RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 BOD1L1Q8NFC6 3051 aa8.39□□□□□ -1.07
TNXB-209ENST00000613214 LRBAP50851 2863 aa8.39□□□□□ -1.07
TNXB-209ENST00000613214 EYSQ5T1H1 3165 aa8.38□□□□□ -1.07
TNXB-209ENST00000613214 RPS29P62273 56 aaKnown RBP8.37□□□□□ -1.07
TNXB-209ENST00000613214 A6NN06 94 aa8.36□□□□□ -1.07
TNXB-209ENST00000613214 ITPR2Q14571 2701 aa8.36□□□□□ -1.07
TNXB-209ENST00000613214 ASH1LQ9NR48 2969 aaKnown RBP8.34□□□□□ -1.07
TNXB-209ENST00000613214 FRYLO94915 3013 aa8.3□□□□□ -1.08
TNXB-209ENST00000613214 IGSF10Q6WRI0 2623 aa8.3□□□□□ -1.08
TNXB-209ENST00000613214 APCP25054 2843 aa8.29□□□□□ -1.08
TNXB-209ENST00000613214 KRTAP13-1Q8IUC0 172 aa8.28□□□□□ -1.08
TNXB-209ENST00000613214 TACC2O95359 2948 aa8.28□□□□□ -1.08
TNXB-209ENST00000613214 KMT2BQ9UMN6 2715 aaPredicted RBP8.28□□□□□ -1.08
TNXB-209ENST00000613214 XP32Q5T750 250 aa8.27□□□□□ -1.09
TNXB-209ENST00000613214 ATMQ13315 3056 aa8.27□□□□□ -1.09
TNXB-209ENST00000613214 USP34Q70CQ2 3546 aa8.26□□□□□ -1.09
TNXB-209ENST00000613214 MYO15AQ9UKN7 3530 aa8.24□□□□□ -1.09
TNXB-209ENST00000613214 COL12A1Q99715 3063 aa8.23□□□□□ -1.09
TNXB-209ENST00000613214 NSD1Q96L73 2696 aaPredicted RBP8.23□□□□□ -1.09
TNXB-209ENST00000613214 HIVEP1P15822 2718 aa8.21□□□□□ -1.1
TNXB-209ENST00000613214 ADGRG4Q8IZF6 3080 aa8.2□□□□□ -1.1
TNXB-209ENST00000613214 UBR5O95071 2799 aaPredicted RBP8.2□□□□□ -1.1
TNXB-209ENST00000613214 ASPMQ8IZT6 3477 aa8.18□□□□□ -1.1
TNXB-209ENST00000613214 UTP20O75691 2785 aaKnown RBP8.16□□□□□ -1.1
TNXB-209ENST00000613214 P0C880 135 aa8.14□□□□□ -1.11
TNXB-209ENST00000613214 NBEAQ8NFP9 2946 aa8.11□□□□□ -1.11
TNXB-209ENST00000613214 WDFY3Q8IZQ1 3526 aa8.07□□□□□ -1.12
TNXB-209ENST00000613214 PRO2289Q9P1D8 64 aa8.06□□□□□ -1.12
TNXB-209ENST00000613214 ITPR1Q14643 2758 aa8.06□□□□□ -1.12
TNXB-209ENST00000613214 TNRC18O15417 2968 aaPredicted RBP8.04□□□□□ -1.12
TNXB-209ENST00000613214 KRTAP1-4P0C5Y4 121 aa8.04□□□□□ -1.12
TNXB-209ENST00000613214 H0YAA0 97 aa8.04□□□□□ -1.12
TNXB-209ENST00000613214 LOC400499M0QZD8 3231 aa8.03□□□□□ -1.12
TNXB-209ENST00000613214 DMXL1Q9Y485 3027 aa8.02□□□□□ -1.13
TNXB-209ENST00000613214 DCHS1Q96JQ0 3298 aa8.01□□□□□ -1.13
TNXB-209ENST00000613214 ZZEF1O43149 2961 aa8.01□□□□□ -1.13
TNXB-209ENST00000613214 KRTAP21-3Q3LHN1 58 aa7.99□□□□□ -1.13
TNXB-209ENST00000613214 PP632Q6XCG6 107 aa7.94□□□□□ -1.14
TNXB-209ENST00000613214 FLNCQ14315 2725 aa7.94□□□□□ -1.14
TNXB-209ENST00000613214 TPRXLQ17RH7 258 aa7.92□□□□□ -1.14
TNXB-209ENST00000613214 CELSR2Q9HCU4 2923 aa7.91□□□□□ -1.14
TNXB-209ENST00000613214 NBPF19A0A087WUL8 3843 aa7.89□□□□□ -1.15
TNXB-209ENST00000613214 KRTAP13-3Q3SY46 172 aa7.83□□□□□ -1.16
TNXB-209ENST00000613214 ZFHX4Q86UP3 3567 aa7.83□□□□□ -1.16
TNXB-209ENST00000613214 TENM4Q6N022 2769 aa7.79□□□□□ -1.16
TNXB-209ENST00000613214 RELNP78509 3460 aa7.79□□□□□ -1.16
TNXB-209ENST00000613214 LAMA5O15230 3695 aa7.77□□□□□ -1.17
TNXB-209ENST00000613214 CSMD1Q96PZ7 3565 aa7.76□□□□□ -1.17
TNXB-209ENST00000613214 DCHS2Q6V1P9 2916 aa7.75□□□□□ -1.17
TNXB-209ENST00000613214 KRTAP12-2P59991 146 aa7.73□□□□□ -1.17
TNXB-209ENST00000613214 CRCT1Q9UGL9 99 aa7.71□□□□□ -1.18
TNXB-209ENST00000613214 CELSR1Q9NYQ6 3014 aa7.71□□□□□ -1.18
TNXB-209ENST00000613214 TENM1Q9UKZ4 2725 aa7.71□□□□□ -1.18
TNXB-209ENST00000613214 TENM2Q9NT68 2774 aa7.68□□□□□ -1.18
TNXB-209ENST00000613214 ZANQ9Y493 2812 aa7.67□□□□□ -1.18
TNXB-209ENST00000613214 FBN2P35556 2912 aa7.6□□□□□ -1.19
TNXB-209ENST00000613214 HRNRQ86YZ3 2850 aaPredicted RBP7.6□□□□□ -1.19
TNXB-209ENST00000613214 DMDP11532 3685 aa7.57□□□□□ -1.2
TNXB-209ENST00000613214 KRTAP15-1Q3LI76 137 aa7.54□□□□□ -1.2
TNXB-209ENST00000613214 NF1P21359 2839 aa7.53□□□□□ -1.2
TNXB-209ENST00000613214 NIPBLQ6KC79 2804 aaeCLIP7.5□□□□□ -1.21
TNXB-209ENST00000613214 TGP01266 2768 aa7.49□□□□□ -1.21
TNXB-209ENST00000613214 VWFP04275 2813 aa7.47□□□□□ -1.21
TNXB-209ENST00000613214 PKD1L1Q8TDX9 2849 aa7.47□□□□□ -1.21
TNXB-209ENST00000613214 SMG1Q96Q15 3661 aaKnown RBP7.41□□□□□ -1.22
TNXB-209ENST00000613214 KRTAP13-4Q3LI77 160 aa7.41□□□□□ -1.22
TNXB-209ENST00000613214 KRTAP12-1P59990 96 aa7.38□□□□□ -1.23
TNXB-209ENST00000613214 SPENQ96T58 3664 aaKnown RBP7.37□□□□□ -1.23
TNXB-209ENST00000613214 CUBNO60494 3623 aa7.36□□□□□ -1.23
TNXB-209ENST00000613214 ZFHX3Q15911 3703 aa7.36□□□□□ -1.23
TNXB-209ENST00000613214 MUC3AQ02505 3323 aa7.36□□□□□ -1.23
TNXB-209ENST00000613214 TENM3Q9P273 2699 aa7.36□□□□□ -1.23
TNXB-209ENST00000613214 SVEP1Q4LDE5 3571 aa7.31□□□□□ -1.24
TNXB-209ENST00000613214 PDZD2O15018 2839 aa7.29□□□□□ -1.24
TNXB-209ENST00000613214 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
TNXB-209ENST00000613214 CSMD2Q7Z408 3487 aa7.19□□□□□ -1.26
TNXB-209ENST00000613214 MXRA5Q9NR99 2828 aa7.19□□□□□ -1.26
TNXB-209ENST00000613214 KRTAP4-5Q9BYR2 181 aa7.04□□□□□ -1.28
TNXB-209ENST00000613214 KRTAP10-12P60413 245 aa7.02□□□□□ -1.29
TNXB-209ENST00000613214 FBN1P35555 2871 aaKnown RBP7□□□□□ -1.29
TNXB-209ENST00000613214 ANK3Q12955 4377 aaKnown RBP6.94□□□□□ -1.3
TNXB-209ENST00000613214 KRTAP10-6P60371 365 aaPredicted RBP6.93□□□□□ -1.3
TNXB-209ENST00000613214 TRRAPQ9Y4A5 3859 aa6.9□□□□□ -1.3
TNXB-209ENST00000613214 LORP23490 312 aaPredicted RBP6.9□□□□□ -1.3
TNXB-209ENST00000613214 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.31
TNXB-209ENST00000613214 BSNQ9UPA5 3926 aa6.89□□□□□ -1.31
TNXB-209ENST00000613214 CSMD3Q7Z407 3707 aa6.89□□□□□ -1.31
TNXB-209ENST00000613214 OTOGQ6ZRI0 2925 aa6.87□□□□□ -1.31
TNXB-209ENST00000613214 VPS13CQ709C8 3753 aa6.84□□□□□ -1.31
TNXB-209ENST00000613214 MEGF8Q7Z7M0 2845 aa6.83□□□□□ -1.32
TNXB-209ENST00000613214 MT1HL1P0DM35 61 aa6.82□□□□□ -1.32
TNXB-209ENST00000613214 COL7A1Q02388 2944 aa6.81□□□□□ -1.32
TNXB-209ENST00000613214 KRTAP10-5P60370 271 aa6.8□□□□□ -1.32
TNXB-209ENST00000613214 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
TNXB-209ENST00000613214 FBN3Q75N90 2809 aa6.79□□□□□ -1.32
TNXB-209ENST00000613214 INE1O15225 51 aa6.77□□□□□ -1.33
TNXB-209ENST00000613214 HUWE1Q7Z6Z7 4374 aaKnown RBP6.75□□□□□ -1.33
TNXB-209ENST00000613214 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
TNXB-209ENST00000613214 KRTAP3-3Q9BYR6 98 aa6.68□□□□□ -1.34
TNXB-209ENST00000613214 KRTAP8-1Q8IUC2 63 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms