RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 TRBV20-1A0A075B6N2 111 aa8.84□□□□□ -0.99
MAP1LC3B-204ENST00000563720 BAALC-AS2P0C853 105 aa8.84□□□□□ -0.99
MAP1LC3B-204ENST00000563720 A0A1B0GVX0 72 aa8.8□□□□□ -1
MAP1LC3B-204ENST00000563720 C9JAW5 83 aa8.8□□□□□ -1
MAP1LC3B-204ENST00000563720 M0R143 59 aa8.79□□□□□ -1
MAP1LC3B-204ENST00000563720 NAA38Q9BRA0 125 aaKnown RBP8.79□□□□□ -1
MAP1LC3B-204ENST00000563720 KRTAP9-8Q9BYQ0 159 aa8.79□□□□□ -1
MAP1LC3B-204ENST00000563720 FCGBPQ9Y6R7 5405 aaPredicted RBP8.79□□□□□ -1
MAP1LC3B-204ENST00000563720 C8orf87E5RJ46 101 aa8.78□□□□□ -1
MAP1LC3B-204ENST00000563720 HRES1P13985 223 aa8.76□□□□□ -1.01
MAP1LC3B-204ENST00000563720 ATXN8Q156A1 80 aa8.76□□□□□ -1.01
MAP1LC3B-204ENST00000563720 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
MAP1LC3B-204ENST00000563720 Q6ZQT0 140 aa8.76□□□□□ -1.01
MAP1LC3B-204ENST00000563720 MPLKIPQ8TAP9 179 aa8.75□□□□□ -1.01
MAP1LC3B-204ENST00000563720 J3KT08 172 aa8.74□□□□□ -1.01
MAP1LC3B-204ENST00000563720 JMJD7-PLA2G4BH0Y9G9 81 aa8.72□□□□□ -1.01
MAP1LC3B-204ENST00000563720 LOC110117498A0A087WWA1 95 aa8.71□□□□□ -1.02
MAP1LC3B-204ENST00000563720 FAM236DA0A1B0GTK5 79 aa8.71□□□□□ -1.02
MAP1LC3B-204ENST00000563720 FAM236CP0DP71 79 aa8.71□□□□□ -1.02
MAP1LC3B-204ENST00000563720 KRTAP19-1Q8IUB9 90 aa8.7□□□□□ -1.02
MAP1LC3B-204ENST00000563720 RBM12B-AS1Q9P1G2 102 aa8.69□□□□□ -1.02
MAP1LC3B-204ENST00000563720 ZCCHC13Q8WW36 166 aaKnown RBP8.68□□□□□ -1.02
MAP1LC3B-204ENST00000563720 A0A1B0GW54 56 aa8.67□□□□□ -1.02
MAP1LC3B-204ENST00000563720 BATFQ16520 125 aa8.67□□□□□ -1.02
MAP1LC3B-204ENST00000563720 NDUFB1O75438 58 aa8.66□□□□□ -1.02
MAP1LC3B-204ENST00000563720 C14orf132Q9NPU4 83 aa8.66□□□□□ -1.02
MAP1LC3B-204ENST00000563720 A8MWP4 228 aa8.65□□□□□ -1.02
MAP1LC3B-204ENST00000563720 PDE6GP18545 87 aa8.65□□□□□ -1.02
MAP1LC3B-204ENST00000563720 Q8N9P0 234 aaPredicted RBP8.65□□□□□ -1.02
MAP1LC3B-204ENST00000563720 LYRM7Q5U5X0 104 aa8.63□□□□□ -1.03
MAP1LC3B-204ENST00000563720 C8orf17Q9NRJ1 99 aa8.63□□□□□ -1.03
MAP1LC3B-204ENST00000563720 IGKV3D-7A0A0C4DH55 119 aa8.62□□□□□ -1.03
MAP1LC3B-204ENST00000563720 LCE2BO14633 110 aa8.61□□□□□ -1.03
MAP1LC3B-204ENST00000563720 MT2AP02795 61 aa8.61□□□□□ -1.03
MAP1LC3B-204ENST00000563720 SPINK7P58062 85 aa8.61□□□□□ -1.03
MAP1LC3B-204ENST00000563720 MACF1Q9UPN3 7388 aaKnown RBP8.58□□□□□ -1.04
MAP1LC3B-204ENST00000563720 SYNE2Q8WXH0 6885 aaKnown RBP8.56□□□□□ -1.04
MAP1LC3B-204ENST00000563720 NREPQ16612 68 aa8.56□□□□□ -1.04
MAP1LC3B-204ENST00000563720 PRR15Q8IV56 129 aa8.56□□□□□ -1.04
MAP1LC3B-204ENST00000563720 MT1FP04733 61 aa8.55□□□□□ -1.04
MAP1LC3B-204ENST00000563720 Q6ZVQ6 151 aa8.55□□□□□ -1.04
MAP1LC3B-204ENST00000563720 MTURNQ8N3F0 131 aa8.55□□□□□ -1.04
MAP1LC3B-204ENST00000563720 C9orf118A6NHY6 69 aa8.54□□□□□ -1.04
MAP1LC3B-204ENST00000563720 KRTAP10-10P60014 251 aa8.53□□□□□ -1.04
MAP1LC3B-204ENST00000563720 KRTAP9-3Q9BYQ3 159 aa8.53□□□□□ -1.04
MAP1LC3B-204ENST00000563720 H3BT86 120 aa8.52□□□□□ -1.05
MAP1LC3B-204ENST00000563720 TAX1BP3O14907 124 aa8.52□□□□□ -1.05
MAP1LC3B-204ENST00000563720 LINC00846Q9NV44 126 aa8.52□□□□□ -1.05
MAP1LC3B-204ENST00000563720 MMP24-AS1A0A0U1RRL7 71 aa8.51□□□□□ -1.05
MAP1LC3B-204ENST00000563720 COL5A1-AS1Q5SY13 56 aa8.51□□□□□ -1.05
MAP1LC3B-204ENST00000563720 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
MAP1LC3B-204ENST00000563720 TMEM254Q8TBM7 123 aa8.49□□□□□ -1.05
MAP1LC3B-204ENST00000563720 WFDC13Q8IUB5 93 aa8.48□□□□□ -1.05
MAP1LC3B-204ENST00000563720 MRPL34Q9BQ48 92 aaKnown RBP8.48□□□□□ -1.05
MAP1LC3B-204ENST00000563720 K7EQZ3 153 aa8.47□□□□□ -1.05
MAP1LC3B-204ENST00000563720 hDV103S1A0JD37 113 aa8.43□□□□□ -1.06
MAP1LC3B-204ENST00000563720 BPY2O14599 106 aa8.4□□□□□ -1.06
MAP1LC3B-204ENST00000563720 KRTAP19-6Q3LI70 58 aa8.4□□□□□ -1.06
MAP1LC3B-204ENST00000563720 A0A1B0GV90 55 aa8.39□□□□□ -1.07
MAP1LC3B-204ENST00000563720 NDUFS5O43920 106 aa8.38□□□□□ -1.07
MAP1LC3B-204ENST00000563720 SPCS1Q9Y6A9 102 aa8.37□□□□□ -1.07
MAP1LC3B-204ENST00000563720 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
MAP1LC3B-204ENST00000563720 KRTAP6-3Q3LI67 103 aa8.34□□□□□ -1.07
MAP1LC3B-204ENST00000563720 Q8N9L7 120 aa8.34□□□□□ -1.07
MAP1LC3B-204ENST00000563720 Q5W150 140 aa8.33□□□□□ -1.08
MAP1LC3B-204ENST00000563720 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
MAP1LC3B-204ENST00000563720 IGKV2-30P06310 120 aa8.3□□□□□ -1.08
MAP1LC3B-204ENST00000563720 H1FX-AS1Q4G0G2 97 aa8.3□□□□□ -1.08
MAP1LC3B-204ENST00000563720 CASC2Q6XLA1 102 aa8.3□□□□□ -1.08
MAP1LC3B-204ENST00000563720 PRO0461Q9UI25 63 aa8.29□□□□□ -1.08
MAP1LC3B-204ENST00000563720 C7orf65Q6ZTY9 151 aa8.28□□□□□ -1.08
MAP1LC3B-204ENST00000563720 K7EP34 96 aa8.27□□□□□ -1.09
MAP1LC3B-204ENST00000563720 HCG22E2RYF7 251 aa8.26□□□□□ -1.09
MAP1LC3B-204ENST00000563720 GTF2H5Q6ZYL4 71 aa8.24□□□□□ -1.09
MAP1LC3B-204ENST00000563720 CXCL6P80162 114 aa8.21□□□□□ -1.1
MAP1LC3B-204ENST00000563720 UBL5Q9BZL1 73 aa8.21□□□□□ -1.1
MAP1LC3B-204ENST00000563720 C4orf26Q17RF5 130 aa8.17□□□□□ -1.1
MAP1LC3B-204ENST00000563720 F8W1H4 67 aa8.1□□□□□ -1.11
MAP1LC3B-204ENST00000563720 NEBP20929 6669 aa8.1□□□□□ -1.11
MAP1LC3B-204ENST00000563720 KRTAP3-1Q9BYR8 98 aa8.08□□□□□ -1.12
MAP1LC3B-204ENST00000563720 ETDBQ3ZM63 59 aa8.05□□□□□ -1.12
MAP1LC3B-204ENST00000563720 TP53AIP1Q9HCN2 124 aa8.03□□□□□ -1.12
MAP1LC3B-204ENST00000563720 C5orf47Q569G3 176 aa8.02□□□□□ -1.13
MAP1LC3B-204ENST00000563720 C1orf64Q8NEQ6 169 aa8.01□□□□□ -1.13
MAP1LC3B-204ENST00000563720 MUC12Q9UKN1 5478 aa7.99□□□□□ -1.13
MAP1LC3B-204ENST00000563720 KRTAP20-1Q3LI63 56 aa7.99□□□□□ -1.13
MAP1LC3B-204ENST00000563720 S4R3F8 94 aa7.99□□□□□ -1.13
MAP1LC3B-204ENST00000563720 LCA10Q71F78 164 aa7.95□□□□□ -1.14
MAP1LC3B-204ENST00000563720 CSAG1Q6PB30 78 aa7.93□□□□□ -1.14
MAP1LC3B-204ENST00000563720 FAM236AA0A1B0GUQ0 79 aa7.92□□□□□ -1.14
MAP1LC3B-204ENST00000563720 FAM236BA0A1B0GV22 79 aa7.92□□□□□ -1.14
MAP1LC3B-204ENST00000563720 CYP4F30PQ9H0H9 118 aa7.9□□□□□ -1.14
MAP1LC3B-204ENST00000563720 A6NN06 94 aa7.86□□□□□ -1.15
MAP1LC3B-204ENST00000563720 ACYP1P07311 99 aa7.86□□□□□ -1.15
MAP1LC3B-204ENST00000563720 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
MAP1LC3B-204ENST00000563720 TRAV22A0A0B4J277 110 aa7.85□□□□□ -1.15
MAP1LC3B-204ENST00000563720 FAM240AA0A1B0GVK7 77 aa7.83□□□□□ -1.16
MAP1LC3B-204ENST00000563720 MT1BP07438 61 aa7.83□□□□□ -1.16
MAP1LC3B-204ENST00000563720 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
MAP1LC3B-204ENST00000563720 LOC101927531A0A1B0GV80 90 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms