RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 KALRNO60229 2985 aa5.15□□□□□ -1.59
COL12A1-211ENST00000615798 SZT2Q5T011 3432 aa5.15□□□□□ -1.59
COL12A1-211ENST00000615798 LRBAP50851 2863 aa5.14□□□□□ -1.59
COL12A1-211ENST00000615798 HRNRQ86YZ3 2850 aaPredicted RBP5.14□□□□□ -1.59
COL12A1-211ENST00000615798 ATMQ13315 3056 aa5.13□□□□□ -1.59
COL12A1-211ENST00000615798 KRTAP7-1Q8IUC3 87 aa5.13□□□□□ -1.59
COL12A1-211ENST00000615798 DNAH14Q0VDD8 3507 aa5.13□□□□□ -1.59
COL12A1-211ENST00000615798 KRTAP10-8P60410 259 aa5.13□□□□□ -1.59
COL12A1-211ENST00000615798 H0YAA0 97 aa5.13□□□□□ -1.59
COL12A1-211ENST00000615798 INE1O15225 51 aa5.11□□□□□ -1.59
COL12A1-211ENST00000615798 TACC2O95359 2948 aa5.09□□□□□ -1.59
COL12A1-211ENST00000615798 COL12A1Q99715 3063 aa5.09□□□□□ -1.59
COL12A1-211ENST00000615798 SRRM2Q9UQ35 2752 aaKnown RBP5.09□□□□□ -1.59
COL12A1-211ENST00000615798 BOD1L1Q8NFC6 3051 aa5.08□□□□□ -1.6
COL12A1-211ENST00000615798 ZZEF1O43149 2961 aa5.07□□□□□ -1.6
COL12A1-211ENST00000615798 SPTBN5Q9NRC6 3674 aaKnown RBP5.06□□□□□ -1.6
COL12A1-211ENST00000615798 USP34Q70CQ2 3546 aa5.06□□□□□ -1.6
COL12A1-211ENST00000615798 DMXL2Q8TDJ6 3036 aa5.05□□□□□ -1.6
COL12A1-211ENST00000615798 TNRC18O15417 2968 aaPredicted RBP5.05□□□□□ -1.6
COL12A1-211ENST00000615798 ZANQ9Y493 2812 aa5.05□□□□□ -1.6
COL12A1-211ENST00000615798 HIVEP1P15822 2718 aa5.04□□□□□ -1.6
COL12A1-211ENST00000615798 CELSR3Q9NYQ7 3312 aa5.04□□□□□ -1.6
COL12A1-211ENST00000615798 KRTAP10-1P60331 282 aa5.04□□□□□ -1.6
COL12A1-211ENST00000615798 KRTAP21-3Q3LHN1 58 aa5.03□□□□□ -1.6
COL12A1-211ENST00000615798 FREM2Q5SZK8 3169 aa5.01□□□□□ -1.61
COL12A1-211ENST00000615798 KRTAP10-2P60368 255 aa5.01□□□□□ -1.61
COL12A1-211ENST00000615798 REV3LO60673 3130 aa4.99□□□□□ -1.61
COL12A1-211ENST00000615798 TGP01266 2768 aa4.97□□□□□ -1.61
COL12A1-211ENST00000615798 EYSQ5T1H1 3165 aa4.97□□□□□ -1.61
COL12A1-211ENST00000615798 MXRA5Q9NR99 2828 aa4.96□□□□□ -1.61
COL12A1-211ENST00000615798 KRTAP13-2Q52LG2 175 aa4.95□□□□□ -1.62
COL12A1-211ENST00000615798 NF1P21359 2839 aa4.94□□□□□ -1.62
COL12A1-211ENST00000615798 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
COL12A1-211ENST00000615798 PRO2289Q9P1D8 64 aa4.91□□□□□ -1.62
COL12A1-211ENST00000615798 CELSR2Q9HCU4 2923 aa4.9□□□□□ -1.63
COL12A1-211ENST00000615798 ASH1LQ9NR48 2969 aaKnown RBP4.89□□□□□ -1.63
COL12A1-211ENST00000615798 DMXL1Q9Y485 3027 aa4.89□□□□□ -1.63
COL12A1-211ENST00000615798 COL6A3P12111 3177 aa4.89□□□□□ -1.63
COL12A1-211ENST00000615798 TENM1Q9UKZ4 2725 aa4.88□□□□□ -1.63
COL12A1-211ENST00000615798 DCHS2Q6V1P9 2916 aa4.87□□□□□ -1.63
COL12A1-211ENST00000615798 KRTAP12-2P59991 146 aa4.84□□□□□ -1.63
COL12A1-211ENST00000615798 FBN2P35556 2912 aa4.83□□□□□ -1.64
COL12A1-211ENST00000615798 KRTAP1-4P0C5Y4 121 aa4.83□□□□□ -1.64
COL12A1-211ENST00000615798 LOC400499M0QZD8 3231 aa4.82□□□□□ -1.64
COL12A1-211ENST00000615798 PDZD2O15018 2839 aa4.81□□□□□ -1.64
COL12A1-211ENST00000615798 KRTAP13-3Q3SY46 172 aa4.8□□□□□ -1.64
COL12A1-211ENST00000615798 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
COL12A1-211ENST00000615798 MYO15AQ9UKN7 3530 aa4.78□□□□□ -1.64
COL12A1-211ENST00000615798 TENM4Q6N022 2769 aa4.75□□□□□ -1.65
COL12A1-211ENST00000615798 TPRXLQ17RH7 258 aa4.75□□□□□ -1.65
COL12A1-211ENST00000615798 CRYBG3Q68DQ2 2970 aa4.74□□□□□ -1.65
COL12A1-211ENST00000615798 CFAP47Q6ZTR5 3102 aa4.71□□□□□ -1.66
COL12A1-211ENST00000615798 WDFY3Q8IZQ1 3526 aa4.71□□□□□ -1.66
COL12A1-211ENST00000615798 SPEGQ15772 3267 aa4.7□□□□□ -1.66
COL12A1-211ENST00000615798 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
COL12A1-211ENST00000615798 CELSR1Q9NYQ6 3014 aa4.69□□□□□ -1.66
COL12A1-211ENST00000615798 VWFP04275 2813 aa4.67□□□□□ -1.66
COL12A1-211ENST00000615798 TENM2Q9NT68 2774 aa4.66□□□□□ -1.66
COL12A1-211ENST00000615798 XP32Q5T750 250 aa4.66□□□□□ -1.66
COL12A1-211ENST00000615798 KRTAP10-10P60014 251 aa4.59□□□□□ -1.68
COL12A1-211ENST00000615798 KRTAP12-1P59990 96 aa4.57□□□□□ -1.68
COL12A1-211ENST00000615798 A0A1B0GVY2 172 aa4.56□□□□□ -1.68
COL12A1-211ENST00000615798 ASPMQ8IZT6 3477 aa4.55□□□□□ -1.68
COL12A1-211ENST00000615798 OTOGQ6ZRI0 2925 aa4.54□□□□□ -1.68
COL12A1-211ENST00000615798 DCHS1Q96JQ0 3298 aa4.54□□□□□ -1.68
COL12A1-211ENST00000615798 RELNP78509 3460 aa4.53□□□□□ -1.68
COL12A1-211ENST00000615798 ZFHX4Q86UP3 3567 aa4.52□□□□□ -1.69
COL12A1-211ENST00000615798 LAMA5O15230 3695 aa4.52□□□□□ -1.69
COL12A1-211ENST00000615798 DMDP11532 3685 aa4.49□□□□□ -1.69
COL12A1-211ENST00000615798 ZFHX3Q15911 3703 aa4.43□□□□□ -1.7
COL12A1-211ENST00000615798 SMG1Q96Q15 3661 aaKnown RBP4.42□□□□□ -1.7
COL12A1-211ENST00000615798 MEGF8Q7Z7M0 2845 aa4.41□□□□□ -1.7
COL12A1-211ENST00000615798 SPENQ96T58 3664 aaKnown RBP4.41□□□□□ -1.7
COL12A1-211ENST00000615798 FBN1P35555 2871 aaKnown RBP4.41□□□□□ -1.7
COL12A1-211ENST00000615798 PKD1L1Q8TDX9 2849 aa4.4□□□□□ -1.7
COL12A1-211ENST00000615798 MUC3AQ02505 3323 aa4.4□□□□□ -1.71
COL12A1-211ENST00000615798 BSNQ9UPA5 3926 aa4.39□□□□□ -1.71
COL12A1-211ENST00000615798 CSMD1Q96PZ7 3565 aa4.37□□□□□ -1.71
COL12A1-211ENST00000615798 KRTAP3-1Q9BYR8 98 aa4.35□□□□□ -1.71
COL12A1-211ENST00000615798 NBPF19A0A087WUL8 3843 aa4.34□□□□□ -1.72
COL12A1-211ENST00000615798 ANK3Q12955 4377 aaKnown RBP4.3□□□□□ -1.72
COL12A1-211ENST00000615798 KRTAP10-6P60371 365 aaPredicted RBP4.28□□□□□ -1.72
COL12A1-211ENST00000615798 SVEP1Q4LDE5 3571 aa4.27□□□□□ -1.73
COL12A1-211ENST00000615798 ALMS1Q8TCU4 4167 aa4.26□□□□□ -1.73
COL12A1-211ENST00000615798 TRRAPQ9Y4A5 3859 aa4.24□□□□□ -1.73
COL12A1-211ENST00000615798 FBN3Q75N90 2809 aa4.24□□□□□ -1.73
COL12A1-211ENST00000615798 COL7A1Q02388 2944 aa4.22□□□□□ -1.73
COL12A1-211ENST00000615798 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
COL12A1-211ENST00000615798 CUBNO60494 3623 aa4.18□□□□□ -1.74
COL12A1-211ENST00000615798 KRTAP10-4P60372 401 aaPredicted RBP4.15□□□□□ -1.75
COL12A1-211ENST00000615798 AKAP9Q99996 3911 aa4.14□□□□□ -1.75
COL12A1-211ENST00000615798 KRTAP3-2Q9BYR7 98 aa4.14□□□□□ -1.75
COL12A1-211ENST00000615798 KRTAP3-3Q9BYR6 98 aa4.13□□□□□ -1.75
COL12A1-211ENST00000615798 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
COL12A1-211ENST00000615798 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
COL12A1-211ENST00000615798 VPS13CQ709C8 3753 aa4.11□□□□□ -1.75
COL12A1-211ENST00000615798 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
COL12A1-211ENST00000615798 CSMD2Q7Z408 3487 aa4.08□□□□□ -1.76
COL12A1-211ENST00000615798 MT1HL1P0DM35 61 aa4.07□□□□□ -1.76
COL12A1-211ENST00000615798 HUWE1Q7Z6Z7 4374 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms