RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 LIMD2Q9BT23 127 aa12.45□□□□□ -0.42
USF2-216ENST00000607959 J3KT08 172 aa12.43□□□□□ -0.42
USF2-216ENST00000607959 A8MWP4 228 aa12.41□□□□□ -0.42
USF2-216ENST00000607959 DMBT1Q9UGM3 2413 aaPredicted RBP12.39□□□□□ -0.43
USF2-216ENST00000607959 PRR15Q8IV56 129 aa12.39□□□□□ -0.43
USF2-216ENST00000607959 ATOX1O00244 68 aa12.37□□□□□ -0.43
USF2-216ENST00000607959 OXTP01178 125 aa12.35□□□□□ -0.43
USF2-216ENST00000607959 A0A1B0GVX0 72 aa12.31□□□□□ -0.44
USF2-216ENST00000607959 CCDC179H3BU77 68 aa12.31□□□□□ -0.44
USF2-216ENST00000607959 NOTCH2NLQ7Z3S9 236 aa12.31□□□□□ -0.44
USF2-216ENST00000607959 KRTAP29-1A8MX34 341 aaPredicted RBP12.29□□□□□ -0.44
USF2-216ENST00000607959 NDUFB1O75438 58 aa12.29□□□□□ -0.44
USF2-216ENST00000607959 RETNLBQ9BQ08 111 aa12.29□□□□□ -0.44
USF2-216ENST00000607959 IGHV6-1A0A0B4J1U7 121 aa12.28□□□□□ -0.44
USF2-216ENST00000607959 MMP24-AS1A0A0U1RRL7 71 aa12.27□□□□□ -0.45
USF2-216ENST00000607959 HCG22E2RYF7 251 aa12.25□□□□□ -0.45
USF2-216ENST00000607959 C8orf17Q9NRJ1 99 aa12.24□□□□□ -0.45
USF2-216ENST00000607959 COX7CP15954 63 aa12.23□□□□□ -0.45
USF2-216ENST00000607959 SERP2Q8N6R1 65 aa12.23□□□□□ -0.45
USF2-216ENST00000607959 WFDC13Q8IUB5 93 aa12.23□□□□□ -0.45
USF2-216ENST00000607959 UQCRQO14949 82 aa12.2□□□□□ -0.46
USF2-216ENST00000607959 PCLOQ9Y6V0 5065 aa12.17□□□□□ -0.46
USF2-216ENST00000607959 CASC2Q6XLA1 102 aa12.17□□□□□ -0.46
USF2-216ENST00000607959 TRAV7A0A075B6U4 112 aa12.15□□□□□ -0.46
USF2-216ENST00000607959 SMIM20Q8N5G0 67 aa12.15□□□□□ -0.46
USF2-216ENST00000607959 hDV103S1A0JD37 113 aa12.15□□□□□ -0.46
USF2-216ENST00000607959 C8orf87E5RJ46 101 aa12.13□□□□□ -0.47
USF2-216ENST00000607959 LINC00313P59037 77 aa12.12□□□□□ -0.47
USF2-216ENST00000607959 KRTAP16-1A8MUX0 517 aa12.11□□□□□ -0.47
USF2-216ENST00000607959 OCR1Q9BZK8 76 aa12.1□□□□□ -0.47
USF2-216ENST00000607959 TMEM254Q8TBM7 123 aa12.08□□□□□ -0.48
USF2-216ENST00000607959 MRPL34Q9BQ48 92 aaKnown RBP12.06□□□□□ -0.48
USF2-216ENST00000607959 J3QL48 77 aa12.04□□□□□ -0.48
USF2-216ENST00000607959 FP248Q71RG6 208 aaPredicted RBP12.04□□□□□ -0.48
USF2-216ENST00000607959 C9orf92A6NGG3 77 aa12.03□□□□□ -0.48
USF2-216ENST00000607959 CYSTM1Q9H1C7 97 aa12□□□□□ -0.49
USF2-216ENST00000607959 IGLV7-46A0A075B6I9 117 aa11.98□□□□□ -0.49
USF2-216ENST00000607959 Q8N9P0 234 aaPredicted RBP11.98□□□□□ -0.49
USF2-216ENST00000607959 C20orf197Q8N268 126 aa11.97□□□□□ -0.49
USF2-216ENST00000607959 NDUFS5O43920 106 aa11.93□□□□□ -0.5
USF2-216ENST00000607959 PRR4Q16378 134 aa11.93□□□□□ -0.5
USF2-216ENST00000607959 KRTAP13-3Q3SY46 172 aa11.93□□□□□ -0.5
USF2-216ENST00000607959 KLKP1Q107X0 134 aa11.92□□□□□ -0.5
USF2-216ENST00000607959 Q5W150 140 aa11.87□□□□□ -0.51
USF2-216ENST00000607959 TP53AIP1Q9HCN2 124 aa11.87□□□□□ -0.51
USF2-216ENST00000607959 SNURFQ9Y675 71 aa11.87□□□□□ -0.51
USF2-216ENST00000607959 C20orf166-AS1Q96NR2 134 aa11.86□□□□□ -0.51
USF2-216ENST00000607959 HERC1Q15751 4861 aa11.86□□□□□ -0.51
USF2-216ENST00000607959 LPAP08519 4548 aa11.86□□□□□ -0.51
USF2-216ENST00000607959 A0A0U1RQV1 116 aa11.86□□□□□ -0.51
USF2-216ENST00000607959 A8MUU9 505 aa11.86□□□□□ -0.51
USF2-216ENST00000607959 C5orf47Q569G3 176 aa11.84□□□□□ -0.51
USF2-216ENST00000607959 XP32Q5T750 250 aa11.81□□□□□ -0.52
USF2-216ENST00000607959 H7BZZ5 65 aa11.8□□□□□ -0.52
USF2-216ENST00000607959 TPRXLQ17RH7 258 aa11.8□□□□□ -0.52
USF2-216ENST00000607959 TRAV22A0A0B4J277 110 aa11.79□□□□□ -0.52
USF2-216ENST00000607959 H0Y9P7 68 aa11.78□□□□□ -0.52
USF2-216ENST00000607959 RPS28P62857 69 aaKnown RBP11.78□□□□□ -0.52
USF2-216ENST00000607959 ZCCHC13Q8WW36 166 aaKnown RBP11.77□□□□□ -0.53
USF2-216ENST00000607959 Q75L30 129 aa11.76□□□□□ -0.53
USF2-216ENST00000607959 TMEM258P61165 79 aa11.76□□□□□ -0.53
USF2-216ENST00000607959 LRP2P98164 4655 aa11.75□□□□□ -0.53
USF2-216ENST00000607959 NDUFC1O43677 76 aa11.74□□□□□ -0.53
USF2-216ENST00000607959 LINC00208Q96KT6 92 aa11.71□□□□□ -0.53
USF2-216ENST00000607959 MP68P56378 58 aa11.7□□□□□ -0.54
USF2-216ENST00000607959 RPL37P61927 97 aaKnown RBP11.69□□□□□ -0.54
USF2-216ENST00000607959 HMCN2Q8NDA2 5059 aa11.69□□□□□ -0.54
USF2-216ENST00000607959 H3BPC8 53 aa11.66□□□□□ -0.54
USF2-216ENST00000607959 C1orf64Q8NEQ6 169 aa11.66□□□□□ -0.54
USF2-216ENST00000607959 FAM236DA0A1B0GTK5 79 aa11.6□□□□□ -0.55
USF2-216ENST00000607959 FAM236CP0DP71 79 aa11.6□□□□□ -0.55
USF2-216ENST00000607959 IGKV2-30P06310 120 aa11.58□□□□□ -0.56
USF2-216ENST00000607959 LOC101927531A0A1B0GV80 90 aa11.56□□□□□ -0.56
USF2-216ENST00000607959 CYP4F30PQ9H0H9 118 aa11.56□□□□□ -0.56
USF2-216ENST00000607959 ATP11AUNQ6ZP68 121 aa11.55□□□□□ -0.56
USF2-216ENST00000607959 IGKV2D-30A0A075B6S6 120 aa11.52□□□□□ -0.57
USF2-216ENST00000607959 ATP5EP56381 51 aaPredicted RBP11.5□□□□□ -0.57
USF2-216ENST00000607959 PCOTHQ58A44 107 aa11.5□□□□□ -0.57
USF2-216ENST00000607959 MUC17Q685J3 4493 aa11.45□□□□□ -0.58
USF2-216ENST00000607959 C7orf65Q6ZTY9 151 aa11.45□□□□□ -0.58
USF2-216ENST00000607959 SPINK7P58062 85 aa11.44□□□□□ -0.58
USF2-216ENST00000607959 SPANXA2-OT1Q8N9U9 137 aa11.41□□□□□ -0.58
USF2-216ENST00000607959 SERP1Q9Y6X1 66 aa11.4□□□□□ -0.58
USF2-216ENST00000607959 C4orf26Q17RF5 130 aa11.38□□□□□ -0.59
USF2-216ENST00000607959 HRES1P13985 223 aa11.37□□□□□ -0.59
USF2-216ENST00000607959 SEC61BP60468 96 aaKnown RBP11.33□□□□□ -0.6
USF2-216ENST00000607959 KRTAP4-1Q9BYQ7 146 aa11.31□□□□□ -0.6
USF2-216ENST00000607959 SMIM26A0A096LP01 95 aa11.22□□□□□ -0.61
USF2-216ENST00000607959 UBR4Q5T4S7 5183 aa11.2□□□□□ -0.62
USF2-216ENST00000607959 KRTAP3-1Q9BYR8 98 aa11.19□□□□□ -0.62
USF2-216ENST00000607959 MUC2Q02817 5179 aa11.17□□□□□ -0.62
USF2-216ENST00000607959 MPLKIPQ8TAP9 179 aa11.17□□□□□ -0.62
USF2-216ENST00000607959 DMAC1Q96GE9 116 aa11.16□□□□□ -0.62
USF2-216ENST00000607959 COX6B2Q6YFQ2 88 aa11.12□□□□□ -0.63
USF2-216ENST00000607959 PRO0628Q9UI54 55 aa11.09□□□□□ -0.63
USF2-216ENST00000607959 RNF213Q63HN8 5207 aa11.09□□□□□ -0.63
USF2-216ENST00000607959 COA5Q86WW8 74 aa11.07□□□□□ -0.64
USF2-216ENST00000607959 A8MUN3 132 aa11.01□□□□□ -0.65
USF2-216ENST00000607959 ACYP2P14621 99 aa11.01□□□□□ -0.65
USF2-216ENST00000607959 KRTAP19-2Q3LHN2 52 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms