RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 UBR4Q5T4S7 5183 aa8.13□□□□□ -1.11
COMMD4-205ENST00000562310 HCG22E2RYF7 251 aa8.12□□□□□ -1.11
COMMD4-205ENST00000562310 ATOX1O00244 68 aa8.12□□□□□ -1.11
COMMD4-205ENST00000562310 C8orf87E5RJ46 101 aa8.1□□□□□ -1.11
COMMD4-205ENST00000562310 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
COMMD4-205ENST00000562310 IGHV6-1A0A0B4J1U7 121 aa8.09□□□□□ -1.11
COMMD4-205ENST00000562310 MT1HL1P0DM35 61 aa8.09□□□□□ -1.11
COMMD4-205ENST00000562310 MMP24-AS1A0A0U1RRL7 71 aa8.08□□□□□ -1.12
COMMD4-205ENST00000562310 C8orf17Q9NRJ1 99 aa8.08□□□□□ -1.12
COMMD4-205ENST00000562310 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
COMMD4-205ENST00000562310 KRTAP29-1A8MX34 341 aaPredicted RBP8.07□□□□□ -1.12
COMMD4-205ENST00000562310 CASC2Q6XLA1 102 aa8.07□□□□□ -1.12
COMMD4-205ENST00000562310 SMIM20Q8N5G0 67 aa8.07□□□□□ -1.12
COMMD4-205ENST00000562310 ANAPC13Q9BS18 74 aa8.06□□□□□ -1.12
COMMD4-205ENST00000562310 WFDC13Q8IUB5 93 aa8.05□□□□□ -1.12
COMMD4-205ENST00000562310 hDV103S1A0JD37 113 aa8.04□□□□□ -1.12
COMMD4-205ENST00000562310 TMEM254Q8TBM7 123 aa8.03□□□□□ -1.12
COMMD4-205ENST00000562310 FAT3Q8TDW7 4589 aa8.02□□□□□ -1.13
COMMD4-205ENST00000562310 LINC00313P59037 77 aa8.01□□□□□ -1.13
COMMD4-205ENST00000562310 FP248Q71RG6 208 aaPredicted RBP8.01□□□□□ -1.13
COMMD4-205ENST00000562310 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
COMMD4-205ENST00000562310 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
COMMD4-205ENST00000562310 SERP2Q8N6R1 65 aa7.99□□□□□ -1.13
COMMD4-205ENST00000562310 PCP4P48539 62 aa7.98□□□□□ -1.13
COMMD4-205ENST00000562310 MRPL34Q9BQ48 92 aaKnown RBP7.98□□□□□ -1.13
COMMD4-205ENST00000562310 TNXBP22105 4242 aa7.98□□□□□ -1.13
COMMD4-205ENST00000562310 NOTCH2NLQ7Z3S9 236 aa7.97□□□□□ -1.13
COMMD4-205ENST00000562310 RETNLBQ9BQ08 111 aa7.97□□□□□ -1.13
COMMD4-205ENST00000562310 OCR1Q9BZK8 76 aa7.97□□□□□ -1.13
COMMD4-205ENST00000562310 J3QL48 77 aa7.94□□□□□ -1.14
COMMD4-205ENST00000562310 COX7CP15954 63 aa7.94□□□□□ -1.14
COMMD4-205ENST00000562310 TP53AIP1Q9HCN2 124 aa7.94□□□□□ -1.14
COMMD4-205ENST00000562310 UQCRQO14949 82 aa7.93□□□□□ -1.14
COMMD4-205ENST00000562310 KRTAP16-1A8MUX0 517 aa7.92□□□□□ -1.14
COMMD4-205ENST00000562310 MYCBP2O75592 4640 aa7.92□□□□□ -1.14
COMMD4-205ENST00000562310 NDUFS5O43920 106 aa7.9□□□□□ -1.14
COMMD4-205ENST00000562310 Q8N9P0 234 aaPredicted RBP7.9□□□□□ -1.14
COMMD4-205ENST00000562310 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
COMMD4-205ENST00000562310 C5orf47Q569G3 176 aa7.87□□□□□ -1.15
COMMD4-205ENST00000562310 C9orf92A6NGG3 77 aa7.85□□□□□ -1.15
COMMD4-205ENST00000562310 TRAV22A0A0B4J277 110 aa7.84□□□□□ -1.15
COMMD4-205ENST00000562310 MP68P56378 58 aa7.84□□□□□ -1.15
COMMD4-205ENST00000562310 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
COMMD4-205ENST00000562310 PRR4Q16378 134 aa7.83□□□□□ -1.16
COMMD4-205ENST00000562310 H0Y9P7 68 aa7.82□□□□□ -1.16
COMMD4-205ENST00000562310 H3BPC8 53 aa7.82□□□□□ -1.16
COMMD4-205ENST00000562310 C20orf166-AS1Q96NR2 134 aa7.82□□□□□ -1.16
COMMD4-205ENST00000562310 A8MUU9 505 aa7.81□□□□□ -1.16
COMMD4-205ENST00000562310 KRTAP13-3Q3SY46 172 aa7.81□□□□□ -1.16
COMMD4-205ENST00000562310 C20orf197Q8N268 126 aa7.81□□□□□ -1.16
COMMD4-205ENST00000562310 KLKP1Q107X0 134 aa7.79□□□□□ -1.16
COMMD4-205ENST00000562310 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
COMMD4-205ENST00000562310 A0A0U1RQV1 116 aa7.78□□□□□ -1.16
COMMD4-205ENST00000562310 Q75L30 129 aa7.78□□□□□ -1.16
COMMD4-205ENST00000562310 NDUFC1O43677 76 aa7.74□□□□□ -1.17
COMMD4-205ENST00000562310 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
COMMD4-205ENST00000562310 LINC00208Q96KT6 92 aa7.74□□□□□ -1.17
COMMD4-205ENST00000562310 HMCN2Q8NDA2 5059 aa7.74□□□□□ -1.17
COMMD4-205ENST00000562310 LOC101927531A0A1B0GV80 90 aa7.73□□□□□ -1.17
COMMD4-205ENST00000562310 XP32Q5T750 250 aa7.73□□□□□ -1.17
COMMD4-205ENST00000562310 Q5W150 140 aa7.73□□□□□ -1.17
COMMD4-205ENST00000562310 SNURFQ9Y675 71 aa7.73□□□□□ -1.17
COMMD4-205ENST00000562310 C1orf64Q8NEQ6 169 aa7.72□□□□□ -1.17
COMMD4-205ENST00000562310 RPL37P61927 97 aaKnown RBP7.7□□□□□ -1.18
COMMD4-205ENST00000562310 ATP11AUNQ6ZP68 121 aa7.66□□□□□ -1.18
COMMD4-205ENST00000562310 CYSTM1Q9H1C7 97 aa7.66□□□□□ -1.18
COMMD4-205ENST00000562310 IGKV2-30P06310 120 aa7.65□□□□□ -1.18
COMMD4-205ENST00000562310 H7BZZ5 65 aa7.64□□□□□ -1.19
COMMD4-205ENST00000562310 TMEM258P61165 79 aa7.63□□□□□ -1.19
COMMD4-205ENST00000562310 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
COMMD4-205ENST00000562310 CYP4F30PQ9H0H9 118 aa7.62□□□□□ -1.19
COMMD4-205ENST00000562310 IGKV2D-30A0A075B6S6 120 aa7.6□□□□□ -1.19
COMMD4-205ENST00000562310 ATP5EP56381 51 aaPredicted RBP7.58□□□□□ -1.2
COMMD4-205ENST00000562310 PCOTHQ58A44 107 aa7.56□□□□□ -1.2
COMMD4-205ENST00000562310 SPANXA2-OT1Q8N9U9 137 aa7.56□□□□□ -1.2
COMMD4-205ENST00000562310 FAM236DA0A1B0GTK5 79 aa7.55□□□□□ -1.2
COMMD4-205ENST00000562310 FAM236CP0DP71 79 aa7.55□□□□□ -1.2
COMMD4-205ENST00000562310 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
COMMD4-205ENST00000562310 SPINK7P58062 85 aa7.52□□□□□ -1.21
COMMD4-205ENST00000562310 HRES1P13985 223 aa7.49□□□□□ -1.21
COMMD4-205ENST00000562310 RNF213Q63HN8 5207 aa7.49□□□□□ -1.21
COMMD4-205ENST00000562310 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
COMMD4-205ENST00000562310 A8MUN3 132 aa7.39□□□□□ -1.23
COMMD4-205ENST00000562310 LPAP08519 4548 aa7.39□□□□□ -1.23
COMMD4-205ENST00000562310 LRP2P98164 4655 aa7.38□□□□□ -1.23
COMMD4-205ENST00000562310 C4orf26Q17RF5 130 aa7.38□□□□□ -1.23
COMMD4-205ENST00000562310 SERP1Q9Y6X1 66 aa7.38□□□□□ -1.23
COMMD4-205ENST00000562310 KRTAP9-2Q9BYQ4 174 aa7.37□□□□□ -1.23
COMMD4-205ENST00000562310 ACYP2P14621 99 aa7.35□□□□□ -1.23
COMMD4-205ENST00000562310 COX6B2Q6YFQ2 88 aa7.35□□□□□ -1.23
COMMD4-205ENST00000562310 RPS28P62857 69 aaKnown RBP7.33□□□□□ -1.24
COMMD4-205ENST00000562310 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
COMMD4-205ENST00000562310 RBM12B-AS1Q9P1G2 102 aa7.31□□□□□ -1.24
COMMD4-205ENST00000562310 COA5Q86WW8 74 aa7.3□□□□□ -1.24
COMMD4-205ENST00000562310 MPLKIPQ8TAP9 179 aa7.3□□□□□ -1.24
COMMD4-205ENST00000562310 MUC17Q685J3 4493 aa7.27□□□□□ -1.25
COMMD4-205ENST00000562310 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
COMMD4-205ENST00000562310 KRTAP3-1Q9BYR8 98 aa7.25□□□□□ -1.25
COMMD4-205ENST00000562310 CHKB-CPT1BH3BT56 60 aa7.24□□□□□ -1.25
COMMD4-205ENST00000562310 H1FX-AS1Q4G0G2 97 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms