□ -1.34
NLRC3-204ENST00000615877 DMXL2Q8TDJ6 3036 aa6.68□□□□□ -1.34
NLRC3-204ENST00000615877 ATMQ13315 3056 aa6.68□□□□□ -1.34
NLRC3-204ENST00000615877 ADGRG4Q8IZF6 3080 aa6.66□□□□□ -1.34
NLRC3-204ENST00000615877 TACC2O95359 2948 aa6.66□□□□□ -1.34
NLRC3-204ENST00000615877 ZZEF1O43149 2961 aa6.63□□□□□ -1.35
NLRC3-204ENST00000615877 NBPF19A0A087WUL8 3843 aa6.63□□□□□ -1.35
NLRC3-204ENST00000615877 DCHS1Q96JQ0 3298 aa6.62□□□□□ -1.35
NLRC3-204ENST00000615877 DMXL1Q9Y485 3027 aa6.61□□□□□ -1.35
NLRC3-204ENST00000615877 COL12A1Q99715 3063 aa6.61□□□□□ -1.35
NLRC3-204ENST00000615877 ZFHX4Q86UP3 3567 aa6.6□□□□□ -1.35
NLRC3-204ENST00000615877 LOC400499M0QZD8 3231 aa6.57□□□□□ -1.36
NLRC3-204ENST00000615877 DMDP11532 3685 aa6.56□□□□□ -1.36
NLRC3-204ENST00000615877 LAMA5O15230 3695 aa6.56□□□□□ -1.36
NLRC3-204ENST00000615877 KRTAP13-4Q3LI77 160 aa6.54□□□□□ -1.36
NLRC3-204ENST00000615877 KRTAP12-1P59990 96 aa6.53□□□□□ -1.36
NLRC3-204ENST00000615877 FLNCQ14315 2725 aa6.53□□□□□ -1.36
NLRC3-204ENST00000615877 RELNP78509 3460 aa6.52□□□□□ -1.37
NLRC3-204ENST00000615877 NIPBLQ6KC79 2804 aaeCLIP6.51□□□□□ -1.37
NLRC3-204ENST00000615877 CELSR2Q9HCU4 2923 aa6.5□□□□□ -1.37
NLRC3-204ENST00000615877 CSMD1Q96PZ7 3565 aa6.45□□□□□ -1.38
NLRC3-204ENST00000615877 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
NLRC3-204ENST00000615877 HRNRQ86YZ3 2850 aaPredicted RBP6.43□□□□□ -1.38
NLRC3-204ENST00000615877 TGP01266 2768 aa6.43□□□□□ -1.38
NLRC3-204ENST00000615877 DCHS2Q6V1P9 2916 aa6.42□□□□□ -1.38
NLRC3-204ENST00000615877 TENM4Q6N022 2769 aa6.4□□□□□ -1.38
NLRC3-204ENST00000615877 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
NLRC3-204ENST00000615877 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
NLRC3-204ENST00000615877 ZANQ9Y493 2812 aa6.33□□□□□ -1.4
NLRC3-204ENST00000615877 TENM2Q9NT68 2774 aa6.32□□□□□ -1.4
NLRC3-204ENST00000615877 KRTAP10-6P60371 365 aaPredicted RBP6.29□□□□□ -1.4
NLRC3-204ENST00000615877 SMG1Q96Q15 3661 aaKnown RBP6.29□□□□□ -1.4
NLRC3-204ENST00000615877 FBN2P35556 2912 aa6.27□□□□□ -1.41
NLRC3-204ENST00000615877 SPENQ96T58 3664 aaKnown RBP6.26□□□□□ -1.41
NLRC3-204ENST00000615877 NF1P21359 2839 aa6.25□□□□□ -1.41
NLRC3-204ENST00000615877 TENM1Q9UKZ4 2725 aa6.25□□□□□ -1.41
NLRC3-204ENST00000615877 CELSR1Q9NYQ6 3014 aa6.21□□□□□ -1.41
NLRC3-204ENST00000615877 SVEP1Q4LDE5 3571 aa6.21□□□□□ -1.42
NLRC3-204ENST00000615877 MUC3AQ02505 3323 aa6.15□□□□□ -1.42
NLRC3-204ENST00000615877 ZFHX3Q15911 3703 aa6.12□□□□□ -1.43
NLRC3-204ENST00000615877 INE1O15225 51 aa6.11□□□□□ -1.43
NLRC3-204ENST00000615877 TENM3Q9P273 2699 aa6.1□□□□□ -1.43
NLRC3-204ENST00000615877 CSMD2Q7Z408 3487 aa6.08□□□□□ -1.44
NLRC3-204ENST00000615877 MXRA5Q9NR99 2828 aa6.06□□□□□ -1.44
NLRC3-204ENST00000615877 KRTAP3-2Q9BYR7 98 aa6.05□□□□□ -1.44
NLRC3-204ENST00000615877 CUBNO60494 3623 aa6.04□□□□□ -1.44
NLRC3-204ENST00000615877 BSNQ9UPA5 3926 aa6.03□□□□□ -1.44
NLRC3-204ENST00000615877 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
NLRC3-204ENST00000615877 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
NLRC3-204ENST00000615877 PKD1L1Q8TDX9 2849 aa5.95□□□□□ -1.46
NLRC3-204ENST00000615877 VWFP04275 2813 aa5.95□□□□□ -1.46
NLRC3-204ENST00000615877 ANK3Q12955 4377 aaKnown RBP5.95□□□□□ -1.46
NLRC3-204ENST00000615877 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
NLRC3-204ENST00000615877 PDZD2O15018 2839 aa5.93□□□□□ -1.46
NLRC3-204ENST00000615877 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
NLRC3-204ENST00000615877 VPS13CQ709C8 3753 aa5.85□□□□□ -1.47
NLRC3-204ENST00000615877 TRRAPQ9Y4A5 3859 aa5.78□□□□□ -1.48
NLRC3-204ENST00000615877 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
NLRC3-204ENST00000615877 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
NLRC3-204ENST00000615877 LORP23490 312 aaPredicted RBP5.75□□□□□ -1.49
NLRC3-204ENST00000615877 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
NLRC3-204ENST00000615877 HUWE1Q7Z6Z7 4374 aaKnown RBP5.73□□□□□ -1.49
NLRC3-204ENST00000615877 MEGF8Q7Z7M0 2845 aa5.72□□□□□ -1.49
NLRC3-204ENST00000615877 FBN3Q75N90 2809 aa5.72□□□□□ -1.49
NLRC3-204ENST00000615877 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
NLRC3-204ENST00000615877 KRTAP10-4P60372 401 aaPredicted RBP5.69□□□□□ -1.5
NLRC3-204ENST00000615877 KRTAP8-1Q8IUC2 63 aa5.68□□□□□ -1.5
NLRC3-204ENST00000615877 ALMS1Q8TCU4 4167 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms