RNA–Protein interactions for RNA: ENST00000575542.5

RPTOR-209, Transcript of regulatory associated protein of MTOR complex 1, humanhuman

TSL 1 (best)

Gene RPTOR, Length 5,536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPTOR-209ENST00000575542 USP34Q70CQ2 3546 aa8.84□□□□□ -0.99
RPTOR-209ENST00000575542 SPEGQ15772 3267 aa8.83□□□□□ -1
RPTOR-209ENST00000575542 KRTAP13-2Q52LG2 175 aa8.81□□□□□ -1
RPTOR-209ENST00000575542 PRAC1Q96KF2 57 aa8.8□□□□□ -1
RPTOR-209ENST00000575542 ROMO1P60602 79 aa8.79□□□□□ -1
RPTOR-209ENST00000575542 M0QZ58 72 aa8.76□□□□□ -1.01
RPTOR-209ENST00000575542 SPATA8Q6RVD6 105 aa8.73□□□□□ -1.01
RPTOR-209ENST00000575542 CFAP47Q6ZTR5 3102 aa8.72□□□□□ -1.01
RPTOR-209ENST00000575542 ADM2Q7Z4H4 148 aa8.72□□□□□ -1.01
RPTOR-209ENST00000575542 TENM4Q6N022 2769 aa8.72□□□□□ -1.01
RPTOR-209ENST00000575542 ZANQ9Y493 2812 aa8.71□□□□□ -1.01
RPTOR-209ENST00000575542 STAB2Q8WWQ8 2551 aa8.7□□□□□ -1.02
RPTOR-209ENST00000575542 LOC400499M0QZD8 3231 aa8.7□□□□□ -1.02
RPTOR-209ENST00000575542 H3BS24 57 aa8.7□□□□□ -1.02
RPTOR-209ENST00000575542 CRYBG3Q68DQ2 2970 aa8.67□□□□□ -1.02
RPTOR-209ENST00000575542 NIPBLQ6KC79 2804 aaeCLIP8.65□□□□□ -1.03
RPTOR-209ENST00000575542 DMBT1Q9UGM3 2413 aaPredicted RBP8.63□□□□□ -1.03
RPTOR-209ENST00000575542 CELSR2Q9HCU4 2923 aa8.62□□□□□ -1.03
RPTOR-209ENST00000575542 HRNRQ86YZ3 2850 aaPredicted RBP8.6□□□□□ -1.03
RPTOR-209ENST00000575542 ASH1LQ9NR48 2969 aaKnown RBP8.59□□□□□ -1.03
RPTOR-209ENST00000575542 A8MUU9 505 aa8.58□□□□□ -1.04
RPTOR-209ENST00000575542 PLAC4Q8WY50 150 aa8.57□□□□□ -1.04
RPTOR-209ENST00000575542 MYO15AQ9UKN7 3530 aa8.56□□□□□ -1.04
RPTOR-209ENST00000575542 C20orf166-AS1Q96NR2 134 aa8.56□□□□□ -1.04
RPTOR-209ENST00000575542 DCHS2Q6V1P9 2916 aa8.54□□□□□ -1.04
RPTOR-209ENST00000575542 FLG2Q5D862 2391 aaPredicted RBP8.51□□□□□ -1.05
RPTOR-209ENST00000575542 A6NN06 94 aa8.5□□□□□ -1.05
RPTOR-209ENST00000575542 KRTAP1-4P0C5Y4 121 aa8.47□□□□□ -1.05
RPTOR-209ENST00000575542 NF1P21359 2839 aa8.45□□□□□ -1.06
RPTOR-209ENST00000575542 A0A0A0MQY5 61 aa8.44□□□□□ -1.06
RPTOR-209ENST00000575542 FBN2P35556 2912 aa8.42□□□□□ -1.06
RPTOR-209ENST00000575542 A8MU10 97 aa8.42□□□□□ -1.06
RPTOR-209ENST00000575542 KRTAP25-1Q3LHN0 102 aa8.39□□□□□ -1.07
RPTOR-209ENST00000575542 RELNP78509 3460 aa8.37□□□□□ -1.07
RPTOR-209ENST00000575542 XP32Q5T750 250 aa8.3□□□□□ -1.08
RPTOR-209ENST00000575542 DCHS1Q96JQ0 3298 aa8.3□□□□□ -1.08
RPTOR-209ENST00000575542 MXRA5Q9NR99 2828 aa8.29□□□□□ -1.08
RPTOR-209ENST00000575542 MUC3AQ02505 3323 aa8.29□□□□□ -1.08
RPTOR-209ENST00000575542 LAMA5O15230 3695 aa8.26□□□□□ -1.09
RPTOR-209ENST00000575542 KRTAP16-1A8MUX0 517 aa8.25□□□□□ -1.09
RPTOR-209ENST00000575542 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
RPTOR-209ENST00000575542 DMDP11532 3685 aa8.17□□□□□ -1.1
RPTOR-209ENST00000575542 WDFY3Q8IZQ1 3526 aa8.17□□□□□ -1.1
RPTOR-209ENST00000575542 PDZD2O15018 2839 aa8.16□□□□□ -1.1
RPTOR-209ENST00000575542 TNP1P09430 55 aa8.16□□□□□ -1.1
RPTOR-209ENST00000575542 ASPMQ8IZT6 3477 aa8.14□□□□□ -1.11
RPTOR-209ENST00000575542 CELSR1Q9NYQ6 3014 aa8.11□□□□□ -1.11
RPTOR-209ENST00000575542 KRTAP13-3Q3SY46 172 aa8.08□□□□□ -1.12
RPTOR-209ENST00000575542 TENM1Q9UKZ4 2725 aa8.08□□□□□ -1.12
RPTOR-209ENST00000575542 TENM2Q9NT68 2774 aa8.07□□□□□ -1.12
RPTOR-209ENST00000575542 A0A1B0GVY2 172 aa8.06□□□□□ -1.12
RPTOR-209ENST00000575542 TENM3Q9P273 2699 aa8.04□□□□□ -1.12
RPTOR-209ENST00000575542 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
RPTOR-209ENST00000575542 OTOGQ6ZRI0 2925 aa8.03□□□□□ -1.12
RPTOR-209ENST00000575542 ZFHX4Q86UP3 3567 aa8.03□□□□□ -1.12
RPTOR-209ENST00000575542 H0YAA0 97 aa8.02□□□□□ -1.13
RPTOR-209ENST00000575542 KRTAP10-8P60410 259 aa8□□□□□ -1.13
RPTOR-209ENST00000575542 NBPF19A0A087WUL8 3843 aa7.99□□□□□ -1.13
RPTOR-209ENST00000575542 PKD1L1Q8TDX9 2849 aa7.97□□□□□ -1.13
RPTOR-209ENST00000575542 FBN1P35555 2871 aaKnown RBP7.88□□□□□ -1.15
RPTOR-209ENST00000575542 ZFHX3Q15911 3703 aa7.88□□□□□ -1.15
RPTOR-209ENST00000575542 NDUFAF8A1L188 74 aa7.87□□□□□ -1.15
RPTOR-209ENST00000575542 SMG1Q96Q15 3661 aaKnown RBP7.87□□□□□ -1.15
RPTOR-209ENST00000575542 P0C880 135 aa7.82□□□□□ -1.16
RPTOR-209ENST00000575542 C10orf95Q9H7T3 257 aa7.81□□□□□ -1.16
RPTOR-209ENST00000575542 TGP01266 2768 aa7.79□□□□□ -1.16
RPTOR-209ENST00000575542 VWFP04275 2813 aa7.78□□□□□ -1.16
RPTOR-209ENST00000575542 KRTAP10-10P60014 251 aa7.76□□□□□ -1.17
RPTOR-209ENST00000575542 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.17
RPTOR-209ENST00000575542 CSMD1Q96PZ7 3565 aa7.7□□□□□ -1.18
RPTOR-209ENST00000575542 CSMD2Q7Z408 3487 aa7.68□□□□□ -1.18
RPTOR-209ENST00000575542 ANK3Q12955 4377 aaKnown RBP7.67□□□□□ -1.18
RPTOR-209ENST00000575542 SPENQ96T58 3664 aaKnown RBP7.63□□□□□ -1.19
RPTOR-209ENST00000575542 SVEP1Q4LDE5 3571 aa7.6□□□□□ -1.19
RPTOR-209ENST00000575542 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
RPTOR-209ENST00000575542 KRTAP12-2P59991 146 aa7.52□□□□□ -1.21
RPTOR-209ENST00000575542 BSNQ9UPA5 3926 aa7.52□□□□□ -1.21
RPTOR-209ENST00000575542 TRRAPQ9Y4A5 3859 aa7.47□□□□□ -1.21
RPTOR-209ENST00000575542 KRTAP13-4Q3LI77 160 aa7.46□□□□□ -1.22
RPTOR-209ENST00000575542 KRTAP12-1P59990 96 aa7.46□□□□□ -1.22
RPTOR-209ENST00000575542 SRRM2Q9UQ35 2752 aaKnown RBP7.41□□□□□ -1.22
RPTOR-209ENST00000575542 CUBNO60494 3623 aa7.37□□□□□ -1.23
RPTOR-209ENST00000575542 FBN3Q75N90 2809 aa7.37□□□□□ -1.23
RPTOR-209ENST00000575542 KRTAP10-6P60371 365 aaPredicted RBP7.32□□□□□ -1.24
RPTOR-209ENST00000575542 MT1HL1P0DM35 61 aa7.32□□□□□ -1.24
RPTOR-209ENST00000575542 KRTAP10-4P60372 401 aaPredicted RBP7.24□□□□□ -1.25
RPTOR-209ENST00000575542 MEGF8Q7Z7M0 2845 aa7.24□□□□□ -1.25
RPTOR-209ENST00000575542 COL7A1Q02388 2944 aa7.17□□□□□ -1.26
RPTOR-209ENST00000575542 HUWE1Q7Z6Z7 4374 aaKnown RBP7.16□□□□□ -1.26
RPTOR-209ENST00000575542 KRTAP3-3Q9BYR6 98 aa7.11□□□□□ -1.27
RPTOR-209ENST00000575542 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
RPTOR-209ENST00000575542 ALMS1Q8TCU4 4167 aa7.07□□□□□ -1.28
RPTOR-209ENST00000575542 VPS13CQ709C8 3753 aa7.07□□□□□ -1.28
RPTOR-209ENST00000575542 ZNF469Q96JG9 3925 aaPredicted RBP7.01□□□□□ -1.29
RPTOR-209ENST00000575542 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
RPTOR-209ENST00000575542 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
RPTOR-209ENST00000575542 AKAP9Q99996 3911 aa6.97□□□□□ -1.29
RPTOR-209ENST00000575542 DNAH9Q9NYC9 4486 aa6.87□□□□□ -1.31
RPTOR-209ENST00000575542 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
RPTOR-209ENST00000575542 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms