RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 C9JAW5 83 aa6.88□□□□□ -1.31
SREBF1-223ENST00000584760 IGHV6-1A0A0B4J1U7 121 aa6.85□□□□□ -1.31
SREBF1-223ENST00000584760 BATFQ16520 125 aa6.85□□□□□ -1.31
SREBF1-223ENST00000584760 C21orf62-AS1Q17RA5 79 aa6.85□□□□□ -1.31
SREBF1-223ENST00000584760 LYRM7Q5U5X0 104 aa6.85□□□□□ -1.31
SREBF1-223ENST00000584760 Q6ZQT0 140 aa6.85□□□□□ -1.31
SREBF1-223ENST00000584760 LOC110117498A0A087WWA1 95 aa6.84□□□□□ -1.31
SREBF1-223ENST00000584760 A0A1B0GVX0 72 aa6.84□□□□□ -1.31
SREBF1-223ENST00000584760 JMJD7-PLA2G4BH0Y9G9 81 aa6.84□□□□□ -1.31
SREBF1-223ENST00000584760 TRBV20-1A0A075B6N2 111 aa6.83□□□□□ -1.32
SREBF1-223ENST00000584760 C8orf87E5RJ46 101 aa6.82□□□□□ -1.32
SREBF1-223ENST00000584760 J3KT08 172 aa6.81□□□□□ -1.32
SREBF1-223ENST00000584760 A0A1B0GW54 56 aa6.8□□□□□ -1.32
SREBF1-223ENST00000584760 C14orf132Q9NPU4 83 aa6.8□□□□□ -1.32
SREBF1-223ENST00000584760 C9orf118A6NHY6 69 aa6.79□□□□□ -1.32
SREBF1-223ENST00000584760 TAX1BP3O14907 124 aa6.79□□□□□ -1.32
SREBF1-223ENST00000584760 PDE6GP18545 87 aa6.79□□□□□ -1.32
SREBF1-223ENST00000584760 A0A1W2PPM0 123 aa6.76□□□□□ -1.33
SREBF1-223ENST00000584760 H3BT86 120 aa6.75□□□□□ -1.33
SREBF1-223ENST00000584760 A8MWP4 228 aa6.74□□□□□ -1.33
SREBF1-223ENST00000584760 MTURNQ8N3F0 131 aa6.74□□□□□ -1.33
SREBF1-223ENST00000584760 NDUFB1O75438 58 aa6.73□□□□□ -1.33
SREBF1-223ENST00000584760 IGKV3D-7A0A0C4DH55 119 aa6.72□□□□□ -1.33
SREBF1-223ENST00000584760 HRES1P13985 223 aa6.72□□□□□ -1.33
SREBF1-223ENST00000584760 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
SREBF1-223ENST00000584760 Q8N9P0 234 aaPredicted RBP6.71□□□□□ -1.34
SREBF1-223ENST00000584760 C8orf17Q9NRJ1 99 aa6.71□□□□□ -1.34
SREBF1-223ENST00000584760 ZCCHC13Q8WW36 166 aaKnown RBP6.7□□□□□ -1.34
SREBF1-223ENST00000584760 SSPOA2VEC9 5147 aa6.7□□□□□ -1.34
SREBF1-223ENST00000584760 NREPQ16612 68 aa6.68□□□□□ -1.34
SREBF1-223ENST00000584760 PRR15Q8IV56 129 aa6.68□□□□□ -1.34
SREBF1-223ENST00000584760 USH2AO75445 5202 aa6.67□□□□□ -1.34
SREBF1-223ENST00000584760 SPCS1Q9Y6A9 102 aa6.67□□□□□ -1.34
SREBF1-223ENST00000584760 FAM236DA0A1B0GTK5 79 aa6.66□□□□□ -1.34
SREBF1-223ENST00000584760 FAM236CP0DP71 79 aa6.66□□□□□ -1.34
SREBF1-223ENST00000584760 KRTAP9-8Q9BYQ0 159 aa6.66□□□□□ -1.34
SREBF1-223ENST00000584760 RBM12B-AS1Q9P1G2 102 aa6.66□□□□□ -1.34
SREBF1-223ENST00000584760 Q6ZVQ6 151 aa6.65□□□□□ -1.34
SREBF1-223ENST00000584760 MMP24-AS1A0A0U1RRL7 71 aa6.64□□□□□ -1.35
SREBF1-223ENST00000584760 SMCPP49901 116 aaPredicted RBP6.63□□□□□ -1.35
SREBF1-223ENST00000584760 SPINK7P58062 85 aa6.63□□□□□ -1.35
SREBF1-223ENST00000584760 K7EQZ3 153 aa6.62□□□□□ -1.35
SREBF1-223ENST00000584760 COL5A1-AS1Q5SY13 56 aa6.62□□□□□ -1.35
SREBF1-223ENST00000584760 TMEM254Q8TBM7 123 aa6.61□□□□□ -1.35
SREBF1-223ENST00000584760 FCGBPQ9Y6R7 5405 aaPredicted RBP6.6□□□□□ -1.35
SREBF1-223ENST00000584760 MRPL34Q9BQ48 92 aaKnown RBP6.6□□□□□ -1.35
SREBF1-223ENST00000584760 PRO0461Q9UI25 63 aa6.6□□□□□ -1.35
SREBF1-223ENST00000584760 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
SREBF1-223ENST00000584760 K7EP34 96 aa6.58□□□□□ -1.36
SREBF1-223ENST00000584760 BPY2O14599 106 aa6.58□□□□□ -1.36
SREBF1-223ENST00000584760 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
SREBF1-223ENST00000584760 WFDC13Q8IUB5 93 aa6.55□□□□□ -1.36
SREBF1-223ENST00000584760 LCE2BO14633 110 aa6.53□□□□□ -1.36
SREBF1-223ENST00000584760 MT2AP02795 61 aa6.53□□□□□ -1.36
SREBF1-223ENST00000584760 Q8N9L7 120 aa6.53□□□□□ -1.36
SREBF1-223ENST00000584760 NDUFS5O43920 106 aa6.51□□□□□ -1.37
SREBF1-223ENST00000584760 LINC00846Q9NV44 126 aa6.51□□□□□ -1.37
SREBF1-223ENST00000584760 MT1FP04733 61 aa6.49□□□□□ -1.37
SREBF1-223ENST00000584760 CASC2Q6XLA1 102 aa6.48□□□□□ -1.37
SREBF1-223ENST00000584760 PCP4L1A6NKN8 68 aa6.47□□□□□ -1.37
SREBF1-223ENST00000584760 Q5W150 140 aa6.47□□□□□ -1.37
SREBF1-223ENST00000584760 GTF2H5Q6ZYL4 71 aa6.47□□□□□ -1.37
SREBF1-223ENST00000584760 UBL5Q9BZL1 73 aa6.47□□□□□ -1.37
SREBF1-223ENST00000584760 KRTAP10-10P60014 251 aa6.46□□□□□ -1.38
SREBF1-223ENST00000584760 KRTAP9-3Q9BYQ3 159 aa6.46□□□□□ -1.38
SREBF1-223ENST00000584760 HCG22E2RYF7 251 aa6.45□□□□□ -1.38
SREBF1-223ENST00000584760 MACF1Q9UPN3 7388 aaKnown RBP6.44□□□□□ -1.38
SREBF1-223ENST00000584760 IGKV2D-30A0A075B6S6 120 aa6.43□□□□□ -1.38
SREBF1-223ENST00000584760 F8W1H4 67 aa6.43□□□□□ -1.38
SREBF1-223ENST00000584760 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
SREBF1-223ENST00000584760 C7orf65Q6ZTY9 151 aa6.43□□□□□ -1.38
SREBF1-223ENST00000584760 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
SREBF1-223ENST00000584760 CXCL6P80162 114 aa6.41□□□□□ -1.38
SREBF1-223ENST00000584760 ETDBQ3ZM63 59 aa6.41□□□□□ -1.38
SREBF1-223ENST00000584760 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
SREBF1-223ENST00000584760 KRTAP19-6Q3LI70 58 aa6.34□□□□□ -1.39
SREBF1-223ENST00000584760 C4orf26Q17RF5 130 aa6.32□□□□□ -1.4
SREBF1-223ENST00000584760 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
SREBF1-223ENST00000584760 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
SREBF1-223ENST00000584760 FAM240AA0A1B0GVK7 77 aa6.27□□□□□ -1.41
SREBF1-223ENST00000584760 ACYP1P07311 99 aa6.25□□□□□ -1.41
SREBF1-223ENST00000584760 KRTAP3-1Q9BYR8 98 aa6.25□□□□□ -1.41
SREBF1-223ENST00000584760 ATP5EP2Q5VTU8 51 aa6.22□□□□□ -1.41
SREBF1-223ENST00000584760 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
SREBF1-223ENST00000584760 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
SREBF1-223ENST00000584760 C1orf64Q8NEQ6 169 aa6.2□□□□□ -1.42
SREBF1-223ENST00000584760 TRAV22A0A0B4J277 110 aa6.18□□□□□ -1.42
SREBF1-223ENST00000584760 S4R3F8 94 aa6.18□□□□□ -1.42
SREBF1-223ENST00000584760 C5orf47Q569G3 176 aa6.17□□□□□ -1.42
SREBF1-223ENST00000584760 CYP4F30PQ9H0H9 118 aa6.17□□□□□ -1.42
SREBF1-223ENST00000584760 HIST1H4AP62805 103 aaKnown RBP6.15□□□□□ -1.42
SREBF1-223ENST00000584760 LCA10Q71F78 164 aa6.15□□□□□ -1.42
SREBF1-223ENST00000584760 A0A1B0GV90 55 aa6.13□□□□□ -1.43
SREBF1-223ENST00000584760 LOC101927531A0A1B0GV80 90 aa6.12□□□□□ -1.43
SREBF1-223ENST00000584760 LINC00643Q86TS7 51 aa6.12□□□□□ -1.43
SREBF1-223ENST00000584760 A0A087WVE0 104 aa6.1□□□□□ -1.43
SREBF1-223ENST00000584760 UQCRQO14949 82 aa6.1□□□□□ -1.43
SREBF1-223ENST00000584760 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
SREBF1-223ENST00000584760 FAM236AA0A1B0GUQ0 79 aa6.07□□□□□ -1.44
SREBF1-223ENST00000584760 FAM236BA0A1B0GV22 79 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms