RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 CD164Q04900 197 aa7.74□□□□□ -1.17
LINC01996-201ENST00000573270 SS18L2Q9UHA2 77 aa7.74□□□□□ -1.17
LINC01996-201ENST00000573270 BPY2O14599 106 aa7.73□□□□□ -1.17
LINC01996-201ENST00000573270 HMCN2Q8NDA2 5059 aa7.72□□□□□ -1.17
LINC01996-201ENST00000573270 RPS29P62273 56 aaKnown RBP7.72□□□□□ -1.17
LINC01996-201ENST00000573270 RETNLBQ9BQ08 111 aa7.72□□□□□ -1.17
LINC01996-201ENST00000573270 LIMD2Q9BT23 127 aa7.72□□□□□ -1.17
LINC01996-201ENST00000573270 KRTAP4-8A0A0G2JLE6 195 aa7.71□□□□□ -1.18
LINC01996-201ENST00000573270 J3KT08 172 aa7.71□□□□□ -1.18
LINC01996-201ENST00000573270 HIST1H4AP62805 103 aaKnown RBP7.71□□□□□ -1.18
LINC01996-201ENST00000573270 A0A087WSZ3 146 aa7.69□□□□□ -1.18
LINC01996-201ENST00000573270 IGKV3D-7A0A0C4DH55 119 aa7.69□□□□□ -1.18
LINC01996-201ENST00000573270 PCP4P48539 62 aa7.69□□□□□ -1.18
LINC01996-201ENST00000573270 SMIM20Q8N5G0 67 aa7.69□□□□□ -1.18
LINC01996-201ENST00000573270 ATOX1O00244 68 aa7.66□□□□□ -1.18
LINC01996-201ENST00000573270 NDUFB1O75438 58 aa7.65□□□□□ -1.18
LINC01996-201ENST00000573270 Q5XG85 94 aa7.65□□□□□ -1.18
LINC01996-201ENST00000573270 ANAPC13Q9BS18 74 aa7.64□□□□□ -1.19
LINC01996-201ENST00000573270 PRR4Q16378 134 aa7.62□□□□□ -1.19
LINC01996-201ENST00000573270 ASB16-AS1Q495Z4 193 aa7.61□□□□□ -1.19
LINC01996-201ENST00000573270 C1orf195Q5TG92 126 aa7.61□□□□□ -1.19
LINC01996-201ENST00000573270 FAM236AA0A1B0GUQ0 79 aa7.6□□□□□ -1.19
LINC01996-201ENST00000573270 FAM236BA0A1B0GV22 79 aa7.6□□□□□ -1.19
LINC01996-201ENST00000573270 Q96NJ1 140 aa7.59□□□□□ -1.19
LINC01996-201ENST00000573270 FP248Q71RG6 208 aaPredicted RBP7.57□□□□□ -1.2
LINC01996-201ENST00000573270 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
LINC01996-201ENST00000573270 IGLV7-46A0A075B6I9 117 aa7.54□□□□□ -1.2
LINC01996-201ENST00000573270 A8MWP4 228 aa7.54□□□□□ -1.2
LINC01996-201ENST00000573270 DEFB116Q30KQ4 102 aa7.54□□□□□ -1.2
LINC01996-201ENST00000573270 LINC00472Q9H8W2 130 aa7.54□□□□□ -1.2
LINC01996-201ENST00000573270 LPAP08519 4548 aa7.53□□□□□ -1.2
LINC01996-201ENST00000573270 SERP2Q8N6R1 65 aa7.52□□□□□ -1.21
LINC01996-201ENST00000573270 UQCRQO14949 82 aa7.51□□□□□ -1.21
LINC01996-201ENST00000573270 IGKV4-1P06312 121 aa7.51□□□□□ -1.21
LINC01996-201ENST00000573270 PRR15Q8IV56 129 aa7.51□□□□□ -1.21
LINC01996-201ENST00000573270 TRAV7A0A075B6U4 112 aa7.5□□□□□ -1.21
LINC01996-201ENST00000573270 A0A087WVE0 104 aa7.5□□□□□ -1.21
LINC01996-201ENST00000573270 DSCR10P59022 87 aa7.49□□□□□ -1.21
LINC01996-201ENST00000573270 HCG22E2RYF7 251 aa7.48□□□□□ -1.21
LINC01996-201ENST00000573270 COX7CP15954 63 aa7.48□□□□□ -1.21
LINC01996-201ENST00000573270 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
LINC01996-201ENST00000573270 C9orf92A6NGG3 77 aa7.47□□□□□ -1.21
LINC01996-201ENST00000573270 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
LINC01996-201ENST00000573270 KRTAP4-7Q9BYR0 210 aa7.47□□□□□ -1.21
LINC01996-201ENST00000573270 LRP2P98164 4655 aa7.46□□□□□ -1.22
LINC01996-201ENST00000573270 UBR4Q5T4S7 5183 aa7.45□□□□□ -1.22
LINC01996-201ENST00000573270 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
LINC01996-201ENST00000573270 K7EQZ3 153 aa7.44□□□□□ -1.22
LINC01996-201ENST00000573270 CASC2Q6XLA1 102 aa7.43□□□□□ -1.22
LINC01996-201ENST00000573270 TP53AIP1Q9HCN2 124 aa7.43□□□□□ -1.22
LINC01996-201ENST00000573270 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
LINC01996-201ENST00000573270 A0A1B0GVX0 72 aa7.42□□□□□ -1.22
LINC01996-201ENST00000573270 C5orf47Q569G3 176 aa7.42□□□□□ -1.22
LINC01996-201ENST00000573270 Q8N9L7 120 aa7.42□□□□□ -1.22
LINC01996-201ENST00000573270 hDV103S1A0JD37 113 aa7.39□□□□□ -1.23
LINC01996-201ENST00000573270 NDUFC1O43677 76 aa7.39□□□□□ -1.23
LINC01996-201ENST00000573270 MUC17Q685J3 4493 aa7.39□□□□□ -1.23
LINC01996-201ENST00000573270 MP68P56378 58 aa7.37□□□□□ -1.23
LINC01996-201ENST00000573270 LCE1DQ5T752 114 aa7.37□□□□□ -1.23
LINC01996-201ENST00000573270 NOTCH2NLQ7Z3S9 236 aa7.37□□□□□ -1.23
LINC01996-201ENST00000573270 H3BPC8 53 aa7.36□□□□□ -1.23
LINC01996-201ENST00000573270 C8orf17Q9NRJ1 99 aa7.36□□□□□ -1.23
LINC01996-201ENST00000573270 RNF213Q63HN8 5207 aa7.35□□□□□ -1.23
LINC01996-201ENST00000573270 LINC00313P59037 77 aa7.35□□□□□ -1.23
LINC01996-201ENST00000573270 TMEM254Q8TBM7 123 aa7.35□□□□□ -1.23
LINC01996-201ENST00000573270 OCR1Q9BZK8 76 aa7.35□□□□□ -1.23
LINC01996-201ENST00000573270 WFDC13Q8IUB5 93 aa7.34□□□□□ -1.23
LINC01996-201ENST00000573270 MMP24-AS1A0A0U1RRL7 71 aa7.33□□□□□ -1.24
LINC01996-201ENST00000573270 KRTAP16-1A8MUX0 517 aa7.33□□□□□ -1.24
LINC01996-201ENST00000573270 MRPL34Q9BQ48 92 aaKnown RBP7.32□□□□□ -1.24
LINC01996-201ENST00000573270 CCDC179H3BU77 68 aa7.31□□□□□ -1.24
LINC01996-201ENST00000573270 KLKP1Q107X0 134 aa7.29□□□□□ -1.24
LINC01996-201ENST00000573270 C20orf197Q8N268 126 aa7.29□□□□□ -1.24
LINC01996-201ENST00000573270 NDUFS5O43920 106 aa7.28□□□□□ -1.24
LINC01996-201ENST00000573270 RPL37P61927 97 aaKnown RBP7.28□□□□□ -1.24
LINC01996-201ENST00000573270 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
LINC01996-201ENST00000573270 A8MUU9 505 aa7.25□□□□□ -1.25
LINC01996-201ENST00000573270 Q75L30 129 aa7.25□□□□□ -1.25
LINC01996-201ENST00000573270 TMEM258P61165 79 aa7.24□□□□□ -1.25
LINC01996-201ENST00000573270 TRAV22A0A0B4J277 110 aa7.22□□□□□ -1.25
LINC01996-201ENST00000573270 ATP5EP56381 51 aaPredicted RBP7.22□□□□□ -1.25
LINC01996-201ENST00000573270 SEC61BP60468 96 aaKnown RBP7.21□□□□□ -1.26
LINC01996-201ENST00000573270 PCOTHQ58A44 107 aa7.21□□□□□ -1.26
LINC01996-201ENST00000573270 KRTAP4-9Q9BYQ8 210 aa7.21□□□□□ -1.26
LINC01996-201ENST00000573270 A0A0U1RQV1 116 aa7.2□□□□□ -1.26
LINC01996-201ENST00000573270 H0Y9P7 68 aa7.2□□□□□ -1.26
LINC01996-201ENST00000573270 Q8N9P0 234 aaPredicted RBP7.19□□□□□ -1.26
LINC01996-201ENST00000573270 C1orf64Q8NEQ6 169 aa7.18□□□□□ -1.26
LINC01996-201ENST00000573270 LINC00208Q96KT6 92 aa7.17□□□□□ -1.26
LINC01996-201ENST00000573270 ATP11AUNQ6ZP68 121 aa7.16□□□□□ -1.26
LINC01996-201ENST00000573270 SNURFQ9Y675 71 aa7.16□□□□□ -1.26
LINC01996-201ENST00000573270 LOC101927531A0A1B0GV80 90 aa7.15□□□□□ -1.26
LINC01996-201ENST00000573270 KRTAP4-2Q9BYR5 136 aa7.15□□□□□ -1.26
LINC01996-201ENST00000573270 ZCCHC13Q8WW36 166 aaKnown RBP7.13□□□□□ -1.27
LINC01996-201ENST00000573270 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
LINC01996-201ENST00000573270 H7BZZ5 65 aa7.12□□□□□ -1.27
LINC01996-201ENST00000573270 MUC2Q02817 5179 aa7.12□□□□□ -1.27
LINC01996-201ENST00000573270 RPS28P62857 69 aaKnown RBP7.11□□□□□ -1.27
LINC01996-201ENST00000573270 FAM236DA0A1B0GTK5 79 aa7.09□□□□□ -1.27
LINC01996-201ENST00000573270 FAM236CP0DP71 79 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms