RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 TNXBP22105 4242 aa1.27□□□□□ -2.21
PAF1-208ENST00000598594 H3BNG1 76 aa1.27□□□□□ -2.21
PAF1-208ENST00000598594 SPTBN4Q9H254 2564 aa1.27□□□□□ -2.21
PAF1-208ENST00000598594 HIVEP3Q5T1R4 2406 aa1.27□□□□□ -2.21
PAF1-208ENST00000598594 DMBT1Q9UGM3 2413 aaPredicted RBP1.27□□□□□ -2.21
PAF1-208ENST00000598594 PRKDCP78527 4128 aaKnown RBP1.26□□□□□ -2.21
PAF1-208ENST00000598594 SETD2Q9BYW2 2564 aaPredicted RBP1.26□□□□□ -2.21
PAF1-208ENST00000598594 APCP25054 2843 aa1.25□□□□□ -2.21
PAF1-208ENST00000598594 FAT2Q9NYQ8 4349 aa1.24□□□□□ -2.21
PAF1-208ENST00000598594 FBN3Q75N90 2809 aa1.24□□□□□ -2.21
PAF1-208ENST00000598594 RPL39P5Q59GN2 51 aa1.23□□□□□ -2.21
PAF1-208ENST00000598594 APC2O95996 2303 aa1.23□□□□□ -2.21
PAF1-208ENST00000598594 MAP1BP46821 2468 aaKnown RBP1.22□□□□□ -2.21
PAF1-208ENST00000598594 GCN1Q92616 2671 aaKnown RBP1.21□□□□□ -2.22
PAF1-208ENST00000598594 ACANP16112 2415 aa1.21□□□□□ -2.22
PAF1-208ENST00000598594 VPS13BQ7Z7G8 4022 aa1.2□□□□□ -2.22
PAF1-208ENST00000598594 PKD1L1Q8TDX9 2849 aa1.2□□□□□ -2.22
PAF1-208ENST00000598594 ZNF469Q96JG9 3925 aaPredicted RBP1.2□□□□□ -2.22
PAF1-208ENST00000598594 VPS13DQ5THJ4 4388 aa1.19□□□□□ -2.22
PAF1-208ENST00000598594 DEFB110Q30KQ9 67 aa1.19□□□□□ -2.22
PAF1-208ENST00000598594 NOTCH1P46531 2555 aa1.19□□□□□ -2.22
PAF1-208ENST00000598594 DNAH11Q96DT5 4516 aa1.18□□□□□ -2.22
PAF1-208ENST00000598594 SPART-AS1P0CW21 52 aa1.18□□□□□ -2.22
PAF1-208ENST00000598594 SACSQ9NZJ4 4579 aa1.17□□□□□ -2.22
PAF1-208ENST00000598594 KMT2AQ03164 3969 aa1.17□□□□□ -2.22
PAF1-208ENST00000598594 UNC79Q9P2D8 2635 aa1.17□□□□□ -2.22
PAF1-208ENST00000598594 DEFB108AA8MXU0 73 aa1.17□□□□□ -2.22
PAF1-208ENST00000598594 NF1P21359 2839 aa1.16□□□□□ -2.22
PAF1-208ENST00000598594 ZFYVE26Q68DK2 2539 aa1.16□□□□□ -2.22
PAF1-208ENST00000598594 PTPN13Q12923 2485 aa1.15□□□□□ -2.22
PAF1-208ENST00000598594 ZZEF1O43149 2961 aa1.15□□□□□ -2.22
PAF1-208ENST00000598594 USP24Q9UPU5 2620 aa1.15□□□□□ -2.23
PAF1-208ENST00000598594 MGAQ8IWI9 3026 aa1.15□□□□□ -2.23
PAF1-208ENST00000598594 FLNCQ14315 2725 aa1.14□□□□□ -2.23
PAF1-208ENST00000598594 MTORP42345 2549 aa1.13□□□□□ -2.23
PAF1-208ENST00000598594 RIF1Q5UIP0 2472 aaKnown RBP1.13□□□□□ -2.23
PAF1-208ENST00000598594 CRYBG3Q68DQ2 2970 aa1.13□□□□□ -2.23
PAF1-208ENST00000598594 SPENQ96T58 3664 aaKnown RBP1.12□□□□□ -2.23
PAF1-208ENST00000598594 CRCT1Q9UGL9 99 aa1.12□□□□□ -2.23
PAF1-208ENST00000598594 STAB1Q9NY15 2570 aa1.11□□□□□ -2.23
PAF1-208ENST00000598594 LRRK2Q5S007 2527 aa1.11□□□□□ -2.23
PAF1-208ENST00000598594 SETXQ7Z333 2677 aaKnown RBP1.11□□□□□ -2.23
PAF1-208ENST00000598594 FRYQ5TBA9 3013 aa1.1□□□□□ -2.23
PAF1-208ENST00000598594 DCHS2Q6V1P9 2916 aa1.1□□□□□ -2.23
PAF1-208ENST00000598594 USP9YO00507 2555 aaPredicted RBP1.09□□□□□ -2.23
PAF1-208ENST00000598594 MYCBP2O75592 4640 aa1.09□□□□□ -2.24
PAF1-208ENST00000598594 HUWE1Q7Z6Z7 4374 aaKnown RBP1.08□□□□□ -2.24
PAF1-208ENST00000598594 ZFHX4Q86UP3 3567 aa1.08□□□□□ -2.24
PAF1-208ENST00000598594 FAM186AA6NE01 2351 aa1.08□□□□□ -2.24
PAF1-208ENST00000598594 DMXL1Q9Y485 3027 aa1.07□□□□□ -2.24
PAF1-208ENST00000598594 COL12A1Q99715 3063 aa1.07□□□□□ -2.24
PAF1-208ENST00000598594 EPG5Q9HCE0 2579 aa1.06□□□□□ -2.24
PAF1-208ENST00000598594 ITPR3Q14573 2671 aa1.06□□□□□ -2.24
PAF1-208ENST00000598594 TACC2O95359 2948 aa1.05□□□□□ -2.24
PAF1-208ENST00000598594 SPRR2DP22532 72 aa1.05□□□□□ -2.24
PAF1-208ENST00000598594 KRTAP4-1Q9BYQ7 146 aa1.05□□□□□ -2.24
PAF1-208ENST00000598594 NSD1Q96L73 2696 aaPredicted RBP1.05□□□□□ -2.24
PAF1-208ENST00000598594 ANKRD11Q6UB99 2663 aaPredicted RBP1.04□□□□□ -2.24
PAF1-208ENST00000598594 ACACBO00763 2458 aa1.04□□□□□ -2.24
PAF1-208ENST00000598594 NBPF19A0A087WUL8 3843 aa1.04□□□□□ -2.24
PAF1-208ENST00000598594 RHPN1-AS1Q9BWJ2 59 aa1.04□□□□□ -2.24
PAF1-208ENST00000598594 CUBNO60494 3623 aa1.04□□□□□ -2.24
PAF1-208ENST00000598594 DNAH3Q8TD57 4116 aa1.03□□□□□ -2.24
PAF1-208ENST00000598594 SPG11Q96JI7 2443 aa1.03□□□□□ -2.24
PAF1-208ENST00000598594 H3BUX3 64 aa1.03□□□□□ -2.24
PAF1-208ENST00000598594 ANKHD1Q8IWZ3 2542 aaKnown RBP1.03□□□□□ -2.25
PAF1-208ENST00000598594 NBEAL2Q6ZNJ1 2754 aa1.02□□□□□ -2.25
PAF1-208ENST00000598594 HMCN1Q96RW7 5635 aa1.02□□□□□ -2.25
PAF1-208ENST00000598594 DYNC2H1Q8NCM8 4307 aaKnown RBP1.02□□□□□ -2.25
PAF1-208ENST00000598594 CELSR3Q9NYQ7 3312 aa1.02□□□□□ -2.25
PAF1-208ENST00000598594 FLNBO75369 2602 aaKnown RBP1.02□□□□□ -2.25
PAF1-208ENST00000598594 NCOR2Q9Y618 2525 aa1.01□□□□□ -2.25
PAF1-208ENST00000598594 A0A096LNI7 61 aa1.01□□□□□ -2.25
PAF1-208ENST00000598594 APELAP0DMC3 54 aa1.01□□□□□ -2.25
PAF1-208ENST00000598594 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
PAF1-208ENST00000598594 KRTAP8-1Q8IUC2 63 aa1.01□□□□□ -2.25
PAF1-208ENST00000598594 TENM1Q9UKZ4 2725 aa1□□□□□ -2.25
PAF1-208ENST00000598594 SONP18583 2426 aaKnown RBP1□□□□□ -2.25
PAF1-208ENST00000598594 COL7A1Q02388 2944 aa1□□□□□ -2.25
PAF1-208ENST00000598594 PKHD1L1Q86WI1 4243 aa1□□□□□ -2.25
PAF1-208ENST00000598594 SPRR2BP35325 72 aa0.99□□□□□ -2.25
PAF1-208ENST00000598594 RANBP2P49792 3224 aaKnown RBP0.99□□□□□ -2.25
PAF1-208ENST00000598594 PKD1P98161 4303 aa0.98□□□□□ -2.25
PAF1-208ENST00000598594 DNAH2Q9P225 4427 aa0.98□□□□□ -2.25
PAF1-208ENST00000598594 ANK3Q12955 4377 aaKnown RBP0.98□□□□□ -2.25
PAF1-208ENST00000598594 CACNA1AO00555 2505 aa0.97□□□□□ -2.25
PAF1-208ENST00000598594 DEFB1P60022 68 aa0.97□□□□□ -2.25
PAF1-208ENST00000598594 TLN2Q9Y4G6 2542 aa0.96□□□□□ -2.26
PAF1-208ENST00000598594 HECTD4Q9Y4D8 3996 aa0.96□□□□□ -2.26
PAF1-208ENST00000598594 DNAH8Q96JB1 4490 aa0.96□□□□□ -2.26
PAF1-208ENST00000598594 HSPG2P98160 4391 aa0.96□□□□□ -2.26
PAF1-208ENST00000598594 DNAH7Q8WXX0 4024 aa0.95□□□□□ -2.26
PAF1-208ENST00000598594 DEFB136Q30KP8 78 aa0.95□□□□□ -2.26
PAF1-208ENST00000598594 FCGBPQ9Y6R7 5405 aaPredicted RBP0.95□□□□□ -2.26
PAF1-208ENST00000598594 HIVEP1P15822 2718 aa0.95□□□□□ -2.26
PAF1-208ENST00000598594 HRNRQ86YZ3 2850 aaPredicted RBP0.94□□□□□ -2.26
PAF1-208ENST00000598594 RELNP78509 3460 aa0.94□□□□□ -2.26
PAF1-208ENST00000598594 LRP1Q07954 4544 aaKnown RBP0.94□□□□□ -2.26
PAF1-208ENST00000598594 UTP20O75691 2785 aaKnown RBP0.94□□□□□ -2.26
PAF1-208ENST00000598594 SYNE1Q8NF91 8797 aaKnown RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms