RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 VAMP8Q9BV40 100 aa5.12□□□□□ -1.59
USE1-203ENST00000593597 TMEM238LA0A1B0GVL6 79 aa5.11□□□□□ -1.59
USE1-203ENST00000593597 A6NJY4 79 aa5.11□□□□□ -1.59
USE1-203ENST00000593597 SPINK7P58062 85 aa5.11□□□□□ -1.59
USE1-203ENST00000593597 C8orf87E5RJ46 101 aa5.1□□□□□ -1.59
USE1-203ENST00000593597 DNAL4O96015 105 aa5.1□□□□□ -1.59
USE1-203ENST00000593597 TMEM256-PLSCR3K7ERE1 68 aa5.09□□□□□ -1.59
USE1-203ENST00000593597 UBE2V1Q13404 147 aa5.09□□□□□ -1.59
USE1-203ENST00000593597 Q8N9P0 234 aaPredicted RBP5.08□□□□□ -1.6
USE1-203ENST00000593597 VPS25Q9BRG1 176 aa5.07□□□□□ -1.6
USE1-203ENST00000593597 H3BQ85 93 aa5.06□□□□□ -1.6
USE1-203ENST00000593597 PSMB2P49721 201 aa5.06□□□□□ -1.6
USE1-203ENST00000593597 HSD52Q0P140 79 aa5.06□□□□□ -1.6
USE1-203ENST00000593597 WFDC13Q8IUB5 93 aa5.06□□□□□ -1.6
USE1-203ENST00000593597 A8MWP4 228 aa5.05□□□□□ -1.6
USE1-203ENST00000593597 MTURNQ8N3F0 131 aa5.04□□□□□ -1.6
USE1-203ENST00000593597 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
USE1-203ENST00000593597 PYY3Q5JQD4 70 aa5.03□□□□□ -1.6
USE1-203ENST00000593597 Q6ZQT0 140 aa5.03□□□□□ -1.6
USE1-203ENST00000593597 RBM3P98179 157 aaKnown RBP5.02□□□□□ -1.61
USE1-203ENST00000593597 C8orf17Q9NRJ1 99 aa5.02□□□□□ -1.61
USE1-203ENST00000593597 NEBP20929 6669 aa5.01□□□□□ -1.61
USE1-203ENST00000593597 IGKV3D-7A0A0C4DH55 119 aa5.01□□□□□ -1.61
USE1-203ENST00000593597 J3KT08 172 aa5.01□□□□□ -1.61
USE1-203ENST00000593597 COX6CP09669 75 aa5.01□□□□□ -1.61
USE1-203ENST00000593597 SMIM6P0DI80 62 aa5.01□□□□□ -1.61
USE1-203ENST00000593597 LINC00846Q9NV44 126 aa5□□□□□ -1.61
USE1-203ENST00000593597 DSCR8Q96T75 97 aa4.99□□□□□ -1.61
USE1-203ENST00000593597 PCP4L1A6NKN8 68 aa4.97□□□□□ -1.61
USE1-203ENST00000593597 C9JAW5 83 aa4.97□□□□□ -1.61
USE1-203ENST00000593597 BAALC-AS2P0C853 105 aa4.97□□□□□ -1.61
USE1-203ENST00000593597 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.61
USE1-203ENST00000593597 MMP24-AS1A0A0U1RRL7 71 aa4.96□□□□□ -1.62
USE1-203ENST00000593597 Q6ZVQ6 151 aa4.96□□□□□ -1.62
USE1-203ENST00000593597 NDUFB1O75438 58 aa4.95□□□□□ -1.62
USE1-203ENST00000593597 SCGB1C2P0DMR2 95 aa4.94□□□□□ -1.62
USE1-203ENST00000593597 H1FX-AS1Q4G0G2 97 aa4.94□□□□□ -1.62
USE1-203ENST00000593597 LOC110117498A0A087WWA1 95 aa4.93□□□□□ -1.62
USE1-203ENST00000593597 C21orf62-AS1Q17RA5 79 aa4.93□□□□□ -1.62
USE1-203ENST00000593597 PRR15Q8IV56 129 aa4.93□□□□□ -1.62
USE1-203ENST00000593597 NAA38Q9BRA0 125 aaKnown RBP4.93□□□□□ -1.62
USE1-203ENST00000593597 UQCR10Q9UDW1 63 aa4.93□□□□□ -1.62
USE1-203ENST00000593597 LYRM7Q5U5X0 104 aa4.92□□□□□ -1.62
USE1-203ENST00000593597 TSTD3H0UI37 97 aa4.9□□□□□ -1.63
USE1-203ENST00000593597 TMEM254Q8TBM7 123 aa4.9□□□□□ -1.63
USE1-203ENST00000593597 MRPL34Q9BQ48 92 aaKnown RBP4.9□□□□□ -1.63
USE1-203ENST00000593597 C14orf132Q9NPU4 83 aa4.9□□□□□ -1.63
USE1-203ENST00000593597 MT1BP07438 61 aa4.89□□□□□ -1.63
USE1-203ENST00000593597 Q5W150 140 aa4.89□□□□□ -1.63
USE1-203ENST00000593597 A0A1B0GW54 56 aa4.88□□□□□ -1.63
USE1-203ENST00000593597 JMJD7-PLA2G4BH0Y9G9 81 aa4.88□□□□□ -1.63
USE1-203ENST00000593597 K7EQZ3 153 aa4.88□□□□□ -1.63
USE1-203ENST00000593597 ATXN8Q156A1 80 aa4.86□□□□□ -1.63
USE1-203ENST00000593597 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
USE1-203ENST00000593597 hDV103S1A0JD37 113 aa4.85□□□□□ -1.63
USE1-203ENST00000593597 IGKV2-30P06310 120 aa4.85□□□□□ -1.63
USE1-203ENST00000593597 NREPQ16612 68 aa4.84□□□□□ -1.63
USE1-203ENST00000593597 PDE6GP18545 87 aa4.83□□□□□ -1.64
USE1-203ENST00000593597 NDUFS5O43920 106 aa4.82□□□□□ -1.64
USE1-203ENST00000593597 C7orf65Q6ZTY9 151 aa4.82□□□□□ -1.64
USE1-203ENST00000593597 C4orf26Q17RF5 130 aa4.81□□□□□ -1.64
USE1-203ENST00000593597 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
USE1-203ENST00000593597 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
USE1-203ENST00000593597 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
USE1-203ENST00000593597 KMT2DO14686 5537 aa4.8□□□□□ -1.64
USE1-203ENST00000593597 A6NN06 94 aa4.8□□□□□ -1.64
USE1-203ENST00000593597 C5orf47Q569G3 176 aa4.79□□□□□ -1.64
USE1-203ENST00000593597 Q8N9L7 120 aa4.79□□□□□ -1.64
USE1-203ENST00000593597 SPRR2GQ9BYE4 73 aa4.78□□□□□ -1.64
USE1-203ENST00000593597 M0R143 59 aa4.77□□□□□ -1.65
USE1-203ENST00000593597 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
USE1-203ENST00000593597 HCG22E2RYF7 251 aa4.76□□□□□ -1.65
USE1-203ENST00000593597 Q5VV11 94 aa4.76□□□□□ -1.65
USE1-203ENST00000593597 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
USE1-203ENST00000593597 BATFQ16520 125 aa4.75□□□□□ -1.65
USE1-203ENST00000593597 BPY2O14599 106 aa4.74□□□□□ -1.65
USE1-203ENST00000593597 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
USE1-203ENST00000593597 FAM236AA0A1B0GUQ0 79 aa4.73□□□□□ -1.65
USE1-203ENST00000593597 FAM236BA0A1B0GV22 79 aa4.73□□□□□ -1.65
USE1-203ENST00000593597 CASC2Q6XLA1 102 aa4.73□□□□□ -1.65
USE1-203ENST00000593597 LCA10Q71F78 164 aa4.72□□□□□ -1.65
USE1-203ENST00000593597 H3BT86 120 aa4.71□□□□□ -1.66
USE1-203ENST00000593597 S4R3F8 94 aa4.71□□□□□ -1.66
USE1-203ENST00000593597 COL5A1-AS1Q5SY13 56 aa4.7□□□□□ -1.66
USE1-203ENST00000593597 KRTAP3-3Q9BYR6 98 aa4.69□□□□□ -1.66
USE1-203ENST00000593597 A0A1B0GV90 55 aa4.68□□□□□ -1.66
USE1-203ENST00000593597 CXCL6P80162 114 aa4.68□□□□□ -1.66
USE1-203ENST00000593597 TAX1BP3O14907 124 aa4.67□□□□□ -1.66
USE1-203ENST00000593597 KLKP1Q107X0 134 aa4.67□□□□□ -1.66
USE1-203ENST00000593597 C1orf64Q8NEQ6 169 aa4.67□□□□□ -1.66
USE1-203ENST00000593597 CSAG1Q6PB30 78 aa4.66□□□□□ -1.66
USE1-203ENST00000593597 A0A1W2PPM0 123 aa4.65□□□□□ -1.67
USE1-203ENST00000593597 C9orf118A6NHY6 69 aa4.65□□□□□ -1.67
USE1-203ENST00000593597 SMCPP49901 116 aaPredicted RBP4.65□□□□□ -1.67
USE1-203ENST00000593597 A0A087WVE0 104 aa4.64□□□□□ -1.67
USE1-203ENST00000593597 PRO0461Q9UI25 63 aa4.57□□□□□ -1.68
USE1-203ENST00000593597 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
USE1-203ENST00000593597 GTF2H5Q6ZYL4 71 aa4.55□□□□□ -1.68
USE1-203ENST00000593597 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
USE1-203ENST00000593597 SPCS1Q9Y6A9 102 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms