RNA–Protein interactions for RNA: ENST00000578618.5

EPB41L3-214, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 1 (best)

Gene EPB41L3, Length 4,908 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-214ENST00000578618 PELP1Q8IZL8 1130 aaKnown RBP15.94■□□□□ 0.14
EPB41L3-214ENST00000578618 MYT1Q01538 1121 aa15.8■□□□□ 0.12
EPB41L3-214ENST00000578618 PCGF6Q9BYE7 350 aa14.92□□□□□ -0.02
EPB41L3-214ENST00000578618 CENPBP07199 599 aaPredicted RBP14.88□□□□□ -0.03
EPB41L3-214ENST00000578618 ERICH6Q7L0X2 663 aa14.73□□□□□ -0.05
EPB41L3-214ENST00000578618 HRCP23327 699 aa14.71□□□□□ -0.05
EPB41L3-214ENST00000578618 SUPT5HO00267 1087 aaKnown RBP14.65□□□□□ -0.06
EPB41L3-214ENST00000578618 TTBK1Q5TCY1 1321 aaPredicted RBP14.61□□□□□ -0.07
EPB41L3-214ENST00000578618 ZEB1P37275 1124 aaPredicted RBP14.53□□□□□ -0.08
EPB41L3-214ENST00000578618 PPARGC1BQ86YN6 1023 aaKnown RBP14.49□□□□□ -0.09
EPB41L3-214ENST00000578618 YTHDC1Q96MU7 727 aaKnown RBP14.45□□□□□ -0.1
EPB41L3-214ENST00000578618 CCER1Q8TC90 406 aaPredicted RBP14.44□□□□□ -0.1
EPB41L3-214ENST00000578618 EHMT2Q96KQ7 1210 aa14.24□□□□□ -0.13
EPB41L3-214ENST00000578618 GTF3C3Q9Y5Q9 886 aa14.22□□□□□ -0.13
EPB41L3-214ENST00000578618 DCAF8L2P0C7V8 631 aa14.15□□□□□ -0.14
EPB41L3-214ENST00000578618 NEFLP07196 543 aa14.12□□□□□ -0.15
EPB41L3-214ENST00000578618 NISCHQ9Y2I1 1504 aa14.12□□□□□ -0.15
EPB41L3-214ENST00000578618 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
EPB41L3-214ENST00000578618 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
EPB41L3-214ENST00000578618 ACIN1Q9UKV3 1341 aaKnown RBP14□□□□□ -0.17
EPB41L3-214ENST00000578618 TRIM26Q12899 539 aaPredicted RBP13.98□□□□□ -0.17
EPB41L3-214ENST00000578618 BCL11AQ9H165 835 aa13.91□□□□□ -0.18
EPB41L3-214ENST00000578618 RTL5Q5HYW3 569 aaPredicted RBP13.88□□□□□ -0.19
EPB41L3-214ENST00000578618 DIEXFQ68CQ4 756 aaKnown RBP13.88□□□□□ -0.19
EPB41L3-214ENST00000578618 EIF5BO60841 1220 aaKnown RBP13.82□□□□□ -0.2
EPB41L3-214ENST00000578618 FAM9AQ8IZU1 332 aaPredicted RBP13.82□□□□□ -0.2
EPB41L3-214ENST00000578618 NEUROD1Q13562 356 aa13.72□□□□□ -0.21
EPB41L3-214ENST00000578618 BCANQ96GW7 911 aa13.72□□□□□ -0.21
EPB41L3-214ENST00000578618 ANP32EQ9BTT0 268 aa13.65□□□□□ -0.22
EPB41L3-214ENST00000578618 APLP2Q06481 763 aa13.64□□□□□ -0.23
EPB41L3-214ENST00000578618 DAXXQ9UER7 740 aaPredicted RBP13.63□□□□□ -0.23
EPB41L3-214ENST00000578618 GLIPR1L2Q4G1C9 344 aa13.61□□□□□ -0.23
EPB41L3-214ENST00000578618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
EPB41L3-214ENST00000578618 LOC105371045A0A1W2PR82 267 aa13.51□□□□□ -0.25
EPB41L3-214ENST00000578618 MYT1LQ9UL68 1186 aa13.49□□□□□ -0.25
EPB41L3-214ENST00000578618 CDK11AQ9UQ88 783 aaPredicted RBP13.47□□□□□ -0.25
EPB41L3-214ENST00000578618 PRKCSHP14314 528 aaPredicted RBP13.43□□□□□ -0.26
EPB41L3-214ENST00000578618 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
EPB41L3-214ENST00000578618 TRIM41Q8WV44 630 aa13.38□□□□□ -0.27
EPB41L3-214ENST00000578618 CHIC1Q5VXU3 224 aa13.37□□□□□ -0.27
EPB41L3-214ENST00000578618 NBR1Q14596 966 aa13.36□□□□□ -0.27
EPB41L3-214ENST00000578618 CLSPNQ9HAW4 1339 aa13.32□□□□□ -0.28
EPB41L3-214ENST00000578618 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
EPB41L3-214ENST00000578618 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
EPB41L3-214ENST00000578618 FKBP8Q14318 412 aa13.27□□□□□ -0.29
EPB41L3-214ENST00000578618 ANP32AP39687 249 aaKnown RBP13.25□□□□□ -0.29
EPB41L3-214ENST00000578618 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
EPB41L3-214ENST00000578618 RANGAP1P46060 587 aaPredicted RBP13.17□□□□□ -0.3
EPB41L3-214ENST00000578618 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.14□□□□□ -0.31
EPB41L3-214ENST00000578618 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
EPB41L3-214ENST00000578618 DEKP35659 375 aaKnown RBP13.11□□□□□ -0.31
EPB41L3-214ENST00000578618 CCDC136Q96JN2 1154 aa13.1□□□□□ -0.31
EPB41L3-214ENST00000578618 UBTFP17480 764 aaKnown RBP13.1□□□□□ -0.31
EPB41L3-214ENST00000578618 ITGAEP38570 1179 aa13.09□□□□□ -0.31
EPB41L3-214ENST00000578618 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
EPB41L3-214ENST00000578618 MIER1Q8N108 512 aa13.04□□□□□ -0.32
EPB41L3-214ENST00000578618 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
EPB41L3-214ENST00000578618 SUPT16HQ9Y5B9 1047 aaKnown RBP12.99□□□□□ -0.33
EPB41L3-214ENST00000578618 ANP32CO43423 234 aa12.96□□□□□ -0.33
EPB41L3-214ENST00000578618 NEFMP07197 916 aa12.95□□□□□ -0.34
EPB41L3-214ENST00000578618 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
EPB41L3-214ENST00000578618 ARXQ96QS3 562 aa12.93□□□□□ -0.34
EPB41L3-214ENST00000578618 POLR3GLQ9BT43 218 aa12.93□□□□□ -0.34
EPB41L3-214ENST00000578618 TSHZ2Q9NRE2 1034 aa12.93□□□□□ -0.34
EPB41L3-214ENST00000578618 ANO8Q9HCE9 1232 aaPredicted RBP12.92□□□□□ -0.34
EPB41L3-214ENST00000578618 RBM19Q9Y4C8 960 aaKnown RBP12.91□□□□□ -0.34
EPB41L3-214ENST00000578618 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
EPB41L3-214ENST00000578618 NAP1L5Q96NT1 182 aaPredicted RBP12.9□□□□□ -0.35
EPB41L3-214ENST00000578618 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
EPB41L3-214ENST00000578618 PKNOX2Q96KN3 472 aa12.85□□□□□ -0.35
EPB41L3-214ENST00000578618 PODXL2Q9NZ53 605 aa12.85□□□□□ -0.35
EPB41L3-214ENST00000578618 IRX6P78412 446 aaPredicted RBP12.85□□□□□ -0.35
EPB41L3-214ENST00000578618 NOP58Q9Y2X3 529 aaKnown RBP12.84□□□□□ -0.35
EPB41L3-214ENST00000578618 TRIM52Q96A61 297 aa12.84□□□□□ -0.35
EPB41L3-214ENST00000578618 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
EPB41L3-214ENST00000578618 TNNT2P45379 298 aaPredicted RBP12.83□□□□□ -0.36
EPB41L3-214ENST00000578618 ANP32BQ92688 251 aaKnown RBP12.82□□□□□ -0.36
EPB41L3-214ENST00000578618 ATP1B4Q9UN42 357 aaPredicted RBP12.81□□□□□ -0.36
EPB41L3-214ENST00000578618 HNRNPUQ00839 825 aaKnown RBP eCLIP12.77□□□□□ -0.37
EPB41L3-214ENST00000578618 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
EPB41L3-214ENST00000578618 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
EPB41L3-214ENST00000578618 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
EPB41L3-214ENST00000578618 A0A0U1RQG5 324 aaPredicted RBP12.74□□□□□ -0.37
EPB41L3-214ENST00000578618 SALL2Q9Y467 1007 aaPredicted RBP12.72□□□□□ -0.37
EPB41L3-214ENST00000578618 ARID4BQ4LE39 1312 aaPredicted RBP12.71□□□□□ -0.37
EPB41L3-214ENST00000578618 PPM1GO15355 546 aaPredicted RBP12.71□□□□□ -0.38
EPB41L3-214ENST00000578618 HSP90AA1P07900 732 aaKnown RBP12.7□□□□□ -0.38
EPB41L3-214ENST00000578618 TRIM44Q96DX7 344 aaPredicted RBP12.69□□□□□ -0.38
EPB41L3-214ENST00000578618 DDX10Q13206 875 aaKnown RBP12.67□□□□□ -0.38
EPB41L3-214ENST00000578618 TIMELESSQ9UNS1 1208 aa12.67□□□□□ -0.38
EPB41L3-214ENST00000578618 NCLP19338 710 aaKnown RBP12.63□□□□□ -0.39
EPB41L3-214ENST00000578618 HSP90AA2PQ14568 343 aaPredicted RBP12.63□□□□□ -0.39
EPB41L3-214ENST00000578618 RSPH6AQ9H0K4 717 aa12.62□□□□□ -0.39
EPB41L3-214ENST00000578618 DDRGK1Q96HY6 314 aa12.6□□□□□ -0.39
EPB41L3-214ENST00000578618 FAM9BQ8IZU0 186 aa12.56□□□□□ -0.4
EPB41L3-214ENST00000578618 PNNQ9H307 717 aaKnown RBP12.56□□□□□ -0.4
EPB41L3-214ENST00000578618 CCDC180Q9P1Z9 1646 aa12.56□□□□□ -0.4
EPB41L3-214ENST00000578618 UBE2Q2Q8WVN8 375 aa12.54□□□□□ -0.4
EPB41L3-214ENST00000578618 MYO15BQ96JP2 1530 aa12.54□□□□□ -0.4
EPB41L3-214ENST00000578618 UPF2Q9HAU5 1272 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms