RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 SERP2Q8N6R1 65 aa10.34□□□□□ -0.75
EIF4A1-216ENST00000580888 DEFB116Q30KQ4 102 aa10.33□□□□□ -0.76
EIF4A1-216ENST00000580888 Q5XG85 94 aa10.33□□□□□ -0.76
EIF4A1-216ENST00000580888 HRCT1Q6UXD1 115 aa10.33□□□□□ -0.76
EIF4A1-216ENST00000580888 A8MWP4 228 aa10.32□□□□□ -0.76
EIF4A1-216ENST00000580888 PRR15Q8IV56 129 aa10.32□□□□□ -0.76
EIF4A1-216ENST00000580888 SMIM20Q8N5G0 67 aa10.32□□□□□ -0.76
EIF4A1-216ENST00000580888 CCDC179H3BU77 68 aa10.31□□□□□ -0.76
EIF4A1-216ENST00000580888 UQCRQO14949 82 aa10.31□□□□□ -0.76
EIF4A1-216ENST00000580888 RNF213Q63HN8 5207 aa10.29□□□□□ -0.76
EIF4A1-216ENST00000580888 TRAV7A0A075B6U4 112 aa10.29□□□□□ -0.76
EIF4A1-216ENST00000580888 HCG22E2RYF7 251 aa10.26□□□□□ -0.77
EIF4A1-216ENST00000580888 OCR1Q9BZK8 76 aa10.25□□□□□ -0.77
EIF4A1-216ENST00000580888 TYMSOSQ8TAI1 123 aa10.22□□□□□ -0.77
EIF4A1-216ENST00000580888 NDUFB1O75438 58 aa10.21□□□□□ -0.77
EIF4A1-216ENST00000580888 LPAP08519 4548 aa10.2□□□□□ -0.78
EIF4A1-216ENST00000580888 PRR26Q8N8Z3 221 aa10.2□□□□□ -0.78
EIF4A1-216ENST00000580888 MMP24-AS1A0A0U1RRL7 71 aa10.19□□□□□ -0.78
EIF4A1-216ENST00000580888 A0A1B0GVX0 72 aa10.18□□□□□ -0.78
EIF4A1-216ENST00000580888 RPS29P62273 56 aaKnown RBP10.18□□□□□ -0.78
EIF4A1-216ENST00000580888 SPINK1P00995 79 aa10.16□□□□□ -0.78
EIF4A1-216ENST00000580888 LIMD2Q9BT23 127 aa10.16□□□□□ -0.78
EIF4A1-216ENST00000580888 C1orf195Q5TG92 126 aa10.15□□□□□ -0.78
EIF4A1-216ENST00000580888 SPAG11AQ6PDA7 123 aa10.15□□□□□ -0.78
EIF4A1-216ENST00000580888 CASC2Q6XLA1 102 aa10.14□□□□□ -0.79
EIF4A1-216ENST00000580888 C8orf17Q9NRJ1 99 aa10.14□□□□□ -0.79
EIF4A1-216ENST00000580888 WFDC13Q8IUB5 93 aa10.13□□□□□ -0.79
EIF4A1-216ENST00000580888 C4orf48Q5BLP8 95 aa10.12□□□□□ -0.79
EIF4A1-216ENST00000580888 LINC00304Q8N9R0 145 aa10.11□□□□□ -0.79
EIF4A1-216ENST00000580888 KLKP1Q107X0 134 aa10.1□□□□□ -0.79
EIF4A1-216ENST00000580888 hDV103S1A0JD37 113 aa10.09□□□□□ -0.79
EIF4A1-216ENST00000580888 IGHV6-1A0A0B4J1U7 121 aa10.07□□□□□ -0.8
EIF4A1-216ENST00000580888 C20orf197Q8N268 126 aa10.07□□□□□ -0.8
EIF4A1-216ENST00000580888 CYSTM1Q9H1C7 97 aa10.07□□□□□ -0.8
EIF4A1-216ENST00000580888 C8orf87E5RJ46 101 aa10.06□□□□□ -0.8
EIF4A1-216ENST00000580888 NOTCH2NLQ7Z3S9 236 aa10.06□□□□□ -0.8
EIF4A1-216ENST00000580888 TMEM254Q8TBM7 123 aa10.06□□□□□ -0.8
EIF4A1-216ENST00000580888 A0A0U1RQV1 116 aa10.04□□□□□ -0.8
EIF4A1-216ENST00000580888 C5orf47Q569G3 176 aa10.04□□□□□ -0.8
EIF4A1-216ENST00000580888 MRPL34Q9BQ48 92 aaKnown RBP10.01□□□□□ -0.81
EIF4A1-216ENST00000580888 ZCCHC13Q8WW36 166 aaKnown RBP9.99□□□□□ -0.81
EIF4A1-216ENST00000580888 TP53AIP1Q9HCN2 124 aa9.99□□□□□ -0.81
EIF4A1-216ENST00000580888 SNURFQ9Y675 71 aa9.97□□□□□ -0.81
EIF4A1-216ENST00000580888 H7BZZ5 65 aa9.96□□□□□ -0.82
EIF4A1-216ENST00000580888 NDUFC1O43677 76 aa9.96□□□□□ -0.82
EIF4A1-216ENST00000580888 LINC00313P59037 77 aa9.95□□□□□ -0.82
EIF4A1-216ENST00000580888 PRR4Q16378 134 aa9.95□□□□□ -0.82
EIF4A1-216ENST00000580888 H3BPC8 53 aa9.94□□□□□ -0.82
EIF4A1-216ENST00000580888 TMEM258P61165 79 aa9.94□□□□□ -0.82
EIF4A1-216ENST00000580888 KRTAP16-1A8MUX0 517 aa9.93□□□□□ -0.82
EIF4A1-216ENST00000580888 Q8N9P0 234 aaPredicted RBP9.92□□□□□ -0.82
EIF4A1-216ENST00000580888 MUC2Q02817 5179 aa9.91□□□□□ -0.82
EIF4A1-216ENST00000580888 H0Y9P7 68 aa9.89□□□□□ -0.83
EIF4A1-216ENST00000580888 MP68P56378 58 aa9.89□□□□□ -0.83
EIF4A1-216ENST00000580888 TRAV22A0A0B4J277 110 aa9.88□□□□□ -0.83
EIF4A1-216ENST00000580888 KRTAP13-3Q3SY46 172 aa9.86□□□□□ -0.83
EIF4A1-216ENST00000580888 MUC17Q685J3 4493 aa9.84□□□□□ -0.83
EIF4A1-216ENST00000580888 NDUFS5O43920 106 aa9.83□□□□□ -0.84
EIF4A1-216ENST00000580888 LINC00208Q96KT6 92 aa9.83□□□□□ -0.84
EIF4A1-216ENST00000580888 C1orf64Q8NEQ6 169 aa9.8□□□□□ -0.84
EIF4A1-216ENST00000580888 Q5W150 140 aa9.79□□□□□ -0.84
EIF4A1-216ENST00000580888 FAM236DA0A1B0GTK5 79 aa9.78□□□□□ -0.84
EIF4A1-216ENST00000580888 FAM236CP0DP71 79 aa9.78□□□□□ -0.84
EIF4A1-216ENST00000580888 ATP5EP56381 51 aaPredicted RBP9.77□□□□□ -0.85
EIF4A1-216ENST00000580888 TPRXLQ17RH7 258 aa9.74□□□□□ -0.85
EIF4A1-216ENST00000580888 RETNLBQ9BQ08 111 aa9.74□□□□□ -0.85
EIF4A1-216ENST00000580888 RPS28P62857 69 aaKnown RBP9.73□□□□□ -0.85
EIF4A1-216ENST00000580888 FAT4Q6V0I7 4981 aa9.72□□□□□ -0.85
EIF4A1-216ENST00000580888 FP248Q71RG6 208 aaPredicted RBP9.72□□□□□ -0.85
EIF4A1-216ENST00000580888 C20orf166-AS1Q96NR2 134 aa9.71□□□□□ -0.86
EIF4A1-216ENST00000580888 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
EIF4A1-216ENST00000580888 A8MUU9 505 aa9.7□□□□□ -0.86
EIF4A1-216ENST00000580888 IGLV7-46A0A075B6I9 117 aa9.69□□□□□ -0.86
EIF4A1-216ENST00000580888 SPANXA2-OT1Q8N9U9 137 aa9.69□□□□□ -0.86
EIF4A1-216ENST00000580888 CYP4F30PQ9H0H9 118 aa9.66□□□□□ -0.86
EIF4A1-216ENST00000580888 SERP1Q9Y6X1 66 aa9.64□□□□□ -0.87
EIF4A1-216ENST00000580888 C9orf92A6NGG3 77 aa9.62□□□□□ -0.87
EIF4A1-216ENST00000580888 IGKV2-30P06310 120 aa9.62□□□□□ -0.87
EIF4A1-216ENST00000580888 LCE2AQ5TA79 106 aaPredicted RBP9.6□□□□□ -0.87
EIF4A1-216ENST00000580888 Q75L30 129 aa9.58□□□□□ -0.88
EIF4A1-216ENST00000580888 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
EIF4A1-216ENST00000580888 HRES1P13985 223 aa9.47□□□□□ -0.89
EIF4A1-216ENST00000580888 XP32Q5T750 250 aa9.45□□□□□ -0.9
EIF4A1-216ENST00000580888 C7orf65Q6ZTY9 151 aa9.45□□□□□ -0.9
EIF4A1-216ENST00000580888 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
EIF4A1-216ENST00000580888 RPL37P61927 97 aaKnown RBP9.44□□□□□ -0.9
EIF4A1-216ENST00000580888 KRTAP9-2Q9BYQ4 174 aa9.44□□□□□ -0.9
EIF4A1-216ENST00000580888 SMIM26A0A096LP01 95 aa9.4□□□□□ -0.9
EIF4A1-216ENST00000580888 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.9
EIF4A1-216ENST00000580888 DMAC1Q96GE9 116 aa9.39□□□□□ -0.91
EIF4A1-216ENST00000580888 KRTAP4-1Q9BYQ7 146 aa9.38□□□□□ -0.91
EIF4A1-216ENST00000580888 ATP11AUNQ6ZP68 121 aa9.34□□□□□ -0.91
EIF4A1-216ENST00000580888 COA5Q86WW8 74 aa9.34□□□□□ -0.91
EIF4A1-216ENST00000580888 SPINK7P58062 85 aa9.33□□□□□ -0.92
EIF4A1-216ENST00000580888 ACYP2P14621 99 aa9.31□□□□□ -0.92
EIF4A1-216ENST00000580888 A8MUN3 132 aa9.25□□□□□ -0.93
EIF4A1-216ENST00000580888 Q1T7F1 81 aa9.22□□□□□ -0.93
EIF4A1-216ENST00000580888 C4orf26Q17RF5 130 aa9.21□□□□□ -0.94
EIF4A1-216ENST00000580888 KRTAP3-1Q9BYR8 98 aa9.2□□□□□ -0.94
EIF4A1-216ENST00000580888 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms