RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 RNF213Q63HN8 5207 aa8.95□□□□□ -0.98
SHKBP1-219ENST00000599575 A8MWP4 228 aa8.95□□□□□ -0.98
SHKBP1-219ENST00000599575 Q75L30 129 aa8.95□□□□□ -0.98
SHKBP1-219ENST00000599575 A0A1B0GV90 55 aa8.94□□□□□ -0.98
SHKBP1-219ENST00000599575 IGHV6-1A0A0B4J1U7 121 aa8.93□□□□□ -0.98
SHKBP1-219ENST00000599575 UBL5Q9BZL1 73 aa8.93□□□□□ -0.98
SHKBP1-219ENST00000599575 C20orf166-AS1Q96NR2 134 aa8.92□□□□□ -0.98
SHKBP1-219ENST00000599575 MUC17Q685J3 4493 aa8.91□□□□□ -0.98
SHKBP1-219ENST00000599575 DSCR10P59022 87 aa8.91□□□□□ -0.98
SHKBP1-219ENST00000599575 Q6ZVQ6 151 aa8.91□□□□□ -0.98
SHKBP1-219ENST00000599575 BPY2O14599 106 aa8.9□□□□□ -0.98
SHKBP1-219ENST00000599575 A8MUU9 505 aa8.89□□□□□ -0.99
SHKBP1-219ENST00000599575 ACYP1P07311 99 aa8.89□□□□□ -0.99
SHKBP1-219ENST00000599575 LINC00846Q9NV44 126 aa8.89□□□□□ -0.99
SHKBP1-219ENST00000599575 PRR15Q8IV56 129 aa8.88□□□□□ -0.99
SHKBP1-219ENST00000599575 MUC2Q02817 5179 aa8.87□□□□□ -0.99
SHKBP1-219ENST00000599575 IGKV3D-7A0A0C4DH55 119 aa8.87□□□□□ -0.99
SHKBP1-219ENST00000599575 ATP11AUNQ6ZP68 121 aa8.87□□□□□ -0.99
SHKBP1-219ENST00000599575 FAM240AA0A1B0GVK7 77 aa8.86□□□□□ -0.99
SHKBP1-219ENST00000599575 KRTAP16-1A8MUX0 517 aa8.86□□□□□ -0.99
SHKBP1-219ENST00000599575 PCOTHQ58A44 107 aa8.86□□□□□ -0.99
SHKBP1-219ENST00000599575 NOTCH2NLQ7Z3S9 236 aa8.84□□□□□ -0.99
SHKBP1-219ENST00000599575 A0A0U1RQV1 116 aa8.83□□□□□ -1
SHKBP1-219ENST00000599575 C8orf17Q9NRJ1 99 aa8.83□□□□□ -1
SHKBP1-219ENST00000599575 K7EQZ3 153 aa8.79□□□□□ -1
SHKBP1-219ENST00000599575 CXCL6P80162 114 aa8.79□□□□□ -1
SHKBP1-219ENST00000599575 Q8N9P0 234 aaPredicted RBP8.78□□□□□ -1
SHKBP1-219ENST00000599575 TMEM254Q8TBM7 123 aa8.76□□□□□ -1.01
SHKBP1-219ENST00000599575 MMP24-AS1A0A0U1RRL7 71 aa8.75□□□□□ -1.01
SHKBP1-219ENST00000599575 J3QR89 54 aa8.75□□□□□ -1.01
SHKBP1-219ENST00000599575 hDV103S1A0JD37 113 aa8.74□□□□□ -1.01
SHKBP1-219ENST00000599575 MRPL34Q9BQ48 92 aaKnown RBP8.73□□□□□ -1.01
SHKBP1-219ENST00000599575 KRTAP4-1Q9BYQ7 146 aa8.73□□□□□ -1.01
SHKBP1-219ENST00000599575 ATP5EP2Q5VTU8 51 aa8.72□□□□□ -1.01
SHKBP1-219ENST00000599575 Q8N9L7 120 aa8.69□□□□□ -1.02
SHKBP1-219ENST00000599575 CASC2Q6XLA1 102 aa8.68□□□□□ -1.02
SHKBP1-219ENST00000599575 ZCCHC13Q8WW36 166 aaKnown RBP8.67□□□□□ -1.02
SHKBP1-219ENST00000599575 HCG22E2RYF7 251 aa8.65□□□□□ -1.02
SHKBP1-219ENST00000599575 LINC00643Q86TS7 51 aa8.65□□□□□ -1.02
SHKBP1-219ENST00000599575 WFDC13Q8IUB5 93 aa8.62□□□□□ -1.03
SHKBP1-219ENST00000599575 NDUFS5O43920 106 aa8.6□□□□□ -1.03
SHKBP1-219ENST00000599575 FAT4Q6V0I7 4981 aa8.59□□□□□ -1.03
SHKBP1-219ENST00000599575 K7ERU9 68 aa8.56□□□□□ -1.04
SHKBP1-219ENST00000599575 TP53AIP1Q9HCN2 124 aa8.55□□□□□ -1.04
SHKBP1-219ENST00000599575 SPINK7P58062 85 aa8.52□□□□□ -1.05
SHKBP1-219ENST00000599575 HIST1H4AP62805 103 aaKnown RBP8.52□□□□□ -1.05
SHKBP1-219ENST00000599575 KRTAP19-2Q3LHN2 52 aa8.52□□□□□ -1.05
SHKBP1-219ENST00000599575 COX6B2Q6YFQ2 88 aa8.49□□□□□ -1.05
SHKBP1-219ENST00000599575 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
SHKBP1-219ENST00000599575 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
SHKBP1-219ENST00000599575 RBM12B-AS1Q9P1G2 102 aa8.47□□□□□ -1.05
SHKBP1-219ENST00000599575 MPLKIPQ8TAP9 179 aa8.46□□□□□ -1.06
SHKBP1-219ENST00000599575 HRES1P13985 223 aa8.45□□□□□ -1.06
SHKBP1-219ENST00000599575 Q5W150 140 aa8.45□□□□□ -1.06
SHKBP1-219ENST00000599575 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
SHKBP1-219ENST00000599575 IMUPQ9GZP8 106 aa8.41□□□□□ -1.06
SHKBP1-219ENST00000599575 A0A087WVE0 104 aa8.39□□□□□ -1.07
SHKBP1-219ENST00000599575 IGKV2D-30A0A075B6S6 120 aa8.37□□□□□ -1.07
SHKBP1-219ENST00000599575 FAM236DA0A1B0GTK5 79 aa8.37□□□□□ -1.07
SHKBP1-219ENST00000599575 UQCRQO14949 82 aa8.37□□□□□ -1.07
SHKBP1-219ENST00000599575 IGKV2-30P06310 120 aa8.37□□□□□ -1.07
SHKBP1-219ENST00000599575 FAM236CP0DP71 79 aa8.37□□□□□ -1.07
SHKBP1-219ENST00000599575 MT1HP80294 61 aa8.36□□□□□ -1.07
SHKBP1-219ENST00000599575 TRAV22A0A0B4J277 110 aa8.35□□□□□ -1.07
SHKBP1-219ENST00000599575 ATOX1O00244 68 aa8.32□□□□□ -1.08
SHKBP1-219ENST00000599575 FLGP20930 4061 aaPredicted RBP8.3□□□□□ -1.08
SHKBP1-219ENST00000599575 LOC101927531A0A1B0GV80 90 aa8.29□□□□□ -1.08
SHKBP1-219ENST00000599575 M0R2T5 61 aa8.27□□□□□ -1.09
SHKBP1-219ENST00000599575 MT-ATP8P03928 68 aa8.27□□□□□ -1.09
SHKBP1-219ENST00000599575 SCGB1A1P11684 91 aa8.27□□□□□ -1.09
SHKBP1-219ENST00000599575 OCR1Q9BZK8 76 aa8.27□□□□□ -1.09
SHKBP1-219ENST00000599575 CYP4F30PQ9H0H9 118 aa8.24□□□□□ -1.09
SHKBP1-219ENST00000599575 H0Y9P7 68 aa8.23□□□□□ -1.09
SHKBP1-219ENST00000599575 C5orf47Q569G3 176 aa8.23□□□□□ -1.09
SHKBP1-219ENST00000599575 MP68P56378 58 aa8.22□□□□□ -1.09
SHKBP1-219ENST00000599575 SMIM20Q8N5G0 67 aa8.21□□□□□ -1.1
SHKBP1-219ENST00000599575 H1FX-AS1Q4G0G2 97 aa8.2□□□□□ -1.1
SHKBP1-219ENST00000599575 H3BPC8 53 aa8.19□□□□□ -1.1
SHKBP1-219ENST00000599575 C4orf26Q17RF5 130 aa8.19□□□□□ -1.1
SHKBP1-219ENST00000599575 C1orf64Q8NEQ6 169 aa8.17□□□□□ -1.1
SHKBP1-219ENST00000599575 FAM236AA0A1B0GUQ0 79 aa8.15□□□□□ -1.1
SHKBP1-219ENST00000599575 FAM236BA0A1B0GV22 79 aa8.15□□□□□ -1.1
SHKBP1-219ENST00000599575 KRTAP10-6P60371 365 aaPredicted RBP8.15□□□□□ -1.1
SHKBP1-219ENST00000599575 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
SHKBP1-219ENST00000599575 LINC00208Q96KT6 92 aa8.14□□□□□ -1.11
SHKBP1-219ENST00000599575 TRAV7A0A075B6U4 112 aa8.1□□□□□ -1.11
SHKBP1-219ENST00000599575 KRTAP3-1Q9BYR8 98 aa8.06□□□□□ -1.12
SHKBP1-219ENST00000599575 A8MUN3 132 aa8.03□□□□□ -1.12
SHKBP1-219ENST00000599575 KLKP1Q107X0 134 aa7.99□□□□□ -1.13
SHKBP1-219ENST00000599575 KRTAP9-8Q9BYQ0 159 aa7.98□□□□□ -1.13
SHKBP1-219ENST00000599575 S4R3F8 94 aa7.98□□□□□ -1.13
SHKBP1-219ENST00000599575 SERP2Q8N6R1 65 aa7.97□□□□□ -1.13
SHKBP1-219ENST00000599575 LCE2DQ5TA82 110 aaPredicted RBP7.95□□□□□ -1.14
SHKBP1-219ENST00000599575 CSAG1Q6PB30 78 aa7.92□□□□□ -1.14
SHKBP1-219ENST00000599575 LCA10Q71F78 164 aa7.9□□□□□ -1.14
SHKBP1-219ENST00000599575 MT2AP02795 61 aa7.89□□□□□ -1.15
SHKBP1-219ENST00000599575 KRTAP9-2Q9BYQ4 174 aa7.89□□□□□ -1.15
SHKBP1-219ENST00000599575 DMAC1Q96GE9 116 aa7.86□□□□□ -1.15
SHKBP1-219ENST00000599575 C20orf197Q8N268 126 aa7.84□□□□□ -1.15
SHKBP1-219ENST00000599575 NDUFC1O43677 76 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms