RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 EP400Q96L91 3159 aa4.03□□□□□ -1.76
TRIM25-203ENST00000570473 TACC2O95359 2948 aa4.03□□□□□ -1.76
TRIM25-203ENST00000570473 MEGF8Q7Z7M0 2845 aa4.01□□□□□ -1.77
TRIM25-203ENST00000570473 LAMA1P25391 3075 aa4□□□□□ -1.77
TRIM25-203ENST00000570473 KRTAP9-3Q9BYQ3 159 aa3.99□□□□□ -1.77
TRIM25-203ENST00000570473 TLN1Q9Y490 2541 aaKnown RBP3.99□□□□□ -1.77
TRIM25-203ENST00000570473 APCP25054 2843 aa3.99□□□□□ -1.77
TRIM25-203ENST00000570473 KRTAP10-2P60368 255 aa3.98□□□□□ -1.77
TRIM25-203ENST00000570473 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
TRIM25-203ENST00000570473 DMXL2Q8TDJ6 3036 aa3.98□□□□□ -1.77
TRIM25-203ENST00000570473 CELSR3Q9NYQ7 3312 aa3.97□□□□□ -1.77
TRIM25-203ENST00000570473 SONP18583 2426 aaKnown RBP3.97□□□□□ -1.77
TRIM25-203ENST00000570473 CEP290O15078 2479 aa3.97□□□□□ -1.77
TRIM25-203ENST00000570473 FREM2Q5SZK8 3169 aa3.96□□□□□ -1.77
TRIM25-203ENST00000570473 SPTAN1Q13813 2472 aaKnown RBP3.96□□□□□ -1.78
TRIM25-203ENST00000570473 ATMQ13315 3056 aa3.95□□□□□ -1.78
TRIM25-203ENST00000570473 PTPN13Q12923 2485 aa3.94□□□□□ -1.78
TRIM25-203ENST00000570473 SPENQ96T58 3664 aaKnown RBP3.94□□□□□ -1.78
TRIM25-203ENST00000570473 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
TRIM25-203ENST00000570473 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
TRIM25-203ENST00000570473 PKD1L2Q7Z442 2459 aa3.91□□□□□ -1.78
TRIM25-203ENST00000570473 KRTAP4-5Q9BYR2 181 aa3.91□□□□□ -1.78
TRIM25-203ENST00000570473 WDFY3Q8IZQ1 3526 aa3.9□□□□□ -1.78
TRIM25-203ENST00000570473 KRTAP10-11P60412 298 aa3.9□□□□□ -1.79
TRIM25-203ENST00000570473 TEX15Q9BXT5 2789 aa3.89□□□□□ -1.79
TRIM25-203ENST00000570473 TLN2Q9Y4G6 2542 aa3.88□□□□□ -1.79
TRIM25-203ENST00000570473 SETD2Q9BYW2 2564 aaPredicted RBP3.88□□□□□ -1.79
TRIM25-203ENST00000570473 NIPBLQ6KC79 2804 aaeCLIP3.88□□□□□ -1.79
TRIM25-203ENST00000570473 CSMD1Q96PZ7 3565 aa3.88□□□□□ -1.79
TRIM25-203ENST00000570473 KRTAP10-9P60411 292 aa3.87□□□□□ -1.79
TRIM25-203ENST00000570473 LAMA5O15230 3695 aa3.86□□□□□ -1.79
TRIM25-203ENST00000570473 DMBT1Q9UGM3 2413 aaPredicted RBP3.85□□□□□ -1.79
TRIM25-203ENST00000570473 LOC400499M0QZD8 3231 aa3.85□□□□□ -1.79
TRIM25-203ENST00000570473 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
TRIM25-203ENST00000570473 USP9XQ93008 2570 aaPredicted RBP3.84□□□□□ -1.79
TRIM25-203ENST00000570473 LAMA3Q16787 3333 aa3.84□□□□□ -1.79
TRIM25-203ENST00000570473 TNP1P09430 55 aa3.84□□□□□ -1.79
TRIM25-203ENST00000570473 DNAH11Q96DT5 4516 aa3.84□□□□□ -1.8
TRIM25-203ENST00000570473 CENPEQ02224 2701 aa3.84□□□□□ -1.8
TRIM25-203ENST00000570473 DCHS2Q6V1P9 2916 aa3.83□□□□□ -1.8
TRIM25-203ENST00000570473 TTC28Q96AY4 2481 aa3.82□□□□□ -1.8
TRIM25-203ENST00000570473 BSNQ9UPA5 3926 aa3.82□□□□□ -1.8
TRIM25-203ENST00000570473 SETXQ7Z333 2677 aaKnown RBP3.81□□□□□ -1.8
TRIM25-203ENST00000570473 LRRK2Q5S007 2527 aa3.8□□□□□ -1.8
TRIM25-203ENST00000570473 FRAS1Q86XX4 4008 aa3.8□□□□□ -1.8
TRIM25-203ENST00000570473 KRTAP10-10P60014 251 aa3.8□□□□□ -1.8
TRIM25-203ENST00000570473 UTP20O75691 2785 aaKnown RBP3.79□□□□□ -1.8
TRIM25-203ENST00000570473 ITPR3Q14573 2671 aa3.77□□□□□ -1.81
TRIM25-203ENST00000570473 DNAH1Q9P2D7 4330 aa3.77□□□□□ -1.81
TRIM25-203ENST00000570473 RELNP78509 3460 aa3.76□□□□□ -1.81
TRIM25-203ENST00000570473 DOPEY1Q5JWR5 2465 aa3.76□□□□□ -1.81
TRIM25-203ENST00000570473 BRCA2P51587 3418 aa3.75□□□□□ -1.81
TRIM25-203ENST00000570473 KRTAP1-5Q9BYS1 174 aa3.75□□□□□ -1.81
TRIM25-203ENST00000570473 MTORP42345 2549 aa3.75□□□□□ -1.81
TRIM25-203ENST00000570473 C9orf92A6NGG3 77 aa3.74□□□□□ -1.81
TRIM25-203ENST00000570473 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
TRIM25-203ENST00000570473 ABCA12Q86UK0 2595 aa3.74□□□□□ -1.81
TRIM25-203ENST00000570473 SMG1Q96Q15 3661 aaKnown RBP3.74□□□□□ -1.81
TRIM25-203ENST00000570473 CFAP46Q8IYW2 2715 aa3.73□□□□□ -1.81
TRIM25-203ENST00000570473 TGP01266 2768 aa3.73□□□□□ -1.81
TRIM25-203ENST00000570473 TRRAPQ9Y4A5 3859 aa3.73□□□□□ -1.81
TRIM25-203ENST00000570473 VCANP13611 3396 aa3.72□□□□□ -1.81
TRIM25-203ENST00000570473 CDH23Q9H251 3354 aa3.72□□□□□ -1.81
TRIM25-203ENST00000570473 USP9YO00507 2555 aaPredicted RBP3.71□□□□□ -1.82
TRIM25-203ENST00000570473 CHD8Q9HCK8 2581 aa3.71□□□□□ -1.82
TRIM25-203ENST00000570473 TENM4Q6N022 2769 aa3.71□□□□□ -1.82
TRIM25-203ENST00000570473 HELZ2Q9BYK8 2649 aaKnown RBP3.71□□□□□ -1.82
TRIM25-203ENST00000570473 COL7A1Q02388 2944 aa3.71□□□□□ -1.82
TRIM25-203ENST00000570473 ZFYVE26Q68DK2 2539 aa3.7□□□□□ -1.82
TRIM25-203ENST00000570473 KRTAP1-4P0C5Y4 121 aa3.7□□□□□ -1.82
TRIM25-203ENST00000570473 ASPMQ8IZT6 3477 aa3.7□□□□□ -1.82
TRIM25-203ENST00000570473 HRNRQ86YZ3 2850 aaPredicted RBP3.69□□□□□ -1.82
TRIM25-203ENST00000570473 ACANP16112 2415 aa3.69□□□□□ -1.82
TRIM25-203ENST00000570473 SMR3AQ99954 134 aa3.69□□□□□ -1.82
TRIM25-203ENST00000570473 MYCBP2O75592 4640 aa3.69□□□□□ -1.82
TRIM25-203ENST00000570473 HECTD1Q9ULT8 2610 aa3.68□□□□□ -1.82
TRIM25-203ENST00000570473 GCN1Q92616 2671 aaKnown RBP3.66□□□□□ -1.82
TRIM25-203ENST00000570473 CACNA1AO00555 2505 aa3.65□□□□□ -1.83
TRIM25-203ENST00000570473 UNC79Q9P2D8 2635 aa3.64□□□□□ -1.83
TRIM25-203ENST00000570473 KRTAP10-1P60331 282 aa3.64□□□□□ -1.83
TRIM25-203ENST00000570473 LYSTQ99698 3801 aa3.64□□□□□ -1.83
TRIM25-203ENST00000570473 NBEAL2Q6ZNJ1 2754 aa3.63□□□□□ -1.83
TRIM25-203ENST00000570473 EPG5Q9HCE0 2579 aa3.63□□□□□ -1.83
TRIM25-203ENST00000570473 USP24Q9UPU5 2620 aa3.63□□□□□ -1.83
TRIM25-203ENST00000570473 DNAH8Q96JB1 4490 aa3.63□□□□□ -1.83
TRIM25-203ENST00000570473 MYO9AB2RTY4 2548 aa3.63□□□□□ -1.83
TRIM25-203ENST00000570473 ADGRG4Q8IZF6 3080 aa3.62□□□□□ -1.83
TRIM25-203ENST00000570473 PDZD2O15018 2839 aa3.62□□□□□ -1.83
TRIM25-203ENST00000570473 NBEAL1Q6ZS30 2694 aa3.62□□□□□ -1.83
TRIM25-203ENST00000570473 MYO15AQ9UKN7 3530 aa3.59□□□□□ -1.83
TRIM25-203ENST00000570473 ANK2Q01484 3957 aa3.59□□□□□ -1.84
TRIM25-203ENST00000570473 BDP1A6H8Y1 2624 aa3.57□□□□□ -1.84
TRIM25-203ENST00000570473 CMYA5Q8N3K9 4069 aa3.57□□□□□ -1.84
TRIM25-203ENST00000570473 DNAH2Q9P225 4427 aa3.56□□□□□ -1.84
TRIM25-203ENST00000570473 DNAH3Q8TD57 4116 aa3.56□□□□□ -1.84
TRIM25-203ENST00000570473 CSMD3Q7Z407 3707 aa3.55□□□□□ -1.84
TRIM25-203ENST00000570473 PIEZO1Q92508 2521 aa3.55□□□□□ -1.84
TRIM25-203ENST00000570473 MUC3AQ02505 3323 aa3.54□□□□□ -1.84
TRIM25-203ENST00000570473 DYNC2H1Q8NCM8 4307 aaKnown RBP3.54□□□□□ -1.84
TRIM25-203ENST00000570473 DNAH6Q9C0G6 4158 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms