RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 MPLKIPQ8TAP9 179 aa6.14□□□□□ -1.43
LIG1-217ENST00000599165 HRES1P13985 223 aa6.13□□□□□ -1.43
LIG1-217ENST00000599165 LOC110117498A0A087WWA1 95 aa6.12□□□□□ -1.43
LIG1-217ENST00000599165 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
LIG1-217ENST00000599165 LOC105371267A0A1B0GV96 52 aa6.11□□□□□ -1.43
LIG1-217ENST00000599165 C8orf87E5RJ46 101 aa6.11□□□□□ -1.43
LIG1-217ENST00000599165 JMJD7-PLA2G4BH0Y9G9 81 aa6.09□□□□□ -1.43
LIG1-217ENST00000599165 C14orf132Q9NPU4 83 aa6.09□□□□□ -1.43
LIG1-217ENST00000599165 J3KT08 172 aa6.08□□□□□ -1.44
LIG1-217ENST00000599165 TRBV20-1A0A075B6N2 111 aa6.07□□□□□ -1.44
LIG1-217ENST00000599165 IGKV3D-7A0A0C4DH55 119 aa6.06□□□□□ -1.44
LIG1-217ENST00000599165 TSTD3H0UI37 97 aa6.06□□□□□ -1.44
LIG1-217ENST00000599165 TAX1BP3O14907 124 aa6.06□□□□□ -1.44
LIG1-217ENST00000599165 BATFQ16520 125 aa6.06□□□□□ -1.44
LIG1-217ENST00000599165 C21orf62-AS1Q17RA5 79 aa6.06□□□□□ -1.44
LIG1-217ENST00000599165 Q8N9P0 234 aaPredicted RBP6.06□□□□□ -1.44
LIG1-217ENST00000599165 A0A1B0GW54 56 aa6.05□□□□□ -1.44
LIG1-217ENST00000599165 A8MWP4 228 aa6.05□□□□□ -1.44
LIG1-217ENST00000599165 ZCCHC13Q8WW36 166 aaKnown RBP6.05□□□□□ -1.44
LIG1-217ENST00000599165 C8orf17Q9NRJ1 99 aa6.04□□□□□ -1.44
LIG1-217ENST00000599165 C9orf118A6NHY6 69 aa6.03□□□□□ -1.44
LIG1-217ENST00000599165 PDE6GP18545 87 aa6.03□□□□□ -1.44
LIG1-217ENST00000599165 LYRM7Q5U5X0 104 aa6.03□□□□□ -1.44
LIG1-217ENST00000599165 USH2AO75445 5202 aa6.03□□□□□ -1.44
LIG1-217ENST00000599165 MTURNQ8N3F0 131 aa6.02□□□□□ -1.45
LIG1-217ENST00000599165 A0A1W2PPM0 123 aa6.01□□□□□ -1.45
LIG1-217ENST00000599165 MT2AP02795 61 aa6.01□□□□□ -1.45
LIG1-217ENST00000599165 SSPOA2VEC9 5147 aa6.01□□□□□ -1.45
LIG1-217ENST00000599165 NDUFB1O75438 58 aa6□□□□□ -1.45
LIG1-217ENST00000599165 SPINK7P58062 85 aa6□□□□□ -1.45
LIG1-217ENST00000599165 FAM236DA0A1B0GTK5 79 aa5.99□□□□□ -1.45
LIG1-217ENST00000599165 H3BT86 120 aa5.99□□□□□ -1.45
LIG1-217ENST00000599165 FAM236CP0DP71 79 aa5.99□□□□□ -1.45
LIG1-217ENST00000599165 PRR15Q8IV56 129 aa5.99□□□□□ -1.45
LIG1-217ENST00000599165 RBM12B-AS1Q9P1G2 102 aa5.99□□□□□ -1.45
LIG1-217ENST00000599165 MMP24-AS1A0A0U1RRL7 71 aa5.98□□□□□ -1.45
LIG1-217ENST00000599165 MT1FP04733 61 aa5.98□□□□□ -1.45
LIG1-217ENST00000599165 Q6ZVQ6 151 aa5.97□□□□□ -1.45
LIG1-217ENST00000599165 SMCPP49901 116 aaPredicted RBP5.96□□□□□ -1.46
LIG1-217ENST00000599165 NREPQ16612 68 aa5.96□□□□□ -1.46
LIG1-217ENST00000599165 K7EQZ3 153 aa5.95□□□□□ -1.46
LIG1-217ENST00000599165 TMEM254Q8TBM7 123 aa5.93□□□□□ -1.46
LIG1-217ENST00000599165 MRPL34Q9BQ48 92 aaKnown RBP5.92□□□□□ -1.46
LIG1-217ENST00000599165 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
LIG1-217ENST00000599165 LCE2BO14633 110 aa5.91□□□□□ -1.46
LIG1-217ENST00000599165 WFDC13Q8IUB5 93 aa5.91□□□□□ -1.46
LIG1-217ENST00000599165 SPCS1Q9Y6A9 102 aa5.91□□□□□ -1.46
LIG1-217ENST00000599165 PRO0461Q9UI25 63 aa5.9□□□□□ -1.46
LIG1-217ENST00000599165 hDV103S1A0JD37 113 aa5.89□□□□□ -1.47
LIG1-217ENST00000599165 Q5W150 140 aa5.87□□□□□ -1.47
LIG1-217ENST00000599165 Q8N9L7 120 aa5.87□□□□□ -1.47
LIG1-217ENST00000599165 BPY2O14599 106 aa5.86□□□□□ -1.47
LIG1-217ENST00000599165 KRTAP10-10P60014 251 aa5.85□□□□□ -1.47
LIG1-217ENST00000599165 K7EP34 96 aa5.83□□□□□ -1.48
LIG1-217ENST00000599165 COL5A1-AS1Q5SY13 56 aa5.83□□□□□ -1.48
LIG1-217ENST00000599165 LINC00846Q9NV44 126 aa5.83□□□□□ -1.48
LIG1-217ENST00000599165 NDUFS5O43920 106 aa5.81□□□□□ -1.48
LIG1-217ENST00000599165 FCGBPQ9Y6R7 5405 aaPredicted RBP5.81□□□□□ -1.48
LIG1-217ENST00000599165 CASC2Q6XLA1 102 aa5.79□□□□□ -1.48
LIG1-217ENST00000599165 HCG22E2RYF7 251 aa5.78□□□□□ -1.48
LIG1-217ENST00000599165 IGKV2D-30A0A075B6S6 120 aa5.77□□□□□ -1.49
LIG1-217ENST00000599165 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.77□□□□□ -1.49
LIG1-217ENST00000599165 IGKV2-30P06310 120 aa5.77□□□□□ -1.49
LIG1-217ENST00000599165 H1FX-AS1Q4G0G2 97 aa5.77□□□□□ -1.49
LIG1-217ENST00000599165 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
LIG1-217ENST00000599165 C7orf65Q6ZTY9 151 aa5.76□□□□□ -1.49
LIG1-217ENST00000599165 UBL5Q9BZL1 73 aa5.73□□□□□ -1.49
LIG1-217ENST00000599165 CXCL6P80162 114 aa5.71□□□□□ -1.5
LIG1-217ENST00000599165 C4orf26Q17RF5 130 aa5.71□□□□□ -1.5
LIG1-217ENST00000599165 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
LIG1-217ENST00000599165 PCP4L1A6NKN8 68 aa5.69□□□□□ -1.5
LIG1-217ENST00000599165 ETDBQ3ZM63 59 aa5.69□□□□□ -1.5
LIG1-217ENST00000599165 F8W1H4 67 aa5.68□□□□□ -1.5
LIG1-217ENST00000599165 GTF2H5Q6ZYL4 71 aa5.68□□□□□ -1.5
LIG1-217ENST00000599165 KRTAP19-6Q3LI70 58 aa5.67□□□□□ -1.5
LIG1-217ENST00000599165 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
LIG1-217ENST00000599165 MACF1Q9UPN3 7388 aaKnown RBP5.62□□□□□ -1.51
LIG1-217ENST00000599165 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
LIG1-217ENST00000599165 TP53AIP1Q9HCN2 124 aa5.59□□□□□ -1.51
LIG1-217ENST00000599165 C5orf47Q569G3 176 aa5.58□□□□□ -1.52
LIG1-217ENST00000599165 C1orf64Q8NEQ6 169 aa5.58□□□□□ -1.52
LIG1-217ENST00000599165 LCA10Q71F78 164 aa5.56□□□□□ -1.52
LIG1-217ENST00000599165 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
LIG1-217ENST00000599165 CYP4F30PQ9H0H9 118 aa5.54□□□□□ -1.52
LIG1-217ENST00000599165 S4R3F8 94 aa5.54□□□□□ -1.52
LIG1-217ENST00000599165 FAM240AA0A1B0GVK7 77 aa5.53□□□□□ -1.52
LIG1-217ENST00000599165 A0A087WVE0 104 aa5.52□□□□□ -1.53
LIG1-217ENST00000599165 ACYP1P07311 99 aa5.51□□□□□ -1.53
LIG1-217ENST00000599165 MT1BP07438 61 aa5.5□□□□□ -1.53
LIG1-217ENST00000599165 TRAV22A0A0B4J277 110 aa5.49□□□□□ -1.53
LIG1-217ENST00000599165 CSAG1Q6PB30 78 aa5.49□□□□□ -1.53
LIG1-217ENST00000599165 ATP5EP2Q5VTU8 51 aa5.48□□□□□ -1.53
LIG1-217ENST00000599165 SPRR2GQ9BYE4 73 aa5.48□□□□□ -1.53
LIG1-217ENST00000599165 LOC101927531A0A1B0GV80 90 aa5.46□□□□□ -1.54
LIG1-217ENST00000599165 KRTAP19-8Q3LI54 63 aa5.46□□□□□ -1.54
LIG1-217ENST00000599165 FAM236AA0A1B0GUQ0 79 aa5.45□□□□□ -1.54
LIG1-217ENST00000599165 FAM236BA0A1B0GV22 79 aa5.45□□□□□ -1.54
LIG1-217ENST00000599165 HIST1H4AP62805 103 aaKnown RBP5.44□□□□□ -1.54
LIG1-217ENST00000599165 A0A1B0GV90 55 aa5.42□□□□□ -1.54
LIG1-217ENST00000599165 UQCRQO14949 82 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms