RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 A0A1B0GVX0 72 aa9□□□□□ -0.97
EDC3-215ENST00000569007 LYRM7Q5U5X0 104 aa9□□□□□ -0.97
EDC3-215ENST00000569007 LOC105371267A0A1B0GV96 52 aa8.99□□□□□ -0.97
EDC3-215ENST00000569007 LOC110117498A0A087WWA1 95 aa8.98□□□□□ -0.97
EDC3-215ENST00000569007 TRBV20-1A0A075B6N2 111 aa8.97□□□□□ -0.97
EDC3-215ENST00000569007 KRTAP9-6A0A140TA67 174 aa8.97□□□□□ -0.97
EDC3-215ENST00000569007 C8orf87E5RJ46 101 aa8.97□□□□□ -0.97
EDC3-215ENST00000569007 J3KT08 172 aa8.97□□□□□ -0.97
EDC3-215ENST00000569007 PDE6GP18545 87 aa8.95□□□□□ -0.98
EDC3-215ENST00000569007 C14orf132Q9NPU4 83 aa8.95□□□□□ -0.98
EDC3-215ENST00000569007 FSIP2Q5CZC0 6907 aa8.94□□□□□ -0.98
EDC3-215ENST00000569007 A0A1B0GW54 56 aa8.93□□□□□ -0.98
EDC3-215ENST00000569007 C9orf118A6NHY6 69 aa8.91□□□□□ -0.98
EDC3-215ENST00000569007 NDUFB1O75438 58 aa8.9□□□□□ -0.98
EDC3-215ENST00000569007 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
EDC3-215ENST00000569007 A0A1W2PPM0 123 aa8.88□□□□□ -0.99
EDC3-215ENST00000569007 A8MWP4 228 aa8.87□□□□□ -0.99
EDC3-215ENST00000569007 IGKV3D-7A0A0C4DH55 119 aa8.85□□□□□ -0.99
EDC3-215ENST00000569007 H3BT86 120 aa8.85□□□□□ -0.99
EDC3-215ENST00000569007 HRES1P13985 223 aa8.85□□□□□ -0.99
EDC3-215ENST00000569007 MTURNQ8N3F0 131 aa8.85□□□□□ -0.99
EDC3-215ENST00000569007 ZCCHC13Q8WW36 166 aaKnown RBP8.84□□□□□ -0.99
EDC3-215ENST00000569007 C8orf17Q9NRJ1 99 aa8.84□□□□□ -0.99
EDC3-215ENST00000569007 FAM236DA0A1B0GTK5 79 aa8.83□□□□□ -1
EDC3-215ENST00000569007 FAM236CP0DP71 79 aa8.83□□□□□ -1
EDC3-215ENST00000569007 NREPQ16612 68 aa8.83□□□□□ -1
EDC3-215ENST00000569007 MPLKIPQ8TAP9 179 aa8.83□□□□□ -1
EDC3-215ENST00000569007 Q8N9P0 234 aaPredicted RBP8.82□□□□□ -1
EDC3-215ENST00000569007 RBM12B-AS1Q9P1G2 102 aa8.81□□□□□ -1
EDC3-215ENST00000569007 CRCT1Q9UGL9 99 aa8.8□□□□□ -1
EDC3-215ENST00000569007 PRR15Q8IV56 129 aa8.79□□□□□ -1
EDC3-215ENST00000569007 Q6ZVQ6 151 aa8.76□□□□□ -1.01
EDC3-215ENST00000569007 SPINK7P58062 85 aa8.75□□□□□ -1.01
EDC3-215ENST00000569007 SPCS1Q9Y6A9 102 aa8.75□□□□□ -1.01
EDC3-215ENST00000569007 KRTAP9-8Q9BYQ0 159 aa8.73□□□□□ -1.01
EDC3-215ENST00000569007 MMP24-AS1A0A0U1RRL7 71 aa8.72□□□□□ -1.01
EDC3-215ENST00000569007 K7EQZ3 153 aa8.71□□□□□ -1.02
EDC3-215ENST00000569007 TMEM254Q8TBM7 123 aa8.7□□□□□ -1.02
EDC3-215ENST00000569007 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
EDC3-215ENST00000569007 COL5A1-AS1Q5SY13 56 aa8.69□□□□□ -1.02
EDC3-215ENST00000569007 MRPL34Q9BQ48 92 aaKnown RBP8.69□□□□□ -1.02
EDC3-215ENST00000569007 BPY2O14599 106 aa8.67□□□□□ -1.02
EDC3-215ENST00000569007 hDV103S1A0JD37 113 aa8.66□□□□□ -1.02
EDC3-215ENST00000569007 WFDC13Q8IUB5 93 aa8.64□□□□□ -1.03
EDC3-215ENST00000569007 NDUFS5O43920 106 aa8.62□□□□□ -1.03
EDC3-215ENST00000569007 MT2AP02795 61 aa8.62□□□□□ -1.03
EDC3-215ENST00000569007 PRO0461Q9UI25 63 aa8.62□□□□□ -1.03
EDC3-215ENST00000569007 K7EP34 96 aa8.61□□□□□ -1.03
EDC3-215ENST00000569007 Q8N9L7 120 aa8.61□□□□□ -1.03
EDC3-215ENST00000569007 LINC00846Q9NV44 126 aa8.56□□□□□ -1.04
EDC3-215ENST00000569007 MT1FP04733 61 aa8.55□□□□□ -1.04
EDC3-215ENST00000569007 CASC2Q6XLA1 102 aa8.55□□□□□ -1.04
EDC3-215ENST00000569007 USH2AO75445 5202 aa8.53□□□□□ -1.04
EDC3-215ENST00000569007 Q5W150 140 aa8.53□□□□□ -1.04
EDC3-215ENST00000569007 UBL5Q9BZL1 73 aa8.53□□□□□ -1.04
EDC3-215ENST00000569007 PCP4L1A6NKN8 68 aa8.51□□□□□ -1.05
EDC3-215ENST00000569007 KRTAP10-10P60014 251 aa8.51□□□□□ -1.05
EDC3-215ENST00000569007 IGKV2D-30A0A075B6S6 120 aa8.5□□□□□ -1.05
EDC3-215ENST00000569007 HCG22E2RYF7 251 aa8.5□□□□□ -1.05
EDC3-215ENST00000569007 IGKV2-30P06310 120 aa8.5□□□□□ -1.05
EDC3-215ENST00000569007 GTF2H5Q6ZYL4 71 aa8.5□□□□□ -1.05
EDC3-215ENST00000569007 C7orf65Q6ZTY9 151 aa8.46□□□□□ -1.06
EDC3-215ENST00000569007 SSPOA2VEC9 5147 aa8.45□□□□□ -1.06
EDC3-215ENST00000569007 KRTAP9-3Q9BYQ3 159 aa8.45□□□□□ -1.06
EDC3-215ENST00000569007 F8W1H4 67 aa8.44□□□□□ -1.06
EDC3-215ENST00000569007 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
EDC3-215ENST00000569007 CXCL6P80162 114 aa8.43□□□□□ -1.06
EDC3-215ENST00000569007 ETDBQ3ZM63 59 aa8.42□□□□□ -1.06
EDC3-215ENST00000569007 LCE2BO14633 110 aa8.41□□□□□ -1.06
EDC3-215ENST00000569007 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
EDC3-215ENST00000569007 TP53AIP1Q9HCN2 124 aa8.28□□□□□ -1.08
EDC3-215ENST00000569007 KRTAP19-1Q8IUB9 90 aa8.25□□□□□ -1.09
EDC3-215ENST00000569007 FCGBPQ9Y6R7 5405 aaPredicted RBP8.25□□□□□ -1.09
EDC3-215ENST00000569007 KRTAP3-1Q9BYR8 98 aa8.23□□□□□ -1.09
EDC3-215ENST00000569007 ACYP1P07311 99 aa8.21□□□□□ -1.1
EDC3-215ENST00000569007 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.19□□□□□ -1.1
EDC3-215ENST00000569007 C1orf64Q8NEQ6 169 aa8.19□□□□□ -1.1
EDC3-215ENST00000569007 FAM240AA0A1B0GVK7 77 aa8.17□□□□□ -1.1
EDC3-215ENST00000569007 C5orf47Q569G3 176 aa8.17□□□□□ -1.1
EDC3-215ENST00000569007 ATP5EP2Q5VTU8 51 aa8.14□□□□□ -1.11
EDC3-215ENST00000569007 S4R3F8 94 aa8.14□□□□□ -1.11
EDC3-215ENST00000569007 CYP4F30PQ9H0H9 118 aa8.12□□□□□ -1.11
EDC3-215ENST00000569007 HIST1H4AP62805 103 aaKnown RBP8.11□□□□□ -1.11
EDC3-215ENST00000569007 TRAV22A0A0B4J277 110 aa8.1□□□□□ -1.11
EDC3-215ENST00000569007 LCA10Q71F78 164 aa8.1□□□□□ -1.11
EDC3-215ENST00000569007 KRTAP19-6Q3LI70 58 aa8.09□□□□□ -1.11
EDC3-215ENST00000569007 CSAG1Q6PB30 78 aa8.09□□□□□ -1.11
EDC3-215ENST00000569007 KRTAP9-7A8MTY7 169 aa8.08□□□□□ -1.12
EDC3-215ENST00000569007 MACF1Q9UPN3 7388 aaKnown RBP8.07□□□□□ -1.12
EDC3-215ENST00000569007 LOC101927531A0A1B0GV80 90 aa8.07□□□□□ -1.12
EDC3-215ENST00000569007 FAM236AA0A1B0GUQ0 79 aa8.04□□□□□ -1.12
EDC3-215ENST00000569007 FAM236BA0A1B0GV22 79 aa8.04□□□□□ -1.12
EDC3-215ENST00000569007 A0A1B0GV90 55 aa8.03□□□□□ -1.12
EDC3-215ENST00000569007 UQCRQO14949 82 aa8.03□□□□□ -1.12
EDC3-215ENST00000569007 LINC00643Q86TS7 51 aa8.03□□□□□ -1.12
EDC3-215ENST00000569007 A0A087WVE0 104 aa8.01□□□□□ -1.13
EDC3-215ENST00000569007 H0Y9P7 68 aa8□□□□□ -1.13
EDC3-215ENST00000569007 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
EDC3-215ENST00000569007 ATOX1O00244 68 aa7.98□□□□□ -1.13
EDC3-215ENST00000569007 SYNE2Q8WXH0 6885 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms