RNA–Protein interactions for RNA: ENST00000560475.1

TRIP4-209, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-209ENST00000560475 PRRC2CQ9Y520 2896 aaKnown RBP0.9□□□□□ -2.27
TRIP4-209ENST00000560475 APC2O95996 2303 aa0.89□□□□□ -2.27
TRIP4-209ENST00000560475 COL6A5A8TX70 2615 aa0.89□□□□□ -2.27
TRIP4-209ENST00000560475 SRRM2Q9UQ35 2752 aaKnown RBP0.89□□□□□ -2.27
TRIP4-209ENST00000560475 CEP290O15078 2479 aa0.89□□□□□ -2.27
TRIP4-209ENST00000560475 CCDC168Q8NDH2 2452 aa0.89□□□□□ -2.27
TRIP4-209ENST00000560475 M0R2T5 61 aa0.89□□□□□ -2.27
TRIP4-209ENST00000560475 EP300Q09472 2414 aaPredicted RBP0.89□□□□□ -2.27
TRIP4-209ENST00000560475 NOTCH1P46531 2555 aa0.89□□□□□ -2.27
TRIP4-209ENST00000560475 CRYBG3Q68DQ2 2970 aa0.88□□□□□ -2.27
TRIP4-209ENST00000560475 UBR5O95071 2799 aaPredicted RBP0.88□□□□□ -2.27
TRIP4-209ENST00000560475 ABCA12Q86UK0 2595 aa0.88□□□□□ -2.27
TRIP4-209ENST00000560475 FBN2P35556 2912 aa0.87□□□□□ -2.27
TRIP4-209ENST00000560475 TNRC18O15417 2968 aaPredicted RBP0.87□□□□□ -2.27
TRIP4-209ENST00000560475 CREBBPQ92793 2442 aa0.87□□□□□ -2.27
TRIP4-209ENST00000560475 NBASA2RRP1 2371 aa0.86□□□□□ -2.27
TRIP4-209ENST00000560475 DMBT1Q9UGM3 2413 aaPredicted RBP0.86□□□□□ -2.27
TRIP4-209ENST00000560475 VWFP04275 2813 aa0.86□□□□□ -2.27
TRIP4-209ENST00000560475 TTC28Q96AY4 2481 aa0.85□□□□□ -2.27
TRIP4-209ENST00000560475 CELSR1Q9NYQ6 3014 aa0.85□□□□□ -2.27
TRIP4-209ENST00000560475 HECTD1Q9ULT8 2610 aa0.85□□□□□ -2.27
TRIP4-209ENST00000560475 NAV2Q8IVL1 2488 aa0.84□□□□□ -2.27
TRIP4-209ENST00000560475 ZNF469Q96JG9 3925 aaPredicted RBP0.84□□□□□ -2.27
TRIP4-209ENST00000560475 AKAP13Q12802 2813 aa0.84□□□□□ -2.28
TRIP4-209ENST00000560475 MEGF8Q7Z7M0 2845 aa0.84□□□□□ -2.28
TRIP4-209ENST00000560475 FRYLO94915 3013 aa0.84□□□□□ -2.28
TRIP4-209ENST00000560475 ANKHD1Q8IWZ3 2542 aaKnown RBP0.84□□□□□ -2.28
TRIP4-209ENST00000560475 ZZEF1O43149 2961 aa0.84□□□□□ -2.28
TRIP4-209ENST00000560475 PRUNE2Q8WUY3 3088 aa0.83□□□□□ -2.28
TRIP4-209ENST00000560475 MAP1AP78559 2803 aaPredicted RBP0.83□□□□□ -2.28
TRIP4-209ENST00000560475 ZNF292O60281 2723 aa0.83□□□□□ -2.28
TRIP4-209ENST00000560475 SRCAPQ6ZRS2 3230 aa0.83□□□□□ -2.28
TRIP4-209ENST00000560475 NBEAQ8NFP9 2946 aa0.82□□□□□ -2.28
TRIP4-209ENST00000560475 ITPR1Q14643 2758 aa0.82□□□□□ -2.28
TRIP4-209ENST00000560475 TENM3Q9P273 2699 aa0.82□□□□□ -2.28
TRIP4-209ENST00000560475 RANBP2P49792 3224 aaKnown RBP0.82□□□□□ -2.28
TRIP4-209ENST00000560475 CFAP54Q96N23 3096 aa0.81□□□□□ -2.28
TRIP4-209ENST00000560475 FAM186AA6NE01 2351 aa0.81□□□□□ -2.28
TRIP4-209ENST00000560475 NCOR2Q9Y618 2525 aa0.81□□□□□ -2.28
TRIP4-209ENST00000560475 PTPN13Q12923 2485 aa0.8□□□□□ -2.28
TRIP4-209ENST00000560475 VPS13AQ96RL7 3174 aa0.8□□□□□ -2.28
TRIP4-209ENST00000560475 SETD2Q9BYW2 2564 aaPredicted RBP0.8□□□□□ -2.28
TRIP4-209ENST00000560475 KRTAP2-3P0C7H8 128 aa0.8□□□□□ -2.28
TRIP4-209ENST00000560475 KRTAP2-4Q9BYR9 128 aa0.8□□□□□ -2.28
TRIP4-209ENST00000560475 KRTAP2-1Q9BYU5 128 aa0.8□□□□□ -2.28
TRIP4-209ENST00000560475 HIVEP3Q5T1R4 2406 aa0.8□□□□□ -2.28
TRIP4-209ENST00000560475 BOD1L1Q8NFC6 3051 aa0.8□□□□□ -2.28
TRIP4-209ENST00000560475 SPG11Q96JI7 2443 aa0.79□□□□□ -2.28
TRIP4-209ENST00000560475 SMR3AQ99954 134 aa0.79□□□□□ -2.28
TRIP4-209ENST00000560475 COL7A1Q02388 2944 aa0.79□□□□□ -2.28
TRIP4-209ENST00000560475 SONP18583 2426 aaKnown RBP0.79□□□□□ -2.28
TRIP4-209ENST00000560475 TRIOO75962 3097 aa0.79□□□□□ -2.28
TRIP4-209ENST00000560475 LRRK2Q5S007 2527 aa0.79□□□□□ -2.28
TRIP4-209ENST00000560475 WDFY4Q6ZS81 3184 aa0.79□□□□□ -2.28
TRIP4-209ENST00000560475 CACNA1AO00555 2505 aa0.78□□□□□ -2.28
TRIP4-209ENST00000560475 ITPR3Q14573 2671 aa0.78□□□□□ -2.28
TRIP4-209ENST00000560475 KRTAP8-1Q8IUC2 63 aa0.78□□□□□ -2.28
TRIP4-209ENST00000560475 C5orf42Q9H799 3197 aa0.78□□□□□ -2.28
TRIP4-209ENST00000560475 RIF1Q5UIP0 2472 aaKnown RBP0.78□□□□□ -2.28
TRIP4-209ENST00000560475 USP9YO00507 2555 aaPredicted RBP0.78□□□□□ -2.28
TRIP4-209ENST00000560475 POLQO75417 2590 aa0.78□□□□□ -2.28
TRIP4-209ENST00000560475 USP24Q9UPU5 2620 aa0.78□□□□□ -2.29
TRIP4-209ENST00000560475 NIPBLQ6KC79 2804 aaeCLIP0.78□□□□□ -2.29
TRIP4-209ENST00000560475 GOLGB1Q14789 3259 aaKnown RBP0.77□□□□□ -2.29
TRIP4-209ENST00000560475 PIEZO1Q92508 2521 aa0.77□□□□□ -2.29
TRIP4-209ENST00000560475 FRYQ5TBA9 3013 aa0.77□□□□□ -2.29
TRIP4-209ENST00000560475 DMXL1Q9Y485 3027 aa0.77□□□□□ -2.29
TRIP4-209ENST00000560475 HTTP42858 3142 aa0.77□□□□□ -2.29
TRIP4-209ENST00000560475 TENM4Q6N022 2769 aa0.77□□□□□ -2.29
TRIP4-209ENST00000560475 CHD9Q3L8U1 2897 aa0.77□□□□□ -2.29
TRIP4-209ENST00000560475 LRBAP50851 2863 aa0.76□□□□□ -2.29
TRIP4-209ENST00000560475 NF1P21359 2839 aa0.76□□□□□ -2.29
TRIP4-209ENST00000560475 CFAP47Q6ZTR5 3102 aa0.76□□□□□ -2.29
TRIP4-209ENST00000560475 DNAH12Q6ZR08 3092 aa0.76□□□□□ -2.29
TRIP4-209ENST00000560475 MKI67P46013 3256 aaKnown RBP0.76□□□□□ -2.29
TRIP4-209ENST00000560475 COL12A1Q99715 3063 aa0.75□□□□□ -2.29
TRIP4-209ENST00000560475 TGP01266 2768 aa0.75□□□□□ -2.29
TRIP4-209ENST00000560475 BDP1A6H8Y1 2624 aa0.75□□□□□ -2.29
TRIP4-209ENST00000560475 ATRQ13535 2644 aa0.75□□□□□ -2.29
TRIP4-209ENST00000560475 EPG5Q9HCE0 2579 aa0.75□□□□□ -2.29
TRIP4-209ENST00000560475 ACANP16112 2415 aa0.75□□□□□ -2.29
TRIP4-209ENST00000560475 VPS13DQ5THJ4 4388 aa0.74□□□□□ -2.29
TRIP4-209ENST00000560475 DCHS2Q6V1P9 2916 aa0.74□□□□□ -2.29
TRIP4-209ENST00000560475 SZT2Q5T011 3432 aa0.74□□□□□ -2.29
TRIP4-209ENST00000560475 CFAP46Q8IYW2 2715 aa0.74□□□□□ -2.29
TRIP4-209ENST00000560475 ATMQ13315 3056 aa0.74□□□□□ -2.29
TRIP4-209ENST00000560475 PDZD2O15018 2839 aa0.74□□□□□ -2.29
TRIP4-209ENST00000560475 ZFHX4Q86UP3 3567 aa0.73□□□□□ -2.29
TRIP4-209ENST00000560475 CENPEQ02224 2701 aa0.73□□□□□ -2.29
TRIP4-209ENST00000560475 SETXQ7Z333 2677 aaKnown RBP0.73□□□□□ -2.29
TRIP4-209ENST00000560475 GCN1Q92616 2671 aaKnown RBP0.73□□□□□ -2.29
TRIP4-209ENST00000560475 SPEGQ15772 3267 aa0.73□□□□□ -2.29
TRIP4-209ENST00000560475 APCP25054 2843 aa0.73□□□□□ -2.29
TRIP4-209ENST00000560475 KRTAP19-3Q7Z4W3 81 aa0.73□□□□□ -2.29
TRIP4-209ENST00000560475 UTRNP46939 3433 aa0.73□□□□□ -2.29
TRIP4-209ENST00000560475 KALRNO60229 2985 aa0.72□□□□□ -2.29
TRIP4-209ENST00000560475 MTORP42345 2549 aa0.72□□□□□ -2.29
TRIP4-209ENST00000560475 AKAP9Q99996 3911 aa0.72□□□□□ -2.29
TRIP4-209ENST00000560475 DCHS1Q96JQ0 3298 aa0.72□□□□□ -2.29
TRIP4-209ENST00000560475 PRM1P04553 51 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms