RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 ASB16-AS1Q495Z4 193 aa9.85□□□□□ -0.83
SREBF1-218ENST00000578469 PRR15Q8IV56 129 aa9.85□□□□□ -0.83
SREBF1-218ENST00000578469 LIMD2Q9BT23 127 aa9.85□□□□□ -0.83
SREBF1-218ENST00000578469 PKHD1L1Q86WI1 4243 aa9.85□□□□□ -0.83
SREBF1-218ENST00000578469 HCG22E2RYF7 251 aa9.83□□□□□ -0.84
SREBF1-218ENST00000578469 Q5XG85 94 aa9.83□□□□□ -0.84
SREBF1-218ENST00000578469 SERP2Q8N6R1 65 aa9.83□□□□□ -0.84
SREBF1-218ENST00000578469 PRR26Q8N8Z3 221 aa9.83□□□□□ -0.84
SREBF1-218ENST00000578469 COX7CP15954 63 aa9.81□□□□□ -0.84
SREBF1-218ENST00000578469 SPAG11AQ6PDA7 123 aa9.81□□□□□ -0.84
SREBF1-218ENST00000578469 TRAV7A0A075B6U4 112 aa9.8□□□□□ -0.84
SREBF1-218ENST00000578469 SPINK1P00995 79 aa9.8□□□□□ -0.84
SREBF1-218ENST00000578469 UQCRQO14949 82 aa9.79□□□□□ -0.84
SREBF1-218ENST00000578469 LINC00304Q8N9R0 145 aa9.78□□□□□ -0.84
SREBF1-218ENST00000578469 A0A1B0GVX0 72 aa9.76□□□□□ -0.85
SREBF1-218ENST00000578469 CCDC179H3BU77 68 aa9.75□□□□□ -0.85
SREBF1-218ENST00000578469 RPS29P62273 56 aaKnown RBP9.75□□□□□ -0.85
SREBF1-218ENST00000578469 CASC2Q6XLA1 102 aa9.75□□□□□ -0.85
SREBF1-218ENST00000578469 WFDC13Q8IUB5 93 aa9.75□□□□□ -0.85
SREBF1-218ENST00000578469 IGHV6-1A0A0B4J1U7 121 aa9.72□□□□□ -0.85
SREBF1-218ENST00000578469 C1orf195Q5TG92 126 aa9.72□□□□□ -0.85
SREBF1-218ENST00000578469 C8orf17Q9NRJ1 99 aa9.72□□□□□ -0.85
SREBF1-218ENST00000578469 MMP24-AS1A0A0U1RRL7 71 aa9.71□□□□□ -0.86
SREBF1-218ENST00000578469 MT1HL1P0DM35 61 aa9.7□□□□□ -0.86
SREBF1-218ENST00000578469 OCR1Q9BZK8 76 aa9.7□□□□□ -0.86
SREBF1-218ENST00000578469 hDV103S1A0JD37 113 aa9.69□□□□□ -0.86
SREBF1-218ENST00000578469 RNF213Q63HN8 5207 aa9.69□□□□□ -0.86
SREBF1-218ENST00000578469 LRP2P98164 4655 aa9.68□□□□□ -0.86
SREBF1-218ENST00000578469 C8orf87E5RJ46 101 aa9.67□□□□□ -0.86
SREBF1-218ENST00000578469 TNXBP22105 4242 aa9.65□□□□□ -0.86
SREBF1-218ENST00000578469 TMEM254Q8TBM7 123 aa9.63□□□□□ -0.87
SREBF1-218ENST00000578469 C20orf197Q8N268 126 aa9.62□□□□□ -0.87
SREBF1-218ENST00000578469 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
SREBF1-218ENST00000578469 MRPL34Q9BQ48 92 aaKnown RBP9.61□□□□□ -0.87
SREBF1-218ENST00000578469 LINC00313P59037 77 aa9.59□□□□□ -0.87
SREBF1-218ENST00000578469 KRTAP10-8P60410 259 aa9.59□□□□□ -0.87
SREBF1-218ENST00000578469 C5orf47Q569G3 176 aa9.59□□□□□ -0.87
SREBF1-218ENST00000578469 TP53AIP1Q9HCN2 124 aa9.58□□□□□ -0.88
SREBF1-218ENST00000578469 NOTCH2NLQ7Z3S9 236 aa9.57□□□□□ -0.88
SREBF1-218ENST00000578469 NDUFS5O43920 106 aa9.55□□□□□ -0.88
SREBF1-218ENST00000578469 KLKP1Q107X0 134 aa9.55□□□□□ -0.88
SREBF1-218ENST00000578469 MP68P56378 58 aa9.54□□□□□ -0.88
SREBF1-218ENST00000578469 SNURFQ9Y675 71 aa9.52□□□□□ -0.89
SREBF1-218ENST00000578469 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
SREBF1-218ENST00000578469 NDUFC1O43677 76 aa9.51□□□□□ -0.89
SREBF1-218ENST00000578469 H0Y9P7 68 aa9.49□□□□□ -0.89
SREBF1-218ENST00000578469 H3BPC8 53 aa9.48□□□□□ -0.89
SREBF1-218ENST00000578469 TRAV22A0A0B4J277 110 aa9.47□□□□□ -0.89
SREBF1-218ENST00000578469 CYSTM1Q9H1C7 97 aa9.46□□□□□ -0.9
SREBF1-218ENST00000578469 Q8N9P0 234 aaPredicted RBP9.44□□□□□ -0.9
SREBF1-218ENST00000578469 KRTAP16-1A8MUX0 517 aa9.43□□□□□ -0.9
SREBF1-218ENST00000578469 TMEM258P61165 79 aa9.43□□□□□ -0.9
SREBF1-218ENST00000578469 LINC00208Q96KT6 92 aa9.43□□□□□ -0.9
SREBF1-218ENST00000578469 ZCCHC13Q8WW36 166 aaKnown RBP9.41□□□□□ -0.9
SREBF1-218ENST00000578469 RETNLBQ9BQ08 111 aa9.41□□□□□ -0.9
SREBF1-218ENST00000578469 H7BZZ5 65 aa9.4□□□□□ -0.9
SREBF1-218ENST00000578469 C1orf64Q8NEQ6 169 aa9.39□□□□□ -0.91
SREBF1-218ENST00000578469 FP248Q71RG6 208 aaPredicted RBP9.38□□□□□ -0.91
SREBF1-218ENST00000578469 FAM236DA0A1B0GTK5 79 aa9.33□□□□□ -0.92
SREBF1-218ENST00000578469 C9orf92A6NGG3 77 aa9.33□□□□□ -0.92
SREBF1-218ENST00000578469 FAM236CP0DP71 79 aa9.33□□□□□ -0.92
SREBF1-218ENST00000578469 Q5W150 140 aa9.32□□□□□ -0.92
SREBF1-218ENST00000578469 LOC101927531A0A1B0GV80 90 aa9.31□□□□□ -0.92
SREBF1-218ENST00000578469 ATP5EP56381 51 aaPredicted RBP9.31□□□□□ -0.92
SREBF1-218ENST00000578469 KRTAP13-3Q3SY46 172 aa9.29□□□□□ -0.92
SREBF1-218ENST00000578469 LPAP08519 4548 aa9.28□□□□□ -0.92
SREBF1-218ENST00000578469 IGLV7-46A0A075B6I9 117 aa9.27□□□□□ -0.93
SREBF1-218ENST00000578469 C20orf166-AS1Q96NR2 134 aa9.27□□□□□ -0.93
SREBF1-218ENST00000578469 A8MUU9 505 aa9.26□□□□□ -0.93
SREBF1-218ENST00000578469 PCOTHQ58A44 107 aa9.21□□□□□ -0.94
SREBF1-218ENST00000578469 SPANXA2-OT1Q8N9U9 137 aa9.21□□□□□ -0.94
SREBF1-218ENST00000578469 IGKV2-30P06310 120 aa9.2□□□□□ -0.94
SREBF1-218ENST00000578469 CYP4F30PQ9H0H9 118 aa9.2□□□□□ -0.94
SREBF1-218ENST00000578469 PRR4Q16378 134 aa9.19□□□□□ -0.94
SREBF1-218ENST00000578469 Q75L30 129 aa9.19□□□□□ -0.94
SREBF1-218ENST00000578469 MUC2Q02817 5179 aa9.16□□□□□ -0.94
SREBF1-218ENST00000578469 RPS28P62857 69 aaKnown RBP9.16□□□□□ -0.94
SREBF1-218ENST00000578469 KRTAP9-2Q9BYQ4 174 aa9.16□□□□□ -0.94
SREBF1-218ENST00000578469 SERP1Q9Y6X1 66 aa9.15□□□□□ -0.94
SREBF1-218ENST00000578469 IGKV2D-30A0A075B6S6 120 aa9.13□□□□□ -0.95
SREBF1-218ENST00000578469 C7orf65Q6ZTY9 151 aa9.11□□□□□ -0.95
SREBF1-218ENST00000578469 ATP11AUNQ6ZP68 121 aa9.09□□□□□ -0.95
SREBF1-218ENST00000578469 RPL37P61927 97 aaKnown RBP9.08□□□□□ -0.96
SREBF1-218ENST00000578469 XP32Q5T750 250 aa9.08□□□□□ -0.96
SREBF1-218ENST00000578469 TPRXLQ17RH7 258 aa9.07□□□□□ -0.96
SREBF1-218ENST00000578469 HRES1P13985 223 aa9.06□□□□□ -0.96
SREBF1-218ENST00000578469 FAT4Q6V0I7 4981 aa9.03□□□□□ -0.96
SREBF1-218ENST00000578469 KRTAP3-3Q9BYR6 98 aa9.03□□□□□ -0.96
SREBF1-218ENST00000578469 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
SREBF1-218ENST00000578469 KRTAP9-6A0A140TA67 174 aa9□□□□□ -0.97
SREBF1-218ENST00000578469 SPINK7P58062 85 aa8.98□□□□□ -0.97
SREBF1-218ENST00000578469 LCE2AQ5TA79 106 aaPredicted RBP8.95□□□□□ -0.98
SREBF1-218ENST00000578469 ACYP2P14621 99 aa8.94□□□□□ -0.98
SREBF1-218ENST00000578469 DMAC1Q96GE9 116 aa8.94□□□□□ -0.98
SREBF1-218ENST00000578469 SMIM26A0A096LP01 95 aa8.93□□□□□ -0.98
SREBF1-218ENST00000578469 COA5Q86WW8 74 aa8.92□□□□□ -0.98
SREBF1-218ENST00000578469 A8MUN3 132 aa8.87□□□□□ -0.99
SREBF1-218ENST00000578469 C4orf26Q17RF5 130 aa8.86□□□□□ -0.99
SREBF1-218ENST00000578469 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
SREBF1-218ENST00000578469 SEC61BP60468 96 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms