RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FAM236AA0A1B0GUQ0 79 aa4.46□□□□□ -1.7
CCDC40-215ENST00000576033 FAM236BA0A1B0GV22 79 aa4.46□□□□□ -1.7
CCDC40-215ENST00000576033 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.7
CCDC40-215ENST00000576033 NREPQ16612 68 aa4.46□□□□□ -1.7
CCDC40-215ENST00000576033 SSBP3-AS1Q7Z2R9 100 aa4.46□□□□□ -1.7
CCDC40-215ENST00000576033 KRTAP9-2Q9BYQ4 174 aa4.46□□□□□ -1.7
CCDC40-215ENST00000576033 A0A087WVE0 104 aa4.45□□□□□ -1.7
CCDC40-215ENST00000576033 A0A087WSZ3 146 aa4.44□□□□□ -1.7
CCDC40-215ENST00000576033 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
CCDC40-215ENST00000576033 IGKV4-1P06312 121 aa4.44□□□□□ -1.7
CCDC40-215ENST00000576033 DSCR10P59022 87 aa4.44□□□□□ -1.7
CCDC40-215ENST00000576033 SPAG11AQ6PDA7 123 aa4.44□□□□□ -1.7
CCDC40-215ENST00000576033 LINC00472Q9H8W2 130 aa4.44□□□□□ -1.7
CCDC40-215ENST00000576033 BPY2O14599 106 aa4.43□□□□□ -1.7
CCDC40-215ENST00000576033 SPINK1P00995 79 aa4.43□□□□□ -1.7
CCDC40-215ENST00000576033 RNF213Q63HN8 5207 aa4.43□□□□□ -1.7
CCDC40-215ENST00000576033 IGLV7-46A0A075B6I9 117 aa4.42□□□□□ -1.7
CCDC40-215ENST00000576033 ATOX1O00244 68 aa4.42□□□□□ -1.7
CCDC40-215ENST00000576033 CD164Q04900 197 aa4.42□□□□□ -1.7
CCDC40-215ENST00000576033 ANAPC13Q9BS18 74 aa4.42□□□□□ -1.7
CCDC40-215ENST00000576033 MUC2Q02817 5179 aa4.42□□□□□ -1.7
CCDC40-215ENST00000576033 Q96NJ1 140 aa4.41□□□□□ -1.7
CCDC40-215ENST00000576033 Q8N9L7 120 aa4.4□□□□□ -1.71
CCDC40-215ENST00000576033 RPS29P62273 56 aaKnown RBP4.39□□□□□ -1.71
CCDC40-215ENST00000576033 KRTAP13-3Q3SY46 172 aa4.39□□□□□ -1.71
CCDC40-215ENST00000576033 ASB16-AS1Q495Z4 193 aa4.39□□□□□ -1.71
CCDC40-215ENST00000576033 Q5XG85 94 aa4.39□□□□□ -1.71
CCDC40-215ENST00000576033 SS18L2Q9UHA2 77 aa4.39□□□□□ -1.71
CCDC40-215ENST00000576033 J3KT08 172 aa4.38□□□□□ -1.71
CCDC40-215ENST00000576033 K7EQZ3 153 aa4.38□□□□□ -1.71
CCDC40-215ENST00000576033 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
CCDC40-215ENST00000576033 C1orf195Q5TG92 126 aa4.38□□□□□ -1.71
CCDC40-215ENST00000576033 C9orf92A6NGG3 77 aa4.37□□□□□ -1.71
CCDC40-215ENST00000576033 A8MWP4 228 aa4.37□□□□□ -1.71
CCDC40-215ENST00000576033 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
CCDC40-215ENST00000576033 LIMD2Q9BT23 127 aa4.37□□□□□ -1.71
CCDC40-215ENST00000576033 UQCRQO14949 82 aa4.36□□□□□ -1.71
CCDC40-215ENST00000576033 COX7CP15954 63 aa4.36□□□□□ -1.71
CCDC40-215ENST00000576033 FP248Q71RG6 208 aaPredicted RBP4.36□□□□□ -1.71
CCDC40-215ENST00000576033 PRR15Q8IV56 129 aa4.36□□□□□ -1.71
CCDC40-215ENST00000576033 SMIM20Q8N5G0 67 aa4.36□□□□□ -1.71
CCDC40-215ENST00000576033 SERP2Q8N6R1 65 aa4.36□□□□□ -1.71
CCDC40-215ENST00000576033 CCDC179H3BU77 68 aa4.35□□□□□ -1.71
CCDC40-215ENST00000576033 OCR1Q9BZK8 76 aa4.35□□□□□ -1.71
CCDC40-215ENST00000576033 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.71
CCDC40-215ENST00000576033 DEFB116Q30KQ4 102 aa4.34□□□□□ -1.71
CCDC40-215ENST00000576033 HCG22E2RYF7 251 aa4.33□□□□□ -1.72
CCDC40-215ENST00000576033 KRTAP4-1Q9BYQ7 146 aa4.33□□□□□ -1.72
CCDC40-215ENST00000576033 MMP24-AS1A0A0U1RRL7 71 aa4.32□□□□□ -1.72
CCDC40-215ENST00000576033 A0A1B0GVX0 72 aa4.31□□□□□ -1.72
CCDC40-215ENST00000576033 NDUFB1O75438 58 aa4.3□□□□□ -1.72
CCDC40-215ENST00000576033 C8orf17Q9NRJ1 99 aa4.29□□□□□ -1.72
CCDC40-215ENST00000576033 KLKP1Q107X0 134 aa4.28□□□□□ -1.72
CCDC40-215ENST00000576033 CASC2Q6XLA1 102 aa4.28□□□□□ -1.72
CCDC40-215ENST00000576033 WFDC13Q8IUB5 93 aa4.27□□□□□ -1.73
CCDC40-215ENST00000576033 CYSTM1Q9H1C7 97 aa4.27□□□□□ -1.73
CCDC40-215ENST00000576033 hDV103S1A0JD37 113 aa4.26□□□□□ -1.73
CCDC40-215ENST00000576033 C8orf87E5RJ46 101 aa4.26□□□□□ -1.73
CCDC40-215ENST00000576033 NOTCH2NLQ7Z3S9 236 aa4.26□□□□□ -1.73
CCDC40-215ENST00000576033 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
CCDC40-215ENST00000576033 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
CCDC40-215ENST00000576033 A0A0U1RQV1 116 aa4.25□□□□□ -1.73
CCDC40-215ENST00000576033 PCOTHQ58A44 107 aa4.25□□□□□ -1.73
CCDC40-215ENST00000576033 TMEM254Q8TBM7 123 aa4.25□□□□□ -1.73
CCDC40-215ENST00000576033 IGHV6-1A0A0B4J1U7 121 aa4.24□□□□□ -1.73
CCDC40-215ENST00000576033 KRTAP4-8A0A0G2JLE6 195 aa4.24□□□□□ -1.73
CCDC40-215ENST00000576033 C20orf197Q8N268 126 aa4.24□□□□□ -1.73
CCDC40-215ENST00000576033 ZCCHC13Q8WW36 166 aaKnown RBP4.24□□□□□ -1.73
CCDC40-215ENST00000576033 KRTAP16-1A8MUX0 517 aa4.23□□□□□ -1.73
CCDC40-215ENST00000576033 C5orf47Q569G3 176 aa4.23□□□□□ -1.73
CCDC40-215ENST00000576033 MRPL34Q9BQ48 92 aaKnown RBP4.23□□□□□ -1.73
CCDC40-215ENST00000576033 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
CCDC40-215ENST00000576033 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
CCDC40-215ENST00000576033 H7BZZ5 65 aa4.22□□□□□ -1.73
CCDC40-215ENST00000576033 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
CCDC40-215ENST00000576033 Q8N9P0 234 aaPredicted RBP4.21□□□□□ -1.74
CCDC40-215ENST00000576033 TP53AIP1Q9HCN2 124 aa4.21□□□□□ -1.74
CCDC40-215ENST00000576033 H3BPC8 53 aa4.2□□□□□ -1.74
CCDC40-215ENST00000576033 NDUFC1O43677 76 aa4.2□□□□□ -1.74
CCDC40-215ENST00000576033 SEC61BP60468 96 aaKnown RBP4.2□□□□□ -1.74
CCDC40-215ENST00000576033 TMEM258P61165 79 aa4.2□□□□□ -1.74
CCDC40-215ENST00000576033 LINC00313P59037 77 aa4.19□□□□□ -1.74
CCDC40-215ENST00000576033 SNURFQ9Y675 71 aa4.19□□□□□ -1.74
CCDC40-215ENST00000576033 TRAV22A0A0B4J277 110 aa4.17□□□□□ -1.74
CCDC40-215ENST00000576033 H0Y9P7 68 aa4.17□□□□□ -1.74
CCDC40-215ENST00000576033 KRTAP19-2Q3LHN2 52 aa4.17□□□□□ -1.74
CCDC40-215ENST00000576033 MP68P56378 58 aa4.16□□□□□ -1.74
CCDC40-215ENST00000576033 C20orf166-AS1Q96NR2 134 aa4.16□□□□□ -1.74
CCDC40-215ENST00000576033 FLGP20930 4061 aaPredicted RBP4.16□□□□□ -1.74
CCDC40-215ENST00000576033 A8MUU9 505 aa4.15□□□□□ -1.75
CCDC40-215ENST00000576033 Q5W150 140 aa4.15□□□□□ -1.75
CCDC40-215ENST00000576033 Q75L30 129 aa4.15□□□□□ -1.75
CCDC40-215ENST00000576033 LINC00208Q96KT6 92 aa4.14□□□□□ -1.75
CCDC40-215ENST00000576033 FAM236DA0A1B0GTK5 79 aa4.13□□□□□ -1.75
CCDC40-215ENST00000576033 FAM236CP0DP71 79 aa4.13□□□□□ -1.75
CCDC40-215ENST00000576033 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
CCDC40-215ENST00000576033 NDUFS5O43920 106 aa4.12□□□□□ -1.75
CCDC40-215ENST00000576033 C1orf64Q8NEQ6 169 aa4.12□□□□□ -1.75
CCDC40-215ENST00000576033 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
CCDC40-215ENST00000576033 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms