RNA–Protein interactions for RNA: ENST00000613886.4

RUNX1T1-249, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RUNX1T1, Length 7,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-249ENST00000613886 NSD1Q96L73 2696 aaPredicted RBP4.56□□□□□ -1.68
RUNX1T1-249ENST00000613886 ASH1LQ9NR48 2969 aaKnown RBP4.55□□□□□ -1.68
RUNX1T1-249ENST00000613886 TACC2O95359 2948 aa4.55□□□□□ -1.68
RUNX1T1-249ENST00000613886 UTP20O75691 2785 aaKnown RBP4.54□□□□□ -1.68
RUNX1T1-249ENST00000613886 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
RUNX1T1-249ENST00000613886 ITPR1Q14643 2758 aa4.53□□□□□ -1.68
RUNX1T1-249ENST00000613886 KRTAP13-1Q8IUC0 172 aa4.52□□□□□ -1.69
RUNX1T1-249ENST00000613886 ATMQ13315 3056 aa4.52□□□□□ -1.69
RUNX1T1-249ENST00000613886 COL12A1Q99715 3063 aa4.51□□□□□ -1.69
RUNX1T1-249ENST00000613886 ADGRG4Q8IZF6 3080 aa4.5□□□□□ -1.69
RUNX1T1-249ENST00000613886 USP34Q70CQ2 3546 aa4.49□□□□□ -1.69
RUNX1T1-249ENST00000613886 HIVEP1P15822 2718 aa4.49□□□□□ -1.69
RUNX1T1-249ENST00000613886 TNP1P09430 55 aa4.48□□□□□ -1.69
RUNX1T1-249ENST00000613886 A6NN06 94 aa4.47□□□□□ -1.69
RUNX1T1-249ENST00000613886 KRTAP16-1A8MUX0 517 aa4.47□□□□□ -1.69
RUNX1T1-249ENST00000613886 NBEAQ8NFP9 2946 aa4.47□□□□□ -1.69
RUNX1T1-249ENST00000613886 A0A1B0GVY2 172 aa4.46□□□□□ -1.7
RUNX1T1-249ENST00000613886 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
RUNX1T1-249ENST00000613886 EYSQ5T1H1 3165 aa4.44□□□□□ -1.7
RUNX1T1-249ENST00000613886 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
RUNX1T1-249ENST00000613886 SPTBN5Q9NRC6 3674 aaKnown RBP4.43□□□□□ -1.7
RUNX1T1-249ENST00000613886 ZZEF1O43149 2961 aa4.42□□□□□ -1.7
RUNX1T1-249ENST00000613886 KRTAP10-8P60410 259 aa4.41□□□□□ -1.7
RUNX1T1-249ENST00000613886 CELSR2Q9HCU4 2923 aa4.41□□□□□ -1.7
RUNX1T1-249ENST00000613886 KRTAP21-3Q3LHN1 58 aa4.38□□□□□ -1.71
RUNX1T1-249ENST00000613886 FLNCQ14315 2725 aa4.38□□□□□ -1.71
RUNX1T1-249ENST00000613886 XP32Q5T750 250 aa4.38□□□□□ -1.71
RUNX1T1-249ENST00000613886 TNRC18O15417 2968 aaPredicted RBP4.34□□□□□ -1.72
RUNX1T1-249ENST00000613886 KRTAP1-4P0C5Y4 121 aa4.33□□□□□ -1.72
RUNX1T1-249ENST00000613886 DCHS2Q6V1P9 2916 aa4.33□□□□□ -1.72
RUNX1T1-249ENST00000613886 TENM4Q6N022 2769 aa4.33□□□□□ -1.72
RUNX1T1-249ENST00000613886 DMXL1Q9Y485 3027 aa4.32□□□□□ -1.72
RUNX1T1-249ENST00000613886 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
RUNX1T1-249ENST00000613886 MYO15AQ9UKN7 3530 aa4.29□□□□□ -1.72
RUNX1T1-249ENST00000613886 LOC400499M0QZD8 3231 aa4.29□□□□□ -1.72
RUNX1T1-249ENST00000613886 TENM1Q9UKZ4 2725 aa4.26□□□□□ -1.73
RUNX1T1-249ENST00000613886 H0YAA0 97 aa4.26□□□□□ -1.73
RUNX1T1-249ENST00000613886 TPRXLQ17RH7 258 aa4.26□□□□□ -1.73
RUNX1T1-249ENST00000613886 WDFY3Q8IZQ1 3526 aa4.26□□□□□ -1.73
RUNX1T1-249ENST00000613886 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
RUNX1T1-249ENST00000613886 CELSR1Q9NYQ6 3014 aa4.24□□□□□ -1.73
RUNX1T1-249ENST00000613886 ZANQ9Y493 2812 aa4.24□□□□□ -1.73
RUNX1T1-249ENST00000613886 NIPBLQ6KC79 2804 aaeCLIP4.24□□□□□ -1.73
RUNX1T1-249ENST00000613886 ASPMQ8IZT6 3477 aa4.24□□□□□ -1.73
RUNX1T1-249ENST00000613886 FBN2P35556 2912 aa4.23□□□□□ -1.73
RUNX1T1-249ENST00000613886 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.74
RUNX1T1-249ENST00000613886 NF1P21359 2839 aa4.21□□□□□ -1.74
RUNX1T1-249ENST00000613886 HRNRQ86YZ3 2850 aaPredicted RBP4.21□□□□□ -1.74
RUNX1T1-249ENST00000613886 P0C880 135 aa4.2□□□□□ -1.74
RUNX1T1-249ENST00000613886 KRTAP13-3Q3SY46 172 aa4.2□□□□□ -1.74
RUNX1T1-249ENST00000613886 DCHS1Q96JQ0 3298 aa4.18□□□□□ -1.74
RUNX1T1-249ENST00000613886 NBPF19A0A087WUL8 3843 aa4.18□□□□□ -1.74
RUNX1T1-249ENST00000613886 TENM2Q9NT68 2774 aa4.16□□□□□ -1.74
RUNX1T1-249ENST00000613886 RELNP78509 3460 aa4.14□□□□□ -1.75
RUNX1T1-249ENST00000613886 TGP01266 2768 aa4.12□□□□□ -1.75
RUNX1T1-249ENST00000613886 TENM3Q9P273 2699 aa4.11□□□□□ -1.75
RUNX1T1-249ENST00000613886 ZFHX4Q86UP3 3567 aa4.09□□□□□ -1.75
RUNX1T1-249ENST00000613886 CSMD1Q96PZ7 3565 aa4.09□□□□□ -1.75
RUNX1T1-249ENST00000613886 PKD1L1Q8TDX9 2849 aa4.09□□□□□ -1.75
RUNX1T1-249ENST00000613886 LAMA5O15230 3695 aa4.09□□□□□ -1.75
RUNX1T1-249ENST00000613886 DMDP11532 3685 aa4.07□□□□□ -1.76
RUNX1T1-249ENST00000613886 VWFP04275 2813 aa4.06□□□□□ -1.76
RUNX1T1-249ENST00000613886 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
RUNX1T1-249ENST00000613886 MXRA5Q9NR99 2828 aa4.04□□□□□ -1.76
RUNX1T1-249ENST00000613886 PDZD2O15018 2839 aa4.02□□□□□ -1.77
RUNX1T1-249ENST00000613886 MUC3AQ02505 3323 aa3.97□□□□□ -1.77
RUNX1T1-249ENST00000613886 ZFHX3Q15911 3703 aa3.96□□□□□ -1.78
RUNX1T1-249ENST00000613886 KRTAP13-4Q3LI77 160 aa3.95□□□□□ -1.78
RUNX1T1-249ENST00000613886 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
RUNX1T1-249ENST00000613886 SMG1Q96Q15 3661 aaKnown RBP3.93□□□□□ -1.78
RUNX1T1-249ENST00000613886 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
RUNX1T1-249ENST00000613886 SPENQ96T58 3664 aaKnown RBP3.88□□□□□ -1.79
RUNX1T1-249ENST00000613886 KRTAP3-1Q9BYR8 98 aa3.88□□□□□ -1.79
RUNX1T1-249ENST00000613886 SVEP1Q4LDE5 3571 aa3.87□□□□□ -1.79
RUNX1T1-249ENST00000613886 CUBNO60494 3623 aa3.85□□□□□ -1.79
RUNX1T1-249ENST00000613886 FBN1P35555 2871 aaKnown RBP3.83□□□□□ -1.8
RUNX1T1-249ENST00000613886 CSMD2Q7Z408 3487 aa3.82□□□□□ -1.8
RUNX1T1-249ENST00000613886 FBN3Q75N90 2809 aa3.79□□□□□ -1.8
RUNX1T1-249ENST00000613886 MEGF8Q7Z7M0 2845 aa3.79□□□□□ -1.8
RUNX1T1-249ENST00000613886 SRRM2Q9UQ35 2752 aaKnown RBP3.79□□□□□ -1.8
RUNX1T1-249ENST00000613886 ANK3Q12955 4377 aaKnown RBP3.79□□□□□ -1.8
RUNX1T1-249ENST00000613886 COL7A1Q02388 2944 aa3.78□□□□□ -1.8
RUNX1T1-249ENST00000613886 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
RUNX1T1-249ENST00000613886 TRRAPQ9Y4A5 3859 aa3.77□□□□□ -1.81
RUNX1T1-249ENST00000613886 KRTAP10-6P60371 365 aaPredicted RBP3.76□□□□□ -1.81
RUNX1T1-249ENST00000613886 OTOGQ6ZRI0 2925 aa3.72□□□□□ -1.81
RUNX1T1-249ENST00000613886 MT1HL1P0DM35 61 aa3.7□□□□□ -1.82
RUNX1T1-249ENST00000613886 KRTAP10-12P60413 245 aa3.68□□□□□ -1.82
RUNX1T1-249ENST00000613886 VPS13CQ709C8 3753 aa3.68□□□□□ -1.82
RUNX1T1-249ENST00000613886 BSNQ9UPA5 3926 aa3.67□□□□□ -1.82
RUNX1T1-249ENST00000613886 KRTAP4-5Q9BYR2 181 aa3.67□□□□□ -1.82
RUNX1T1-249ENST00000613886 HUWE1Q7Z6Z7 4374 aaKnown RBP3.65□□□□□ -1.83
RUNX1T1-249ENST00000613886 KRTAP3-3Q9BYR6 98 aa3.62□□□□□ -1.83
RUNX1T1-249ENST00000613886 KRTAP3-2Q9BYR7 98 aa3.61□□□□□ -1.83
RUNX1T1-249ENST00000613886 CSMD3Q7Z407 3707 aa3.6□□□□□ -1.83
RUNX1T1-249ENST00000613886 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
RUNX1T1-249ENST00000613886 INE1O15225 51 aa3.54□□□□□ -1.84
RUNX1T1-249ENST00000613886 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
RUNX1T1-249ENST00000613886 KRTAP10-4P60372 401 aaPredicted RBP3.53□□□□□ -1.84
RUNX1T1-249ENST00000613886 ALMS1Q8TCU4 4167 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms