RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ALMS1Q8TCU4 4167 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 PAPPA2Q9BXP8 1791 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 USP9YO00507 2555 aaPredicted RBP0.32□□□□□ -2.36
COPS3-213ENST00000577210 TEX15Q9BXT5 2789 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 PLXNB2O15031 1838 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 BPTFQ12830 3046 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 DEFB130BP0DP73 79 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 DEFB130AP0DP74 79 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 HTN1P15515 57 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 SPRR1BP22528 89 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 H1FX-AS1Q4G0G2 97 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 LELP1Q5T871 98 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 COX6B2Q6YFQ2 88 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 NOP10Q9NPE3 64 aaKnown RBP0.32□□□□□ -2.36
COPS3-213ENST00000577210 WDR87Q6ZQQ6 2873 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 HIVEP1P15822 2718 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 CACNA1AO00555 2505 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 MTORP42345 2549 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 ABCA12Q86UK0 2595 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 USP9XQ93008 2570 aaPredicted RBP0.32□□□□□ -2.36
COPS3-213ENST00000577210 RGPD3A6NKT7 1758 aaPredicted RBP0.32□□□□□ -2.36
COPS3-213ENST00000577210 RGPD4Q7Z3J3 1758 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 ARFGEF2Q9Y6D5 1785 aa0.32□□□□□ -2.36
COPS3-213ENST00000577210 MUC5ACP98088 5654 aa0.31□□□□□ -2.36
COPS3-213ENST00000577210 CENPEQ02224 2701 aa0.31□□□□□ -2.36
COPS3-213ENST00000577210 ASH1LQ9NR48 2969 aaKnown RBP0.31□□□□□ -2.36
COPS3-213ENST00000577210 UTP20O75691 2785 aaKnown RBP0.31□□□□□ -2.36
COPS3-213ENST00000577210 SRRM2Q9UQ35 2752 aaKnown RBP0.31□□□□□ -2.36
COPS3-213ENST00000577210 MYO18BQ8IUG5 2567 aa0.31□□□□□ -2.36
COPS3-213ENST00000577210 CHD8Q9HCK8 2581 aa0.31□□□□□ -2.36
COPS3-213ENST00000577210 MGAQ8IWI9 3026 aa0.31□□□□□ -2.36
COPS3-213ENST00000577210 ATRQ13535 2644 aa0.31□□□□□ -2.36
COPS3-213ENST00000577210 H3BUX3 64 aa0.31□□□□□ -2.36
COPS3-213ENST00000577210 DOPEY1Q5JWR5 2465 aa0.31□□□□□ -2.36
COPS3-213ENST00000577210 COL14A1Q05707 1796 aaKnown RBP0.31□□□□□ -2.36
COPS3-213ENST00000577210 NBEAL2Q6ZNJ1 2754 aa0.31□□□□□ -2.36
COPS3-213ENST00000577210 MAST4O15021 2626 aa0.31□□□□□ -2.36
COPS3-213ENST00000577210 PRRC2CQ9Y520 2896 aaKnown RBP0.31□□□□□ -2.36
COPS3-213ENST00000577210 FREM2Q5SZK8 3169 aa0.31□□□□□ -2.36
COPS3-213ENST00000577210 CFAP46Q8IYW2 2715 aa0.3□□□□□ -2.36
COPS3-213ENST00000577210 FRYLO94915 3013 aa0.3□□□□□ -2.36
COPS3-213ENST00000577210 UBR5O95071 2799 aaPredicted RBP0.3□□□□□ -2.36
COPS3-213ENST00000577210 FASNP49327 2511 aaKnown RBP0.3□□□□□ -2.36
COPS3-213ENST00000577210 CHD9Q3L8U1 2897 aa0.3□□□□□ -2.36
COPS3-213ENST00000577210 CEP295Q9C0D2 2601 aa0.3□□□□□ -2.36
COPS3-213ENST00000577210 TRANK1O15050 2925 aa0.3□□□□□ -2.36
COPS3-213ENST00000577210 TNRC18O15417 2968 aaPredicted RBP0.3□□□□□ -2.36
COPS3-213ENST00000577210 DEFB136Q30KP8 78 aa0.3□□□□□ -2.36
COPS3-213ENST00000577210 DEFB123Q8N688 67 aa0.3□□□□□ -2.36
COPS3-213ENST00000577210 DNAH11Q96DT5 4516 aa0.3□□□□□ -2.36
COPS3-213ENST00000577210 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
COPS3-213ENST00000577210 REV3LO60673 3130 aa0.3□□□□□ -2.36
COPS3-213ENST00000577210 TNRC6CQ9HCJ0 1690 aaKnown RBP0.3□□□□□ -2.36
COPS3-213ENST00000577210 SRCAPQ6ZRS2 3230 aa0.3□□□□□ -2.36
COPS3-213ENST00000577210 A0A0G2JMZ2 1700 aa0.3□□□□□ -2.36
COPS3-213ENST00000577210 ANKRD11Q6UB99 2663 aaPredicted RBP0.3□□□□□ -2.36
COPS3-213ENST00000577210 GCN1Q92616 2671 aaKnown RBP0.3□□□□□ -2.36
COPS3-213ENST00000577210 ITPR2Q14571 2701 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 FSIP2Q5CZC0 6907 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 APCP25054 2843 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 MAP1AP78559 2803 aaPredicted RBP0.29□□□□□ -2.36
COPS3-213ENST00000577210 STAB1Q9NY15 2570 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 TACC2O95359 2948 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 OTOGQ6ZRI0 2925 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 UNC79Q9P2D8 2635 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 FRYQ5TBA9 3013 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 ITPR3Q14573 2671 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 MACF1Q9UPN3 7388 aaKnown RBP0.29□□□□□ -2.36
COPS3-213ENST00000577210 DNAH12Q6ZR08 3092 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 ZNF292O60281 2723 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 A0A096LNI7 61 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 A0A096LPF7 62 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 PRLHP81277 87 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 S4R3F8 94 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 AKAP13Q12802 2813 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 MXRA5Q9NR99 2828 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 ACACBO00763 2458 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 LRBAP50851 2863 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 FLNBO75369 2602 aaKnown RBP0.29□□□□□ -2.36
COPS3-213ENST00000577210 ATMQ13315 3056 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 SETXQ7Z333 2677 aaKnown RBP0.29□□□□□ -2.36
COPS3-213ENST00000577210 NSD1Q96L73 2696 aaPredicted RBP0.29□□□□□ -2.36
COPS3-213ENST00000577210 CHD6Q8TD26 2715 aa0.29□□□□□ -2.36
COPS3-213ENST00000577210 NIPBLQ6KC79 2804 aaeCLIP0.28□□□□□ -2.36
COPS3-213ENST00000577210 CRYBG3Q68DQ2 2970 aa0.28□□□□□ -2.36
COPS3-213ENST00000577210 PRUNE2Q8WUY3 3088 aa0.28□□□□□ -2.36
COPS3-213ENST00000577210 COL6A5A8TX70 2615 aa0.28□□□□□ -2.36
COPS3-213ENST00000577210 EP400Q96L91 3159 aa0.28□□□□□ -2.36
COPS3-213ENST00000577210 H3BNG1 76 aa0.28□□□□□ -2.36
COPS3-213ENST00000577210 LINC01556Q5JQF7 62 aa0.28□□□□□ -2.36
COPS3-213ENST00000577210 APLNQ9ULZ1 77 aa0.28□□□□□ -2.36
COPS3-213ENST00000577210 DCHS2Q6V1P9 2916 aa0.28□□□□□ -2.36
COPS3-213ENST00000577210 CHD7Q9P2D1 2997 aa0.28□□□□□ -2.36
COPS3-213ENST00000577210 WDFY3Q8IZQ1 3526 aa0.28□□□□□ -2.36
COPS3-213ENST00000577210 CFAP54Q96N23 3096 aa0.28□□□□□ -2.36
COPS3-213ENST00000577210 CFAP47Q6ZTR5 3102 aa0.28□□□□□ -2.37
COPS3-213ENST00000577210 STAB2Q8WWQ8 2551 aa0.28□□□□□ -2.37
COPS3-213ENST00000577210 KMT2DO14686 5537 aa0.28□□□□□ -2.37
COPS3-213ENST00000577210 NBEAL1Q6ZS30 2694 aa0.28□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms