RNA–Protein interactions for RNA: ENST00000612482.4

SREBF2-209, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 5 BASIC

Gene SREBF2, Length 5,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-209ENST00000612482 VCANP13611 3396 aa10.56□□□□□ -0.72
SREBF2-209ENST00000612482 C20orf166-AS1Q96NR2 134 aa10.56□□□□□ -0.72
SREBF2-209ENST00000612482 COL12A1Q99715 3063 aa10.55□□□□□ -0.72
SREBF2-209ENST00000612482 ADGRG4Q8IZF6 3080 aa10.54□□□□□ -0.72
SREBF2-209ENST00000612482 LRBAP50851 2863 aa10.53□□□□□ -0.72
SREBF2-209ENST00000612482 LAMA1P25391 3075 aa10.51□□□□□ -0.73
SREBF2-209ENST00000612482 REV3LO60673 3130 aa10.5□□□□□ -0.73
SREBF2-209ENST00000612482 DNAH14Q0VDD8 3507 aa10.47□□□□□ -0.73
SREBF2-209ENST00000612482 BOD1L1Q8NFC6 3051 aa10.47□□□□□ -0.73
SREBF2-209ENST00000612482 FRYLO94915 3013 aa10.45□□□□□ -0.74
SREBF2-209ENST00000612482 SZT2Q5T011 3432 aa10.4□□□□□ -0.74
SREBF2-209ENST00000612482 CELSR2Q9HCU4 2923 aa10.39□□□□□ -0.75
SREBF2-209ENST00000612482 NIPBLQ6KC79 2804 aaeCLIP10.38□□□□□ -0.75
SREBF2-209ENST00000612482 KMT2BQ9UMN6 2715 aaPredicted RBP10.37□□□□□ -0.75
SREBF2-209ENST00000612482 TNP1P09430 55 aa10.36□□□□□ -0.75
SREBF2-209ENST00000612482 COL6A3P12111 3177 aa10.35□□□□□ -0.75
SREBF2-209ENST00000612482 CFAP47Q6ZTR5 3102 aa10.34□□□□□ -0.75
SREBF2-209ENST00000612482 ZZEF1O43149 2961 aa10.32□□□□□ -0.76
SREBF2-209ENST00000612482 C10orf95Q9H7T3 257 aa10.31□□□□□ -0.76
SREBF2-209ENST00000612482 CRYBG3Q68DQ2 2970 aa10.3□□□□□ -0.76
SREBF2-209ENST00000612482 TENM4Q6N022 2769 aa10.29□□□□□ -0.76
SREBF2-209ENST00000612482 KRTAP1-4P0C5Y4 121 aa10.24□□□□□ -0.77
SREBF2-209ENST00000612482 DCHS2Q6V1P9 2916 aa10.23□□□□□ -0.77
SREBF2-209ENST00000612482 H0YAA0 97 aa10.21□□□□□ -0.78
SREBF2-209ENST00000612482 XP32Q5T750 250 aa10.16□□□□□ -0.78
SREBF2-209ENST00000612482 ZANQ9Y493 2812 aa10.15□□□□□ -0.78
SREBF2-209ENST00000612482 PP632Q6XCG6 107 aa10.09□□□□□ -0.79
SREBF2-209ENST00000612482 EYSQ5T1H1 3165 aa10.08□□□□□ -0.8
SREBF2-209ENST00000612482 KRTAP10-8P60410 259 aa10.02□□□□□ -0.81
SREBF2-209ENST00000612482 P0C880 135 aa10.01□□□□□ -0.81
SREBF2-209ENST00000612482 A0A1B0GVY2 172 aa10.01□□□□□ -0.81
SREBF2-209ENST00000612482 SPEGQ15772 3267 aa9.99□□□□□ -0.81
SREBF2-209ENST00000612482 TENM3Q9P273 2699 aa9.96□□□□□ -0.81
SREBF2-209ENST00000612482 FBN2P35556 2912 aa9.95□□□□□ -0.82
SREBF2-209ENST00000612482 TNRC18O15417 2968 aaPredicted RBP9.95□□□□□ -0.82
SREBF2-209ENST00000612482 HRNRQ86YZ3 2850 aaPredicted RBP9.92□□□□□ -0.82
SREBF2-209ENST00000612482 USP34Q70CQ2 3546 aa9.88□□□□□ -0.83
SREBF2-209ENST00000612482 KRTAP21-3Q3LHN1 58 aa9.88□□□□□ -0.83
SREBF2-209ENST00000612482 NF1P21359 2839 aa9.87□□□□□ -0.83
SREBF2-209ENST00000612482 TENM1Q9UKZ4 2725 aa9.86□□□□□ -0.83
SREBF2-209ENST00000612482 TPRXLQ17RH7 258 aa9.84□□□□□ -0.83
SREBF2-209ENST00000612482 TGP01266 2768 aa9.82□□□□□ -0.84
SREBF2-209ENST00000612482 SPTBN5Q9NRC6 3674 aaKnown RBP9.8□□□□□ -0.84
SREBF2-209ENST00000612482 KRTAP13-3Q3SY46 172 aa9.77□□□□□ -0.85
SREBF2-209ENST00000612482 DMXL1Q9Y485 3027 aa9.76□□□□□ -0.85
SREBF2-209ENST00000612482 LOC400499M0QZD8 3231 aa9.72□□□□□ -0.85
SREBF2-209ENST00000612482 KRTAP10-10P60014 251 aa9.71□□□□□ -0.86
SREBF2-209ENST00000612482 CELSR1Q9NYQ6 3014 aa9.69□□□□□ -0.86
SREBF2-209ENST00000612482 TENM2Q9NT68 2774 aa9.68□□□□□ -0.86
SREBF2-209ENST00000612482 MYO15AQ9UKN7 3530 aa9.66□□□□□ -0.86
SREBF2-209ENST00000612482 KRTAP12-2P59991 146 aa9.57□□□□□ -0.88
SREBF2-209ENST00000612482 PRO2289Q9P1D8 64 aa9.53□□□□□ -0.88
SREBF2-209ENST00000612482 PKD1L1Q8TDX9 2849 aa9.53□□□□□ -0.88
SREBF2-209ENST00000612482 MXRA5Q9NR99 2828 aa9.53□□□□□ -0.88
SREBF2-209ENST00000612482 PDZD2O15018 2839 aa9.44□□□□□ -0.9
SREBF2-209ENST00000612482 WDFY3Q8IZQ1 3526 aa9.43□□□□□ -0.9
SREBF2-209ENST00000612482 VWFP04275 2813 aa9.43□□□□□ -0.9
SREBF2-209ENST00000612482 KRTAP12-1P59990 96 aa9.37□□□□□ -0.91
SREBF2-209ENST00000612482 RELNP78509 3460 aa9.36□□□□□ -0.91
SREBF2-209ENST00000612482 KRTAP13-4Q3LI77 160 aa9.34□□□□□ -0.91
SREBF2-209ENST00000612482 KRTAP3-1Q9BYR8 98 aa9.34□□□□□ -0.91
SREBF2-209ENST00000612482 DCHS1Q96JQ0 3298 aa9.32□□□□□ -0.92
SREBF2-209ENST00000612482 ZFHX4Q86UP3 3567 aa9.14□□□□□ -0.95
SREBF2-209ENST00000612482 FBN1P35555 2871 aaKnown RBP9.1□□□□□ -0.95
SREBF2-209ENST00000612482 ASPMQ8IZT6 3477 aa9.1□□□□□ -0.95
SREBF2-209ENST00000612482 KRTAP10-6P60371 365 aaPredicted RBP9.09□□□□□ -0.95
SREBF2-209ENST00000612482 SRRM2Q9UQ35 2752 aaKnown RBP9.06□□□□□ -0.96
SREBF2-209ENST00000612482 CSMD1Q96PZ7 3565 aa9.04□□□□□ -0.96
SREBF2-209ENST00000612482 LAMA5O15230 3695 aa8.98□□□□□ -0.97
SREBF2-209ENST00000612482 FBN3Q75N90 2809 aa8.97□□□□□ -0.97
SREBF2-209ENST00000612482 KRTAP15-1Q3LI76 137 aa8.95□□□□□ -0.98
SREBF2-209ENST00000612482 NBPF19A0A087WUL8 3843 aa8.93□□□□□ -0.98
SREBF2-209ENST00000612482 MEGF8Q7Z7M0 2845 aa8.88□□□□□ -0.99
SREBF2-209ENST00000612482 OTOGQ6ZRI0 2925 aa8.81□□□□□ -1
SREBF2-209ENST00000612482 SMG1Q96Q15 3661 aaKnown RBP8.8□□□□□ -1
SREBF2-209ENST00000612482 ZFHX3Q15911 3703 aa8.76□□□□□ -1.01
SREBF2-209ENST00000612482 KRTAP3-2Q9BYR7 98 aa8.75□□□□□ -1.01
SREBF2-209ENST00000612482 COL7A1Q02388 2944 aa8.74□□□□□ -1.01
SREBF2-209ENST00000612482 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
SREBF2-209ENST00000612482 SVEP1Q4LDE5 3571 aa8.69□□□□□ -1.02
SREBF2-209ENST00000612482 CUBNO60494 3623 aa8.67□□□□□ -1.02
SREBF2-209ENST00000612482 ANK3Q12955 4377 aaKnown RBP8.65□□□□□ -1.03
SREBF2-209ENST00000612482 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
SREBF2-209ENST00000612482 DMDP11532 3685 aa8.58□□□□□ -1.04
SREBF2-209ENST00000612482 CSMD2Q7Z408 3487 aa8.54□□□□□ -1.04
SREBF2-209ENST00000612482 INE1O15225 51 aa8.53□□□□□ -1.04
SREBF2-209ENST00000612482 TRRAPQ9Y4A5 3859 aa8.51□□□□□ -1.05
SREBF2-209ENST00000612482 KRTAP10-12P60413 245 aa8.49□□□□□ -1.05
SREBF2-209ENST00000612482 MUC3AQ02505 3323 aa8.43□□□□□ -1.06
SREBF2-209ENST00000612482 SPENQ96T58 3664 aaKnown RBP8.41□□□□□ -1.06
SREBF2-209ENST00000612482 KRTAP10-4P60372 401 aaPredicted RBP8.4□□□□□ -1.06
SREBF2-209ENST00000612482 CRCT1Q9UGL9 99 aa8.39□□□□□ -1.07
SREBF2-209ENST00000612482 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
SREBF2-209ENST00000612482 KRTAP4-5Q9BYR2 181 aa8.29□□□□□ -1.08
SREBF2-209ENST00000612482 HUWE1Q7Z6Z7 4374 aaKnown RBP8.25□□□□□ -1.09
SREBF2-209ENST00000612482 LCE3AQ5TA76 89 aa8.25□□□□□ -1.09
SREBF2-209ENST00000612482 LORP23490 312 aaPredicted RBP8.23□□□□□ -1.09
SREBF2-209ENST00000612482 KRTAP23-1A1A580 65 aa8.19□□□□□ -1.1
SREBF2-209ENST00000612482 BSNQ9UPA5 3926 aa8.11□□□□□ -1.11
SREBF2-209ENST00000612482 VPS13CQ709C8 3753 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms