RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
CNTNAP3B-211ENST00000612828 EYSQ5T1H1 3165 aa6.26□□□□□ -1.41
CNTNAP3B-211ENST00000612828 KRTAP1-5Q9BYS1 174 aa6.25□□□□□ -1.41
CNTNAP3B-211ENST00000612828 KRTAP10-1P60331 282 aa6.25□□□□□ -1.41
CNTNAP3B-211ENST00000612828 UTP20O75691 2785 aaKnown RBP6.25□□□□□ -1.41
CNTNAP3B-211ENST00000612828 KRTAP10-2P60368 255 aa6.23□□□□□ -1.41
CNTNAP3B-211ENST00000612828 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
CNTNAP3B-211ENST00000612828 MYO15AQ9UKN7 3530 aa6.21□□□□□ -1.42
CNTNAP3B-211ENST00000612828 KRTAP4-16G5E9R7 235 aaPredicted RBP6.2□□□□□ -1.42
CNTNAP3B-211ENST00000612828 ZANQ9Y493 2812 aa6.19□□□□□ -1.42
CNTNAP3B-211ENST00000612828 LINC00472Q9H8W2 130 aa6.18□□□□□ -1.42
CNTNAP3B-211ENST00000612828 CRCT1Q9UGL9 99 aa6.18□□□□□ -1.42
CNTNAP3B-211ENST00000612828 SPTBN5Q9NRC6 3674 aaKnown RBP6.18□□□□□ -1.42
CNTNAP3B-211ENST00000612828 HIVEP1P15822 2718 aa6.18□□□□□ -1.42
CNTNAP3B-211ENST00000612828 USP34Q70CQ2 3546 aa6.17□□□□□ -1.42
CNTNAP3B-211ENST00000612828 LCE6AA0A183 80 aa6.15□□□□□ -1.43
CNTNAP3B-211ENST00000612828 CRYBG3Q68DQ2 2970 aa6.14□□□□□ -1.43
CNTNAP3B-211ENST00000612828 LOC400499M0QZD8 3231 aa6.14□□□□□ -1.43
CNTNAP3B-211ENST00000612828 CELSR2Q9HCU4 2923 aa6.13□□□□□ -1.43
CNTNAP3B-211ENST00000612828 KMT2BQ9UMN6 2715 aaPredicted RBP6.09□□□□□ -1.44
CNTNAP3B-211ENST00000612828 KRTAP11-1Q8IUC1 163 aa6.08□□□□□ -1.44
CNTNAP3B-211ENST00000612828 KRTAP7-1Q8IUC3 87 aa6.08□□□□□ -1.44
CNTNAP3B-211ENST00000612828 ITPR2Q14571 2701 aa6.07□□□□□ -1.44
CNTNAP3B-211ENST00000612828 DMXL1Q9Y485 3027 aa6.07□□□□□ -1.44
CNTNAP3B-211ENST00000612828 KRTAP29-1A8MX34 341 aaPredicted RBP6.07□□□□□ -1.44
CNTNAP3B-211ENST00000612828 A0A087X002 238 aa6.07□□□□□ -1.44
CNTNAP3B-211ENST00000612828 TNRC18O15417 2968 aaPredicted RBP6.06□□□□□ -1.44
CNTNAP3B-211ENST00000612828 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
CNTNAP3B-211ENST00000612828 NIPBLQ6KC79 2804 aaeCLIP6.05□□□□□ -1.44
CNTNAP3B-211ENST00000612828 DCHS2Q6V1P9 2916 aa6.04□□□□□ -1.44
CNTNAP3B-211ENST00000612828 HRNRQ86YZ3 2850 aaPredicted RBP6.01□□□□□ -1.45
CNTNAP3B-211ENST00000612828 FBN2P35556 2912 aa6.01□□□□□ -1.45
CNTNAP3B-211ENST00000612828 NF1P21359 2839 aa6.01□□□□□ -1.45
CNTNAP3B-211ENST00000612828 DCHS1Q96JQ0 3298 aa5.97□□□□□ -1.45
CNTNAP3B-211ENST00000612828 APCP25054 2843 aa5.96□□□□□ -1.45
CNTNAP3B-211ENST00000612828 RELNP78509 3460 aa5.92□□□□□ -1.46
CNTNAP3B-211ENST00000612828 Q6ZRN7 208 aaPredicted RBP5.91□□□□□ -1.46
CNTNAP3B-211ENST00000612828 WDFY3Q8IZQ1 3526 aa5.9□□□□□ -1.47
CNTNAP3B-211ENST00000612828 TENM4Q6N022 2769 aa5.9□□□□□ -1.47
CNTNAP3B-211ENST00000612828 ZFHX4Q86UP3 3567 aa5.88□□□□□ -1.47
CNTNAP3B-211ENST00000612828 KRTAP12-2P59991 146 aa5.87□□□□□ -1.47
CNTNAP3B-211ENST00000612828 ASB16-AS1Q495Z4 193 aa5.86□□□□□ -1.47
CNTNAP3B-211ENST00000612828 ASPMQ8IZT6 3477 aa5.86□□□□□ -1.47
CNTNAP3B-211ENST00000612828 A6NN06 94 aa5.85□□□□□ -1.47
CNTNAP3B-211ENST00000612828 MXRA5Q9NR99 2828 aa5.83□□□□□ -1.48
CNTNAP3B-211ENST00000612828 KRTAP10-6P60371 365 aaPredicted RBP5.8□□□□□ -1.48
CNTNAP3B-211ENST00000612828 KRTAP13-1Q8IUC0 172 aa5.79□□□□□ -1.48
CNTNAP3B-211ENST00000612828 RPS29P62273 56 aaKnown RBP5.78□□□□□ -1.48
CNTNAP3B-211ENST00000612828 CELSR1Q9NYQ6 3014 aa5.77□□□□□ -1.49
CNTNAP3B-211ENST00000612828 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
CNTNAP3B-211ENST00000612828 LAMA5O15230 3695 aa5.76□□□□□ -1.49
CNTNAP3B-211ENST00000612828 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
CNTNAP3B-211ENST00000612828 TENM3Q9P273 2699 aa5.74□□□□□ -1.49
CNTNAP3B-211ENST00000612828 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
CNTNAP3B-211ENST00000612828 MUC3AQ02505 3323 aa5.69□□□□□ -1.5
CNTNAP3B-211ENST00000612828 H0YAA0 97 aa5.68□□□□□ -1.5
CNTNAP3B-211ENST00000612828 CSMD1Q96PZ7 3565 aa5.66□□□□□ -1.5
CNTNAP3B-211ENST00000612828 PDZD2O15018 2839 aa5.65□□□□□ -1.51
CNTNAP3B-211ENST00000612828 TENM1Q9UKZ4 2725 aa5.65□□□□□ -1.51
CNTNAP3B-211ENST00000612828 SMG1Q96Q15 3661 aaKnown RBP5.64□□□□□ -1.51
CNTNAP3B-211ENST00000612828 DMDP11532 3685 aa5.64□□□□□ -1.51
CNTNAP3B-211ENST00000612828 CUBNO60494 3623 aa5.6□□□□□ -1.51
CNTNAP3B-211ENST00000612828 VWFP04275 2813 aa5.6□□□□□ -1.51
CNTNAP3B-211ENST00000612828 FBN1P35555 2871 aaKnown RBP5.58□□□□□ -1.52
CNTNAP3B-211ENST00000612828 SVEP1Q4LDE5 3571 aa5.58□□□□□ -1.52
CNTNAP3B-211ENST00000612828 XP32Q5T750 250 aa5.56□□□□□ -1.52
CNTNAP3B-211ENST00000612828 PKD1L1Q8TDX9 2849 aa5.53□□□□□ -1.52
CNTNAP3B-211ENST00000612828 TENM2Q9NT68 2774 aa5.52□□□□□ -1.53
CNTNAP3B-211ENST00000612828 KRTAP1-4P0C5Y4 121 aa5.49□□□□□ -1.53
CNTNAP3B-211ENST00000612828 TGP01266 2768 aa5.47□□□□□ -1.53
CNTNAP3B-211ENST00000612828 OTOGQ6ZRI0 2925 aa5.42□□□□□ -1.54
CNTNAP3B-211ENST00000612828 KRTAP10-5P60370 271 aa5.4□□□□□ -1.55
CNTNAP3B-211ENST00000612828 CSMD2Q7Z408 3487 aa5.38□□□□□ -1.55
CNTNAP3B-211ENST00000612828 KRTAP13-3Q3SY46 172 aa5.36□□□□□ -1.55
CNTNAP3B-211ENST00000612828 SRRM2Q9UQ35 2752 aaKnown RBP5.34□□□□□ -1.55
CNTNAP3B-211ENST00000612828 LORP23490 312 aaPredicted RBP5.31□□□□□ -1.56
CNTNAP3B-211ENST00000612828 SPENQ96T58 3664 aaKnown RBP5.3□□□□□ -1.56
CNTNAP3B-211ENST00000612828 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
CNTNAP3B-211ENST00000612828 NBPF19A0A087WUL8 3843 aa5.26□□□□□ -1.57
CNTNAP3B-211ENST00000612828 FBN3Q75N90 2809 aa5.24□□□□□ -1.57
CNTNAP3B-211ENST00000612828 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
CNTNAP3B-211ENST00000612828 ZFHX3Q15911 3703 aa5.22□□□□□ -1.57
CNTNAP3B-211ENST00000612828 ANK3Q12955 4377 aaKnown RBP5.15□□□□□ -1.58
CNTNAP3B-211ENST00000612828 INE1O15225 51 aa5.15□□□□□ -1.59
CNTNAP3B-211ENST00000612828 KRTAP3-1Q9BYR8 98 aa5.14□□□□□ -1.59
CNTNAP3B-211ENST00000612828 TRRAPQ9Y4A5 3859 aa5.1□□□□□ -1.59
CNTNAP3B-211ENST00000612828 MEGF8Q7Z7M0 2845 aa5.09□□□□□ -1.59
CNTNAP3B-211ENST00000612828 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
CNTNAP3B-211ENST00000612828 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
CNTNAP3B-211ENST00000612828 COL7A1Q02388 2944 aa4.98□□□□□ -1.61
CNTNAP3B-211ENST00000612828 BSNQ9UPA5 3926 aa4.95□□□□□ -1.62
CNTNAP3B-211ENST00000612828 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
CNTNAP3B-211ENST00000612828 KRTAP21-3Q3LHN1 58 aa4.92□□□□□ -1.62
CNTNAP3B-211ENST00000612828 VPS13CQ709C8 3753 aa4.87□□□□□ -1.63
CNTNAP3B-211ENST00000612828 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
CNTNAP3B-211ENST00000612828 CSMD3Q7Z407 3707 aa4.82□□□□□ -1.64
CNTNAP3B-211ENST00000612828 KRTAP3-2Q9BYR7 98 aa4.81□□□□□ -1.64
CNTNAP3B-211ENST00000612828 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
CNTNAP3B-211ENST00000612828 KRTAP3-3Q9BYR6 98 aa4.79□□□□□ -1.64
CNTNAP3B-211ENST00000612828 HUWE1Q7Z6Z7 4374 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms