RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 COX7CP15954 63 aa9.74□□□□□ -0.85
GCDH-212ENST00000590530 LIMD2Q9BT23 127 aa9.74□□□□□ -0.85
GCDH-212ENST00000590530 UQCRQO14949 82 aa9.73□□□□□ -0.85
GCDH-212ENST00000590530 LINC00304Q8N9R0 145 aa9.73□□□□□ -0.85
GCDH-212ENST00000590530 TRAV7A0A075B6U4 112 aa9.72□□□□□ -0.85
GCDH-212ENST00000590530 SPINK1P00995 79 aa9.72□□□□□ -0.85
GCDH-212ENST00000590530 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
GCDH-212ENST00000590530 CCDC179H3BU77 68 aa9.71□□□□□ -0.85
GCDH-212ENST00000590530 MT1HL1P0DM35 61 aa9.71□□□□□ -0.85
GCDH-212ENST00000590530 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.85
GCDH-212ENST00000590530 SPAG11AQ6PDA7 123 aa9.7□□□□□ -0.86
GCDH-212ENST00000590530 A0A1B0GVX0 72 aa9.7□□□□□ -0.86
GCDH-212ENST00000590530 KRTAP29-1A8MX34 341 aaPredicted RBP9.69□□□□□ -0.86
GCDH-212ENST00000590530 OCR1Q9BZK8 76 aa9.68□□□□□ -0.86
GCDH-212ENST00000590530 MMP24-AS1A0A0U1RRL7 71 aa9.68□□□□□ -0.86
GCDH-212ENST00000590530 WFDC13Q8IUB5 93 aa9.67□□□□□ -0.86
GCDH-212ENST00000590530 C1orf195Q5TG92 126 aa9.66□□□□□ -0.86
GCDH-212ENST00000590530 CASC2Q6XLA1 102 aa9.66□□□□□ -0.86
GCDH-212ENST00000590530 C8orf17Q9NRJ1 99 aa9.65□□□□□ -0.86
GCDH-212ENST00000590530 IGHV6-1A0A0B4J1U7 121 aa9.64□□□□□ -0.87
GCDH-212ENST00000590530 hDV103S1A0JD37 113 aa9.61□□□□□ -0.87
GCDH-212ENST00000590530 PCLOQ9Y6V0 5065 aa9.6□□□□□ -0.87
GCDH-212ENST00000590530 DMBT1Q9UGM3 2413 aaPredicted RBP9.6□□□□□ -0.87
GCDH-212ENST00000590530 C8orf87E5RJ46 101 aa9.59□□□□□ -0.87
GCDH-212ENST00000590530 OXTP01178 125 aa9.59□□□□□ -0.87
GCDH-212ENST00000590530 RETNLBQ9BQ08 111 aa9.57□□□□□ -0.88
GCDH-212ENST00000590530 TMEM254Q8TBM7 123 aa9.57□□□□□ -0.88
GCDH-212ENST00000590530 NOTCH2NLQ7Z3S9 236 aa9.55□□□□□ -0.88
GCDH-212ENST00000590530 C20orf197Q8N268 126 aa9.55□□□□□ -0.88
GCDH-212ENST00000590530 MRPL34Q9BQ48 92 aaKnown RBP9.53□□□□□ -0.88
GCDH-212ENST00000590530 KLKP1Q107X0 134 aa9.53□□□□□ -0.88
GCDH-212ENST00000590530 C5orf47Q569G3 176 aa9.5□□□□□ -0.89
GCDH-212ENST00000590530 LINC00313P59037 77 aa9.49□□□□□ -0.89
GCDH-212ENST00000590530 TP53AIP1Q9HCN2 124 aa9.49□□□□□ -0.89
GCDH-212ENST00000590530 CYSTM1Q9H1C7 97 aa9.49□□□□□ -0.89
GCDH-212ENST00000590530 A0A0U1RQV1 116 aa9.48□□□□□ -0.89
GCDH-212ENST00000590530 SNURFQ9Y675 71 aa9.45□□□□□ -0.9
GCDH-212ENST00000590530 J3QL48 77 aa9.45□□□□□ -0.9
GCDH-212ENST00000590530 KRTAP16-1A8MUX0 517 aa9.43□□□□□ -0.9
GCDH-212ENST00000590530 MP68P56378 58 aa9.43□□□□□ -0.9
GCDH-212ENST00000590530 NDUFS5O43920 106 aa9.42□□□□□ -0.9
GCDH-212ENST00000590530 NDUFC1O43677 76 aa9.42□□□□□ -0.9
GCDH-212ENST00000590530 TRAV22A0A0B4J277 110 aa9.41□□□□□ -0.9
GCDH-212ENST00000590530 H0Y9P7 68 aa9.41□□□□□ -0.9
GCDH-212ENST00000590530 H3BPC8 53 aa9.41□□□□□ -0.9
GCDH-212ENST00000590530 Q8N9P0 234 aaPredicted RBP9.41□□□□□ -0.9
GCDH-212ENST00000590530 ZCCHC13Q8WW36 166 aaKnown RBP9.41□□□□□ -0.9
GCDH-212ENST00000590530 H7BZZ5 65 aa9.39□□□□□ -0.91
GCDH-212ENST00000590530 TMEM258P61165 79 aa9.38□□□□□ -0.91
GCDH-212ENST00000590530 C9orf92A6NGG3 77 aa9.34□□□□□ -0.91
GCDH-212ENST00000590530 LINC00208Q96KT6 92 aa9.34□□□□□ -0.91
GCDH-212ENST00000590530 HERC1Q15751 4861 aa9.34□□□□□ -0.91
GCDH-212ENST00000590530 KRTAP13-3Q3SY46 172 aa9.32□□□□□ -0.92
GCDH-212ENST00000590530 PRR4Q16378 134 aa9.32□□□□□ -0.92
GCDH-212ENST00000590530 FP248Q71RG6 208 aaPredicted RBP9.32□□□□□ -0.92
GCDH-212ENST00000590530 IGLV7-46A0A075B6I9 117 aa9.31□□□□□ -0.92
GCDH-212ENST00000590530 C1orf64Q8NEQ6 169 aa9.31□□□□□ -0.92
GCDH-212ENST00000590530 Q5W150 140 aa9.28□□□□□ -0.92
GCDH-212ENST00000590530 LPAP08519 4548 aa9.28□□□□□ -0.92
GCDH-212ENST00000590530 FAM236DA0A1B0GTK5 79 aa9.26□□□□□ -0.93
GCDH-212ENST00000590530 FAM236CP0DP71 79 aa9.26□□□□□ -0.93
GCDH-212ENST00000590530 ATP5EP56381 51 aaPredicted RBP9.25□□□□□ -0.93
GCDH-212ENST00000590530 LOC101927531A0A1B0GV80 90 aa9.24□□□□□ -0.93
GCDH-212ENST00000590530 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
GCDH-212ENST00000590530 A8MUU9 505 aa9.22□□□□□ -0.93
GCDH-212ENST00000590530 SPANXA2-OT1Q8N9U9 137 aa9.17□□□□□ -0.94
GCDH-212ENST00000590530 HMCN2Q8NDA2 5059 aa9.15□□□□□ -0.94
GCDH-212ENST00000590530 LRP2P98164 4655 aa9.15□□□□□ -0.94
GCDH-212ENST00000590530 IGKV2-30P06310 120 aa9.15□□□□□ -0.95
GCDH-212ENST00000590530 XP32Q5T750 250 aa9.15□□□□□ -0.95
GCDH-212ENST00000590530 Q75L30 129 aa9.15□□□□□ -0.95
GCDH-212ENST00000590530 CYP4F30PQ9H0H9 118 aa9.15□□□□□ -0.95
GCDH-212ENST00000590530 TPRXLQ17RH7 258 aa9.13□□□□□ -0.95
GCDH-212ENST00000590530 PCOTHQ58A44 107 aa9.12□□□□□ -0.95
GCDH-212ENST00000590530 RPS28P62857 69 aaKnown RBP9.11□□□□□ -0.95
GCDH-212ENST00000590530 SERP1Q9Y6X1 66 aa9.08□□□□□ -0.96
GCDH-212ENST00000590530 IGKV2D-30A0A075B6S6 120 aa9.04□□□□□ -0.96
GCDH-212ENST00000590530 C7orf65Q6ZTY9 151 aa9.04□□□□□ -0.96
GCDH-212ENST00000590530 RPL37P61927 97 aaKnown RBP9.03□□□□□ -0.96
GCDH-212ENST00000590530 SVIPQ8NHG7 77 aa9.02□□□□□ -0.97
GCDH-212ENST00000590530 HRES1P13985 223 aa9□□□□□ -0.97
GCDH-212ENST00000590530 ATP11AUNQ6ZP68 121 aa8.97□□□□□ -0.97
GCDH-212ENST00000590530 SPINK7P58062 85 aa8.91□□□□□ -0.98
GCDH-212ENST00000590530 DMAC1Q96GE9 116 aa8.91□□□□□ -0.98
GCDH-212ENST00000590530 COA5Q86WW8 74 aa8.86□□□□□ -0.99
GCDH-212ENST00000590530 SMIM26A0A096LP01 95 aa8.85□□□□□ -0.99
GCDH-212ENST00000590530 MUC17Q685J3 4493 aa8.84□□□□□ -0.99
GCDH-212ENST00000590530 ACYP2P14621 99 aa8.84□□□□□ -0.99
GCDH-212ENST00000590530 UBR4Q5T4S7 5183 aa8.83□□□□□ -1
GCDH-212ENST00000590530 KRTAP4-1Q9BYQ7 146 aa8.81□□□□□ -1
GCDH-212ENST00000590530 A8MUN3 132 aa8.81□□□□□ -1
GCDH-212ENST00000590530 C4orf26Q17RF5 130 aa8.79□□□□□ -1
GCDH-212ENST00000590530 MUC2Q02817 5179 aa8.79□□□□□ -1
GCDH-212ENST00000590530 SEC61BP60468 96 aaKnown RBP8.79□□□□□ -1
GCDH-212ENST00000590530 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
GCDH-212ENST00000590530 KRTAP3-1Q9BYR8 98 aa8.7□□□□□ -1.02
GCDH-212ENST00000590530 CHKB-CPT1BH3BT56 60 aa8.69□□□□□ -1.02
GCDH-212ENST00000590530 RNF213Q63HN8 5207 aa8.68□□□□□ -1.02
GCDH-212ENST00000590530 Q1T7F1 81 aa8.67□□□□□ -1.02
GCDH-212ENST00000590530 MPLKIPQ8TAP9 179 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 1002 ms