RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 TNRC18O15417 2968 aaPredicted RBP8.23□□□□□ -1.09
ITGB4-206ENST00000579662 NIPBLQ6KC79 2804 aaeCLIP8.22□□□□□ -1.09
ITGB4-206ENST00000579662 ADGRG4Q8IZF6 3080 aa8.21□□□□□ -1.09
ITGB4-206ENST00000579662 EYSQ5T1H1 3165 aa8.21□□□□□ -1.09
ITGB4-206ENST00000579662 KRTAP25-1Q3LHN0 102 aa8.21□□□□□ -1.1
ITGB4-206ENST00000579662 DMXL2Q8TDJ6 3036 aa8.21□□□□□ -1.1
ITGB4-206ENST00000579662 CELSR3Q9NYQ7 3312 aa8.21□□□□□ -1.1
ITGB4-206ENST00000579662 VCANP13611 3396 aa8.17□□□□□ -1.1
ITGB4-206ENST00000579662 XP32Q5T750 250 aa8.17□□□□□ -1.1
ITGB4-206ENST00000579662 BOD1L1Q8NFC6 3051 aa8.15□□□□□ -1.1
ITGB4-206ENST00000579662 H3BS24 57 aa8.13□□□□□ -1.11
ITGB4-206ENST00000579662 COL6A3P12111 3177 aa8.12□□□□□ -1.11
ITGB4-206ENST00000579662 TENM4Q6N022 2769 aa8.11□□□□□ -1.11
ITGB4-206ENST00000579662 TPRXLQ17RH7 258 aa8.1□□□□□ -1.11
ITGB4-206ENST00000579662 NBEAQ8NFP9 2946 aa8.09□□□□□ -1.11
ITGB4-206ENST00000579662 ZZEF1O43149 2961 aa8.08□□□□□ -1.12
ITGB4-206ENST00000579662 DNAH14Q0VDD8 3507 aa8.08□□□□□ -1.12
ITGB4-206ENST00000579662 TNP1P09430 55 aa8.07□□□□□ -1.12
ITGB4-206ENST00000579662 HRNRQ86YZ3 2850 aaPredicted RBP8.07□□□□□ -1.12
ITGB4-206ENST00000579662 KRTAP16-1A8MUX0 517 aa8.04□□□□□ -1.12
ITGB4-206ENST00000579662 SPTBN5Q9NRC6 3674 aaKnown RBP8□□□□□ -1.13
ITGB4-206ENST00000579662 ZANQ9Y493 2812 aa7.97□□□□□ -1.13
ITGB4-206ENST00000579662 CELSR2Q9HCU4 2923 aa7.97□□□□□ -1.13
ITGB4-206ENST00000579662 ASH1LQ9NR48 2969 aaKnown RBP7.96□□□□□ -1.14
ITGB4-206ENST00000579662 CRYBG3Q68DQ2 2970 aa7.95□□□□□ -1.14
ITGB4-206ENST00000579662 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
ITGB4-206ENST00000579662 FREM2Q5SZK8 3169 aa7.95□□□□□ -1.14
ITGB4-206ENST00000579662 USP34Q70CQ2 3546 aa7.94□□□□□ -1.14
ITGB4-206ENST00000579662 DCHS2Q6V1P9 2916 aa7.93□□□□□ -1.14
ITGB4-206ENST00000579662 A0A1B0GVY2 172 aa7.93□□□□□ -1.14
ITGB4-206ENST00000579662 DMXL1Q9Y485 3027 aa7.93□□□□□ -1.14
ITGB4-206ENST00000579662 REV3LO60673 3130 aa7.92□□□□□ -1.14
ITGB4-206ENST00000579662 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
ITGB4-206ENST00000579662 KRTAP10-8P60410 259 aa7.84□□□□□ -1.15
ITGB4-206ENST00000579662 H0YAA0 97 aa7.83□□□□□ -1.16
ITGB4-206ENST00000579662 CFAP47Q6ZTR5 3102 aa7.81□□□□□ -1.16
ITGB4-206ENST00000579662 NF1P21359 2839 aa7.77□□□□□ -1.17
ITGB4-206ENST00000579662 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
ITGB4-206ENST00000579662 NDUFAF8A1L188 74 aa7.73□□□□□ -1.17
ITGB4-206ENST00000579662 FBN2P35556 2912 aa7.73□□□□□ -1.17
ITGB4-206ENST00000579662 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
ITGB4-206ENST00000579662 MXRA5Q9NR99 2828 aa7.67□□□□□ -1.18
ITGB4-206ENST00000579662 PRO2289Q9P1D8 64 aa7.67□□□□□ -1.18
ITGB4-206ENST00000579662 P0C880 135 aa7.67□□□□□ -1.18
ITGB4-206ENST00000579662 TENM2Q9NT68 2774 aa7.66□□□□□ -1.18
ITGB4-206ENST00000579662 LOC400499M0QZD8 3231 aa7.63□□□□□ -1.19
ITGB4-206ENST00000579662 TENM1Q9UKZ4 2725 aa7.63□□□□□ -1.19
ITGB4-206ENST00000579662 SPEGQ15772 3267 aa7.63□□□□□ -1.19
ITGB4-206ENST00000579662 PDZD2O15018 2839 aa7.6□□□□□ -1.19
ITGB4-206ENST00000579662 CELSR1Q9NYQ6 3014 aa7.59□□□□□ -1.19
ITGB4-206ENST00000579662 TENM3Q9P273 2699 aa7.58□□□□□ -1.2
ITGB4-206ENST00000579662 TGP01266 2768 aa7.46□□□□□ -1.21
ITGB4-206ENST00000579662 KRTAP12-2P59991 146 aa7.37□□□□□ -1.23
ITGB4-206ENST00000579662 ANK3Q12955 4377 aaKnown RBP7.36□□□□□ -1.23
ITGB4-206ENST00000579662 OTOGQ6ZRI0 2925 aa7.35□□□□□ -1.23
ITGB4-206ENST00000579662 MYO15AQ9UKN7 3530 aa7.35□□□□□ -1.23
ITGB4-206ENST00000579662 KRTAP3-1Q9BYR8 98 aa7.35□□□□□ -1.23
ITGB4-206ENST00000579662 RELNP78509 3460 aa7.34□□□□□ -1.23
ITGB4-206ENST00000579662 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
ITGB4-206ENST00000579662 WDFY3Q8IZQ1 3526 aa7.29□□□□□ -1.24
ITGB4-206ENST00000579662 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
ITGB4-206ENST00000579662 PKD1L1Q8TDX9 2849 aa7.25□□□□□ -1.25
ITGB4-206ENST00000579662 DCHS1Q96JQ0 3298 aa7.22□□□□□ -1.25
ITGB4-206ENST00000579662 NBPF19A0A087WUL8 3843 aa7.21□□□□□ -1.26
ITGB4-206ENST00000579662 VWFP04275 2813 aa7.2□□□□□ -1.26
ITGB4-206ENST00000579662 MT1HL1P0DM35 61 aa7.17□□□□□ -1.26
ITGB4-206ENST00000579662 ASPMQ8IZT6 3477 aa7.16□□□□□ -1.26
ITGB4-206ENST00000579662 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
ITGB4-206ENST00000579662 FBN1P35555 2871 aaKnown RBP7.12□□□□□ -1.27
ITGB4-206ENST00000579662 LAMA5O15230 3695 aa7.09□□□□□ -1.27
ITGB4-206ENST00000579662 ZFHX4Q86UP3 3567 aa7.05□□□□□ -1.28
ITGB4-206ENST00000579662 KRTAP10-4P60372 401 aaPredicted RBP7.05□□□□□ -1.28
ITGB4-206ENST00000579662 ALMS1Q8TCU4 4167 aa6.95□□□□□ -1.3
ITGB4-206ENST00000579662 HUWE1Q7Z6Z7 4374 aaKnown RBP6.95□□□□□ -1.3
ITGB4-206ENST00000579662 DMDP11532 3685 aa6.93□□□□□ -1.3
ITGB4-206ENST00000579662 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
ITGB4-206ENST00000579662 MUC3AQ02505 3323 aa6.91□□□□□ -1.3
ITGB4-206ENST00000579662 FBN3Q75N90 2809 aa6.91□□□□□ -1.3
ITGB4-206ENST00000579662 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
ITGB4-206ENST00000579662 MEGF8Q7Z7M0 2845 aa6.9□□□□□ -1.3
ITGB4-206ENST00000579662 ZFHX3Q15911 3703 aa6.9□□□□□ -1.31
ITGB4-206ENST00000579662 CSMD1Q96PZ7 3565 aa6.89□□□□□ -1.31
ITGB4-206ENST00000579662 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
ITGB4-206ENST00000579662 SMG1Q96Q15 3661 aaKnown RBP6.88□□□□□ -1.31
ITGB4-206ENST00000579662 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
ITGB4-206ENST00000579662 TRRAPQ9Y4A5 3859 aa6.81□□□□□ -1.32
ITGB4-206ENST00000579662 BSNQ9UPA5 3926 aa6.73□□□□□ -1.33
ITGB4-206ENST00000579662 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
ITGB4-206ENST00000579662 SPENQ96T58 3664 aaKnown RBP6.72□□□□□ -1.33
ITGB4-206ENST00000579662 CSMD2Q7Z408 3487 aa6.71□□□□□ -1.34
ITGB4-206ENST00000579662 SRRM2Q9UQ35 2752 aaKnown RBP6.67□□□□□ -1.34
ITGB4-206ENST00000579662 SVEP1Q4LDE5 3571 aa6.65□□□□□ -1.35
ITGB4-206ENST00000579662 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
ITGB4-206ENST00000579662 COL7A1Q02388 2944 aa6.62□□□□□ -1.35
ITGB4-206ENST00000579662 DNAH9Q9NYC9 4486 aa6.61□□□□□ -1.35
ITGB4-206ENST00000579662 CUBNO60494 3623 aa6.61□□□□□ -1.35
ITGB4-206ENST00000579662 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
ITGB4-206ENST00000579662 DNAH5Q8TE73 4624 aa6.48□□□□□ -1.37
ITGB4-206ENST00000579662 INE1O15225 51 aa6.47□□□□□ -1.37
ITGB4-206ENST00000579662 DNAH10Q8IVF4 4471 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms