RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 J3KT08 172 aa10.69□□□□□ -0.7
COMMD4-213ENST00000565834 CCDC179H3BU77 68 aa10.69□□□□□ -0.7
COMMD4-213ENST00000565834 IGKV4-1P06312 121 aa10.68□□□□□ -0.7
COMMD4-213ENST00000565834 DMBT1Q9UGM3 2413 aaPredicted RBP10.68□□□□□ -0.7
COMMD4-213ENST00000565834 C1orf195Q5TG92 126 aa10.67□□□□□ -0.7
COMMD4-213ENST00000565834 COX7CP15954 63 aa10.66□□□□□ -0.7
COMMD4-213ENST00000565834 DSCR10P59022 87 aa10.66□□□□□ -0.7
COMMD4-213ENST00000565834 Q8N9L7 120 aa10.63□□□□□ -0.71
COMMD4-213ENST00000565834 A8MWP4 228 aa10.61□□□□□ -0.71
COMMD4-213ENST00000565834 SERP2Q8N6R1 65 aa10.61□□□□□ -0.71
COMMD4-213ENST00000565834 K7EQZ3 153 aa10.6□□□□□ -0.71
COMMD4-213ENST00000565834 NDUFB1O75438 58 aa10.6□□□□□ -0.71
COMMD4-213ENST00000565834 J3QL48 77 aa10.59□□□□□ -0.71
COMMD4-213ENST00000565834 SMIM20Q8N5G0 67 aa10.58□□□□□ -0.72
COMMD4-213ENST00000565834 PRR15Q8IV56 129 aa10.57□□□□□ -0.72
COMMD4-213ENST00000565834 RETNLBQ9BQ08 111 aa10.57□□□□□ -0.72
COMMD4-213ENST00000565834 A0A087WVE0 104 aa10.56□□□□□ -0.72
COMMD4-213ENST00000565834 A0A1B0GVX0 72 aa10.54□□□□□ -0.72
COMMD4-213ENST00000565834 IGHV6-1A0A0B4J1U7 121 aa10.53□□□□□ -0.72
COMMD4-213ENST00000565834 FP248Q71RG6 208 aaPredicted RBP10.47□□□□□ -0.73
COMMD4-213ENST00000565834 HCG22E2RYF7 251 aa10.46□□□□□ -0.74
COMMD4-213ENST00000565834 C8orf17Q9NRJ1 99 aa10.46□□□□□ -0.74
COMMD4-213ENST00000565834 TRAV7A0A075B6U4 112 aa10.45□□□□□ -0.74
COMMD4-213ENST00000565834 MMP24-AS1A0A0U1RRL7 71 aa10.44□□□□□ -0.74
COMMD4-213ENST00000565834 C8orf87E5RJ46 101 aa10.44□□□□□ -0.74
COMMD4-213ENST00000565834 NOTCH2NLQ7Z3S9 236 aa10.43□□□□□ -0.74
COMMD4-213ENST00000565834 WFDC13Q8IUB5 93 aa10.43□□□□□ -0.74
COMMD4-213ENST00000565834 LINC00313P59037 77 aa10.42□□□□□ -0.74
COMMD4-213ENST00000565834 TMEM258P61165 79 aa10.41□□□□□ -0.74
COMMD4-213ENST00000565834 CASC2Q6XLA1 102 aa10.41□□□□□ -0.74
COMMD4-213ENST00000565834 HERC1Q15751 4861 aa10.41□□□□□ -0.74
COMMD4-213ENST00000565834 hDV103S1A0JD37 113 aa10.4□□□□□ -0.74
COMMD4-213ENST00000565834 IGLV7-46A0A075B6I9 117 aa10.39□□□□□ -0.75
COMMD4-213ENST00000565834 PRR4Q16378 134 aa10.38□□□□□ -0.75
COMMD4-213ENST00000565834 TMEM254Q8TBM7 123 aa10.35□□□□□ -0.75
COMMD4-213ENST00000565834 C9orf92A6NGG3 77 aa10.34□□□□□ -0.75
COMMD4-213ENST00000565834 RPS28P62857 69 aaKnown RBP10.32□□□□□ -0.76
COMMD4-213ENST00000565834 MRPL34Q9BQ48 92 aaKnown RBP10.32□□□□□ -0.76
COMMD4-213ENST00000565834 KRTAP16-1A8MUX0 517 aa10.31□□□□□ -0.76
COMMD4-213ENST00000565834 KLKP1Q107X0 134 aa10.3□□□□□ -0.76
COMMD4-213ENST00000565834 NDUFC1O43677 76 aa10.29□□□□□ -0.76
COMMD4-213ENST00000565834 KRTAP13-3Q3SY46 172 aa10.28□□□□□ -0.76
COMMD4-213ENST00000565834 C20orf197Q8N268 126 aa10.28□□□□□ -0.76
COMMD4-213ENST00000565834 NDUFS5O43920 106 aa10.25□□□□□ -0.77
COMMD4-213ENST00000565834 Q8N9P0 234 aaPredicted RBP10.24□□□□□ -0.77
COMMD4-213ENST00000565834 TPRXLQ17RH7 258 aa10.23□□□□□ -0.77
COMMD4-213ENST00000565834 OCR1Q9BZK8 76 aa10.22□□□□□ -0.77
COMMD4-213ENST00000565834 CYSTM1Q9H1C7 97 aa10.22□□□□□ -0.77
COMMD4-213ENST00000565834 ATP5EP56381 51 aaPredicted RBP10.18□□□□□ -0.78
COMMD4-213ENST00000565834 C20orf166-AS1Q96NR2 134 aa10.18□□□□□ -0.78
COMMD4-213ENST00000565834 TP53AIP1Q9HCN2 124 aa10.18□□□□□ -0.78
COMMD4-213ENST00000565834 A8MUU9 505 aa10.17□□□□□ -0.78
COMMD4-213ENST00000565834 H7BZZ5 65 aa10.17□□□□□ -0.78
COMMD4-213ENST00000565834 XP32Q5T750 250 aa10.17□□□□□ -0.78
COMMD4-213ENST00000565834 FAM236DA0A1B0GTK5 79 aa10.16□□□□□ -0.78
COMMD4-213ENST00000565834 FAM236CP0DP71 79 aa10.16□□□□□ -0.78
COMMD4-213ENST00000565834 Q75L30 129 aa10.14□□□□□ -0.79
COMMD4-213ENST00000565834 HMCN2Q8NDA2 5059 aa10.11□□□□□ -0.79
COMMD4-213ENST00000565834 SNURFQ9Y675 71 aa10.09□□□□□ -0.79
COMMD4-213ENST00000565834 A0A0U1RQV1 116 aa10.09□□□□□ -0.79
COMMD4-213ENST00000565834 RPL37P61927 97 aaKnown RBP10.09□□□□□ -0.79
COMMD4-213ENST00000565834 TRAV22A0A0B4J277 110 aa10.08□□□□□ -0.8
COMMD4-213ENST00000565834 C5orf47Q569G3 176 aa10.08□□□□□ -0.8
COMMD4-213ENST00000565834 SERP1Q9Y6X1 66 aa10.08□□□□□ -0.8
COMMD4-213ENST00000565834 LPAP08519 4548 aa10.08□□□□□ -0.8
COMMD4-213ENST00000565834 Q5W150 140 aa10.06□□□□□ -0.8
COMMD4-213ENST00000565834 ZCCHC13Q8WW36 166 aaKnown RBP10.06□□□□□ -0.8
COMMD4-213ENST00000565834 H0Y9P7 68 aa10.05□□□□□ -0.8
COMMD4-213ENST00000565834 MP68P56378 58 aa10.03□□□□□ -0.8
COMMD4-213ENST00000565834 ATP11AUNQ6ZP68 121 aa10.02□□□□□ -0.81
COMMD4-213ENST00000565834 LRP2P98164 4655 aa9.99□□□□□ -0.81
COMMD4-213ENST00000565834 H3BPC8 53 aa9.97□□□□□ -0.81
COMMD4-213ENST00000565834 LINC00208Q96KT6 92 aa9.97□□□□□ -0.81
COMMD4-213ENST00000565834 C1orf64Q8NEQ6 169 aa9.94□□□□□ -0.82
COMMD4-213ENST00000565834 LOC101927531A0A1B0GV80 90 aa9.92□□□□□ -0.82
COMMD4-213ENST00000565834 PCOTHQ58A44 107 aa9.92□□□□□ -0.82
COMMD4-213ENST00000565834 SEC61BP60468 96 aaKnown RBP9.9□□□□□ -0.82
COMMD4-213ENST00000565834 SMIM26A0A096LP01 95 aa9.9□□□□□ -0.83
COMMD4-213ENST00000565834 IGKV2D-30A0A075B6S6 120 aa9.89□□□□□ -0.83
COMMD4-213ENST00000565834 IGKV2-30P06310 120 aa9.89□□□□□ -0.83
COMMD4-213ENST00000565834 C7orf65Q6ZTY9 151 aa9.86□□□□□ -0.83
COMMD4-213ENST00000565834 CYP4F30PQ9H0H9 118 aa9.85□□□□□ -0.83
COMMD4-213ENST00000565834 SPINK7P58062 85 aa9.82□□□□□ -0.84
COMMD4-213ENST00000565834 SPANXA2-OT1Q8N9U9 137 aa9.78□□□□□ -0.84
COMMD4-213ENST00000565834 MUC17Q685J3 4493 aa9.77□□□□□ -0.85
COMMD4-213ENST00000565834 UBR4Q5T4S7 5183 aa9.75□□□□□ -0.85
COMMD4-213ENST00000565834 HRES1P13985 223 aa9.69□□□□□ -0.86
COMMD4-213ENST00000565834 C4orf26Q17RF5 130 aa9.68□□□□□ -0.86
COMMD4-213ENST00000565834 KRTAP4-1Q9BYQ7 146 aa9.66□□□□□ -0.86
COMMD4-213ENST00000565834 V9GYY9 64 aa9.6□□□□□ -0.87
COMMD4-213ENST00000565834 Q1T7F1 81 aa9.58□□□□□ -0.88
COMMD4-213ENST00000565834 MPLKIPQ8TAP9 179 aa9.55□□□□□ -0.88
COMMD4-213ENST00000565834 COX6B2Q6YFQ2 88 aa9.54□□□□□ -0.88
COMMD4-213ENST00000565834 RBM12B-AS1Q9P1G2 102 aa9.54□□□□□ -0.88
COMMD4-213ENST00000565834 DMAC1Q96GE9 116 aa9.51□□□□□ -0.89
COMMD4-213ENST00000565834 RNF213Q63HN8 5207 aa9.51□□□□□ -0.89
COMMD4-213ENST00000565834 A8MUN3 132 aa9.48□□□□□ -0.89
COMMD4-213ENST00000565834 KRTAP3-1Q9BYR8 98 aa9.48□□□□□ -0.89
COMMD4-213ENST00000565834 MUC2Q02817 5179 aa9.47□□□□□ -0.89
COMMD4-213ENST00000565834 PRO0628Q9UI54 55 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms