RNA–Protein interactions for RNA: ENST00000578618.5

EPB41L3-214, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 1 (best)

Gene EPB41L3, Length 4,908 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-214ENST00000578618 FLNCQ14315 2725 aa5.36□□□□□ -1.55
EPB41L3-214ENST00000578618 KRTAP7-1Q8IUC3 87 aa5.34□□□□□ -1.55
EPB41L3-214ENST00000578618 H0YAA0 97 aa5.34□□□□□ -1.55
EPB41L3-214ENST00000578618 MUC3AQ02505 3323 aa5.34□□□□□ -1.56
EPB41L3-214ENST00000578618 PLAC4Q8WY50 150 aa5.34□□□□□ -1.56
EPB41L3-214ENST00000578618 R4GN34 69 aa5.34□□□□□ -1.56
EPB41L3-214ENST00000578618 MYO15AQ9UKN7 3530 aa5.31□□□□□ -1.56
EPB41L3-214ENST00000578618 WDFY3Q8IZQ1 3526 aa5.29□□□□□ -1.56
EPB41L3-214ENST00000578618 UTP20O75691 2785 aaKnown RBP5.28□□□□□ -1.56
EPB41L3-214ENST00000578618 M0QZ58 72 aa5.28□□□□□ -1.56
EPB41L3-214ENST00000578618 SMR3BP02814 79 aaPredicted RBP5.28□□□□□ -1.56
EPB41L3-214ENST00000578618 KMT2BQ9UMN6 2715 aaPredicted RBP5.28□□□□□ -1.56
EPB41L3-214ENST00000578618 KRTAP1-5Q9BYS1 174 aa5.27□□□□□ -1.57
EPB41L3-214ENST00000578618 P0C880 135 aa5.25□□□□□ -1.57
EPB41L3-214ENST00000578618 CRYBG3Q68DQ2 2970 aa5.25□□□□□ -1.57
EPB41L3-214ENST00000578618 APCP25054 2843 aa5.24□□□□□ -1.57
EPB41L3-214ENST00000578618 CELSR2Q9HCU4 2923 aa5.24□□□□□ -1.57
EPB41L3-214ENST00000578618 ITPR2Q14571 2701 aa5.22□□□□□ -1.57
EPB41L3-214ENST00000578618 HIVEP1P15822 2718 aa5.21□□□□□ -1.58
EPB41L3-214ENST00000578618 LOC400499M0QZD8 3231 aa5.19□□□□□ -1.58
EPB41L3-214ENST00000578618 KRTAP1-3Q8IUG1 177 aa5.17□□□□□ -1.58
EPB41L3-214ENST00000578618 DMXL1Q9Y485 3027 aa5.15□□□□□ -1.58
EPB41L3-214ENST00000578618 ZANQ9Y493 2812 aa5.15□□□□□ -1.59
EPB41L3-214ENST00000578618 KRTAP1-1Q07627 177 aa5.14□□□□□ -1.59
EPB41L3-214ENST00000578618 SPENQ96T58 3664 aaKnown RBP5.14□□□□□ -1.59
EPB41L3-214ENST00000578618 KRTAP13-1Q8IUC0 172 aa5.14□□□□□ -1.59
EPB41L3-214ENST00000578618 TENM4Q6N022 2769 aa5.11□□□□□ -1.59
EPB41L3-214ENST00000578618 DCHS2Q6V1P9 2916 aa5.11□□□□□ -1.59
EPB41L3-214ENST00000578618 ZFHX4Q86UP3 3567 aa5.11□□□□□ -1.59
EPB41L3-214ENST00000578618 KRTAP10-8P60410 259 aa5.08□□□□□ -1.6
EPB41L3-214ENST00000578618 TPRXLQ17RH7 258 aa5.07□□□□□ -1.6
EPB41L3-214ENST00000578618 NF1P21359 2839 aa5.07□□□□□ -1.6
EPB41L3-214ENST00000578618 NIPBLQ6KC79 2804 aaeCLIP5.07□□□□□ -1.6
EPB41L3-214ENST00000578618 BSNQ9UPA5 3926 aa5.06□□□□□ -1.6
EPB41L3-214ENST00000578618 ASPMQ8IZT6 3477 aa5.05□□□□□ -1.6
EPB41L3-214ENST00000578618 DCHS1Q96JQ0 3298 aa5.05□□□□□ -1.6
EPB41L3-214ENST00000578618 FBN2P35556 2912 aa5.04□□□□□ -1.6
EPB41L3-214ENST00000578618 KRTAP13-2Q52LG2 175 aa5.02□□□□□ -1.61
EPB41L3-214ENST00000578618 KRTAP13-3Q3SY46 172 aa5□□□□□ -1.61
EPB41L3-214ENST00000578618 J3QL48 77 aa4.99□□□□□ -1.61
EPB41L3-214ENST00000578618 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
EPB41L3-214ENST00000578618 TGP01266 2768 aa4.98□□□□□ -1.61
EPB41L3-214ENST00000578618 TENM3Q9P273 2699 aa4.97□□□□□ -1.61
EPB41L3-214ENST00000578618 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
EPB41L3-214ENST00000578618 RELNP78509 3460 aa4.95□□□□□ -1.62
EPB41L3-214ENST00000578618 KRTAP10-2P60368 255 aa4.95□□□□□ -1.62
EPB41L3-214ENST00000578618 KRTAP10-1P60331 282 aa4.94□□□□□ -1.62
EPB41L3-214ENST00000578618 PKD1L1Q8TDX9 2849 aa4.94□□□□□ -1.62
EPB41L3-214ENST00000578618 LAMA5O15230 3695 aa4.94□□□□□ -1.62
EPB41L3-214ENST00000578618 TNP1P09430 55 aa4.93□□□□□ -1.62
EPB41L3-214ENST00000578618 CELSR1Q9NYQ6 3014 aa4.9□□□□□ -1.63
EPB41L3-214ENST00000578618 CUBNO60494 3623 aa4.89□□□□□ -1.63
EPB41L3-214ENST00000578618 Q6ZRN7 208 aaPredicted RBP4.89□□□□□ -1.63
EPB41L3-214ENST00000578618 RPS29P62273 56 aaKnown RBP4.88□□□□□ -1.63
EPB41L3-214ENST00000578618 SRRM2Q9UQ35 2752 aaKnown RBP4.87□□□□□ -1.63
EPB41L3-214ENST00000578618 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
EPB41L3-214ENST00000578618 ZFHX3Q15911 3703 aa4.86□□□□□ -1.63
EPB41L3-214ENST00000578618 VWFP04275 2813 aa4.85□□□□□ -1.63
EPB41L3-214ENST00000578618 PDZD2O15018 2839 aa4.85□□□□□ -1.63
EPB41L3-214ENST00000578618 TENM1Q9UKZ4 2725 aa4.83□□□□□ -1.64
EPB41L3-214ENST00000578618 M0R2T5 61 aa4.8□□□□□ -1.64
EPB41L3-214ENST00000578618 HRNRQ86YZ3 2850 aaPredicted RBP4.78□□□□□ -1.64
EPB41L3-214ENST00000578618 FBN1P35555 2871 aaKnown RBP4.77□□□□□ -1.65
EPB41L3-214ENST00000578618 CSMD1Q96PZ7 3565 aa4.77□□□□□ -1.65
EPB41L3-214ENST00000578618 MXRA5Q9NR99 2828 aa4.75□□□□□ -1.65
EPB41L3-214ENST00000578618 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
EPB41L3-214ENST00000578618 SMG1Q96Q15 3661 aaKnown RBP4.75□□□□□ -1.65
EPB41L3-214ENST00000578618 TENM2Q9NT68 2774 aa4.72□□□□□ -1.65
EPB41L3-214ENST00000578618 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.65
EPB41L3-214ENST00000578618 KRTAP1-4P0C5Y4 121 aa4.7□□□□□ -1.66
EPB41L3-214ENST00000578618 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
EPB41L3-214ENST00000578618 KRTAP3-1Q9BYR8 98 aa4.68□□□□□ -1.66
EPB41L3-214ENST00000578618 VPS13CQ709C8 3753 aa4.66□□□□□ -1.66
EPB41L3-214ENST00000578618 XP32Q5T750 250 aa4.65□□□□□ -1.67
EPB41L3-214ENST00000578618 Q5VSD8 79 aa4.64□□□□□ -1.67
EPB41L3-214ENST00000578618 KRTAP10-6P60371 365 aaPredicted RBP4.63□□□□□ -1.67
EPB41L3-214ENST00000578618 SVEP1Q4LDE5 3571 aa4.62□□□□□ -1.67
EPB41L3-214ENST00000578618 INE1O15225 51 aa4.62□□□□□ -1.67
EPB41L3-214ENST00000578618 NBPF19A0A087WUL8 3843 aa4.57□□□□□ -1.68
EPB41L3-214ENST00000578618 CSMD2Q7Z408 3487 aa4.56□□□□□ -1.68
EPB41L3-214ENST00000578618 OTOGQ6ZRI0 2925 aa4.55□□□□□ -1.68
EPB41L3-214ENST00000578618 AKAP9Q99996 3911 aa4.55□□□□□ -1.68
EPB41L3-214ENST00000578618 ANK3Q12955 4377 aaKnown RBP4.51□□□□□ -1.69
EPB41L3-214ENST00000578618 ZNF469Q96JG9 3925 aaPredicted RBP4.5□□□□□ -1.69
EPB41L3-214ENST00000578618 COL7A1Q02388 2944 aa4.46□□□□□ -1.7
EPB41L3-214ENST00000578618 KRTAP21-3Q3LHN1 58 aa4.45□□□□□ -1.7
EPB41L3-214ENST00000578618 KRTAP3-2Q9BYR7 98 aa4.44□□□□□ -1.7
EPB41L3-214ENST00000578618 A0A1B0GVY2 172 aa4.43□□□□□ -1.7
EPB41L3-214ENST00000578618 MEGF8Q7Z7M0 2845 aa4.38□□□□□ -1.71
EPB41L3-214ENST00000578618 FBN3Q75N90 2809 aa4.38□□□□□ -1.71
EPB41L3-214ENST00000578618 KRTAP3-3Q9BYR6 98 aa4.35□□□□□ -1.71
EPB41L3-214ENST00000578618 CMYA5Q8N3K9 4069 aa4.3□□□□□ -1.72
EPB41L3-214ENST00000578618 TRRAPQ9Y4A5 3859 aa4.24□□□□□ -1.73
EPB41L3-214ENST00000578618 DNAH3Q8TD57 4116 aa4.22□□□□□ -1.73
EPB41L3-214ENST00000578618 ANK2Q01484 3957 aa4.2□□□□□ -1.74
EPB41L3-214ENST00000578618 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
EPB41L3-214ENST00000578618 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
EPB41L3-214ENST00000578618 HUWE1Q7Z6Z7 4374 aaKnown RBP4.1□□□□□ -1.75
EPB41L3-214ENST00000578618 CSMD3Q7Z407 3707 aa4.09□□□□□ -1.75
EPB41L3-214ENST00000578618 ALMS1Q8TCU4 4167 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms