RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 A8MU10 97 aa7.47□□□□□ -1.21
CSPG4P11-201ENST00000560634 ITPR1Q14643 2758 aa7.47□□□□□ -1.21
CSPG4P11-201ENST00000560634 KRTAP11-1Q8IUC1 163 aa7.46□□□□□ -1.22
CSPG4P11-201ENST00000560634 ITPR2Q14571 2701 aa7.45□□□□□ -1.22
CSPG4P11-201ENST00000560634 MUC3AQ02505 3323 aa7.45□□□□□ -1.22
CSPG4P11-201ENST00000560634 Q6ZRN7 208 aaPredicted RBP7.45□□□□□ -1.22
CSPG4P11-201ENST00000560634 LRBAP50851 2863 aa7.44□□□□□ -1.22
CSPG4P11-201ENST00000560634 WDFY3Q8IZQ1 3526 aa7.43□□□□□ -1.22
CSPG4P11-201ENST00000560634 CFAP47Q6ZTR5 3102 aa7.43□□□□□ -1.22
CSPG4P11-201ENST00000560634 ATMQ13315 3056 aa7.43□□□□□ -1.22
CSPG4P11-201ENST00000560634 KRTAP13-1Q8IUC0 172 aa7.42□□□□□ -1.22
CSPG4P11-201ENST00000560634 KRTAP7-1Q8IUC3 87 aa7.42□□□□□ -1.22
CSPG4P11-201ENST00000560634 NDUFAF8A1L188 74 aa7.41□□□□□ -1.22
CSPG4P11-201ENST00000560634 DMDP11532 3685 aa7.41□□□□□ -1.22
CSPG4P11-201ENST00000560634 COL12A1Q99715 3063 aa7.4□□□□□ -1.22
CSPG4P11-201ENST00000560634 C20orf166-AS1Q96NR2 134 aa7.39□□□□□ -1.23
CSPG4P11-201ENST00000560634 ZZEF1O43149 2961 aa7.39□□□□□ -1.23
CSPG4P11-201ENST00000560634 KRTAP13-2Q52LG2 175 aa7.39□□□□□ -1.23
CSPG4P11-201ENST00000560634 DMXL2Q8TDJ6 3036 aa7.36□□□□□ -1.23
CSPG4P11-201ENST00000560634 HIVEP1P15822 2718 aa7.35□□□□□ -1.23
CSPG4P11-201ENST00000560634 LOC400499M0QZD8 3231 aa7.34□□□□□ -1.23
CSPG4P11-201ENST00000560634 TNP1P09430 55 aa7.33□□□□□ -1.24
CSPG4P11-201ENST00000560634 DMXL1Q9Y485 3027 aa7.3□□□□□ -1.24
CSPG4P11-201ENST00000560634 UTP20O75691 2785 aaKnown RBP7.29□□□□□ -1.24
CSPG4P11-201ENST00000560634 ASH1LQ9NR48 2969 aaKnown RBP7.27□□□□□ -1.25
CSPG4P11-201ENST00000560634 APCP25054 2843 aa7.24□□□□□ -1.25
CSPG4P11-201ENST00000560634 KMT2BQ9UMN6 2715 aaPredicted RBP7.23□□□□□ -1.25
CSPG4P11-201ENST00000560634 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
CSPG4P11-201ENST00000560634 DCHS1Q96JQ0 3298 aa7.22□□□□□ -1.25
CSPG4P11-201ENST00000560634 TENM4Q6N022 2769 aa7.21□□□□□ -1.26
CSPG4P11-201ENST00000560634 NIPBLQ6KC79 2804 aaeCLIP7.2□□□□□ -1.26
CSPG4P11-201ENST00000560634 ASPMQ8IZT6 3477 aa7.18□□□□□ -1.26
CSPG4P11-201ENST00000560634 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
CSPG4P11-201ENST00000560634 LAMA5O15230 3695 aa7.16□□□□□ -1.26
CSPG4P11-201ENST00000560634 ZFHX4Q86UP3 3567 aa7.14□□□□□ -1.27
CSPG4P11-201ENST00000560634 ZANQ9Y493 2812 aa7.13□□□□□ -1.27
CSPG4P11-201ENST00000560634 KRTAP21-3Q3LHN1 58 aa7.1□□□□□ -1.27
CSPG4P11-201ENST00000560634 CELSR2Q9HCU4 2923 aa7.09□□□□□ -1.27
CSPG4P11-201ENST00000560634 HRNRQ86YZ3 2850 aaPredicted RBP7.07□□□□□ -1.28
CSPG4P11-201ENST00000560634 CRYBG3Q68DQ2 2970 aa7.05□□□□□ -1.28
CSPG4P11-201ENST00000560634 CSMD1Q96PZ7 3565 aa7.03□□□□□ -1.28
CSPG4P11-201ENST00000560634 P0C880 135 aa7.02□□□□□ -1.29
CSPG4P11-201ENST00000560634 DCHS2Q6V1P9 2916 aa7.01□□□□□ -1.29
CSPG4P11-201ENST00000560634 KRTAP1-4P0C5Y4 121 aa7□□□□□ -1.29
CSPG4P11-201ENST00000560634 XP32Q5T750 250 aa7□□□□□ -1.29
CSPG4P11-201ENST00000560634 RELNP78509 3460 aa7□□□□□ -1.29
CSPG4P11-201ENST00000560634 SMG1Q96Q15 3661 aaKnown RBP6.99□□□□□ -1.29
CSPG4P11-201ENST00000560634 KRTAP10-8P60410 259 aa6.99□□□□□ -1.29
CSPG4P11-201ENST00000560634 H0YAA0 97 aa6.98□□□□□ -1.29
CSPG4P11-201ENST00000560634 TENM3Q9P273 2699 aa6.96□□□□□ -1.29
CSPG4P11-201ENST00000560634 FBN2P35556 2912 aa6.95□□□□□ -1.3
CSPG4P11-201ENST00000560634 NF1P21359 2839 aa6.93□□□□□ -1.3
CSPG4P11-201ENST00000560634 TPRXLQ17RH7 258 aa6.89□□□□□ -1.31
CSPG4P11-201ENST00000560634 SPENQ96T58 3664 aaKnown RBP6.87□□□□□ -1.31
CSPG4P11-201ENST00000560634 BSNQ9UPA5 3926 aa6.81□□□□□ -1.32
CSPG4P11-201ENST00000560634 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
CSPG4P11-201ENST00000560634 A0A1B0GVY2 172 aa6.8□□□□□ -1.32
CSPG4P11-201ENST00000560634 SVEP1Q4LDE5 3571 aa6.8□□□□□ -1.32
CSPG4P11-201ENST00000560634 MXRA5Q9NR99 2828 aa6.78□□□□□ -1.32
CSPG4P11-201ENST00000560634 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
CSPG4P11-201ENST00000560634 KRTAP13-3Q3SY46 172 aa6.75□□□□□ -1.33
CSPG4P11-201ENST00000560634 TENM1Q9UKZ4 2725 aa6.74□□□□□ -1.33
CSPG4P11-201ENST00000560634 CELSR1Q9NYQ6 3014 aa6.72□□□□□ -1.33
CSPG4P11-201ENST00000560634 CUBNO60494 3623 aa6.72□□□□□ -1.33
CSPG4P11-201ENST00000560634 TGP01266 2768 aa6.66□□□□□ -1.34
CSPG4P11-201ENST00000560634 PKD1L1Q8TDX9 2849 aa6.63□□□□□ -1.35
CSPG4P11-201ENST00000560634 TENM2Q9NT68 2774 aa6.62□□□□□ -1.35
CSPG4P11-201ENST00000560634 PDZD2O15018 2839 aa6.57□□□□□ -1.36
CSPG4P11-201ENST00000560634 KRTAP13-4Q3LI77 160 aa6.53□□□□□ -1.36
CSPG4P11-201ENST00000560634 KRTAP12-2P59991 146 aa6.52□□□□□ -1.37
CSPG4P11-201ENST00000560634 CSMD2Q7Z408 3487 aa6.48□□□□□ -1.37
CSPG4P11-201ENST00000560634 VPS13CQ709C8 3753 aa6.46□□□□□ -1.37
CSPG4P11-201ENST00000560634 KRTAP12-1P59990 96 aa6.45□□□□□ -1.38
CSPG4P11-201ENST00000560634 OTOGQ6ZRI0 2925 aa6.44□□□□□ -1.38
CSPG4P11-201ENST00000560634 VWFP04275 2813 aa6.41□□□□□ -1.38
CSPG4P11-201ENST00000560634 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.39
CSPG4P11-201ENST00000560634 FBN1P35555 2871 aaKnown RBP6.39□□□□□ -1.39
CSPG4P11-201ENST00000560634 ZFHX3Q15911 3703 aa6.39□□□□□ -1.39
CSPG4P11-201ENST00000560634 NBPF19A0A087WUL8 3843 aa6.37□□□□□ -1.39
CSPG4P11-201ENST00000560634 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
CSPG4P11-201ENST00000560634 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
CSPG4P11-201ENST00000560634 ANK3Q12955 4377 aaKnown RBP6.24□□□□□ -1.41
CSPG4P11-201ENST00000560634 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
CSPG4P11-201ENST00000560634 INE1O15225 51 aa6.2□□□□□ -1.42
CSPG4P11-201ENST00000560634 ZNF469Q96JG9 3925 aaPredicted RBP6.19□□□□□ -1.42
CSPG4P11-201ENST00000560634 AKAP9Q99996 3911 aa6.12□□□□□ -1.43
CSPG4P11-201ENST00000560634 TRRAPQ9Y4A5 3859 aa6.09□□□□□ -1.44
CSPG4P11-201ENST00000560634 FBN3Q75N90 2809 aa6.04□□□□□ -1.44
CSPG4P11-201ENST00000560634 KRTAP3-2Q9BYR7 98 aa5.95□□□□□ -1.46
CSPG4P11-201ENST00000560634 MEGF8Q7Z7M0 2845 aa5.94□□□□□ -1.46
CSPG4P11-201ENST00000560634 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
CSPG4P11-201ENST00000560634 COL7A1Q02388 2944 aa5.9□□□□□ -1.46
CSPG4P11-201ENST00000560634 KRTAP3-3Q9BYR6 98 aa5.9□□□□□ -1.47
CSPG4P11-201ENST00000560634 MT1HL1P0DM35 61 aa5.88□□□□□ -1.47
CSPG4P11-201ENST00000560634 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
CSPG4P11-201ENST00000560634 CSMD3Q7Z407 3707 aa5.84□□□□□ -1.47
CSPG4P11-201ENST00000560634 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
CSPG4P11-201ENST00000560634 HUWE1Q7Z6Z7 4374 aaKnown RBP5.78□□□□□ -1.48
CSPG4P11-201ENST00000560634 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
CSPG4P11-201ENST00000560634 KRTAP10-4P60372 401 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms