RNA–Protein interactions for RNA: ENST00000560475.1

TRIP4-209, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-209ENST00000560475 AEBP2Q6ZN18 517 aaPredicted RBP28.26■■■□□ 2.11
TRIP4-209ENST00000560475 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
TRIP4-209ENST00000560475 SENP3Q9H4L4 574 aaPredicted RBP24■■□□□ 1.43
TRIP4-209ENST00000560475 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
TRIP4-209ENST00000560475 FOXD1Q16676 465 aa22.39■■□□□ 1.17
TRIP4-209ENST00000560475 PLPPR3Q6T4P5 718 aa21.72■■□□□ 1.07
TRIP4-209ENST00000560475 PPP6R1Q9UPN7 881 aa21.17■□□□□ 0.98
TRIP4-209ENST00000560475 ADRA2BP18089 450 aa21.12■□□□□ 0.97
TRIP4-209ENST00000560475 PIAS4Q8N2W9 510 aaPredicted RBP20.98■□□□□ 0.95
TRIP4-209ENST00000560475 MSH5O43196 834 aa20.8■□□□□ 0.92
TRIP4-209ENST00000560475 POTEDQ86YR6 584 aa19.91■□□□□ 0.78
TRIP4-209ENST00000560475 MAPK8IP2Q13387 824 aaPredicted RBP19.34■□□□□ 0.69
TRIP4-209ENST00000560475 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
TRIP4-209ENST00000560475 PPP4R3CPQ6ZMV5 832 aa19.11■□□□□ 0.65
TRIP4-209ENST00000560475 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.64
TRIP4-209ENST00000560475 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
TRIP4-209ENST00000560475 HOXD11P31277 338 aaPredicted RBP18.48■□□□□ 0.55
TRIP4-209ENST00000560475 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
TRIP4-209ENST00000560475 RNF216Q9NWF9 866 aaPredicted RBP18.41■□□□□ 0.54
TRIP4-209ENST00000560475 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
TRIP4-209ENST00000560475 NPM3O75607 178 aaKnown RBP18.18■□□□□ 0.5
TRIP4-209ENST00000560475 KCNA4P22459 653 aa18.08■□□□□ 0.48
TRIP4-209ENST00000560475 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
TRIP4-209ENST00000560475 CACNB1Q02641 598 aaPredicted RBP17.75■□□□□ 0.43
TRIP4-209ENST00000560475 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
TRIP4-209ENST00000560475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
TRIP4-209ENST00000560475 C1QBPQ07021 282 aaKnown RBP17.53■□□□□ 0.4
TRIP4-209ENST00000560475 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
TRIP4-209ENST00000560475 U3KPZ7 1027 aaPredicted RBP17.29■□□□□ 0.36
TRIP4-209ENST00000560475 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
TRIP4-209ENST00000560475 SPINK5Q9NQ38 1064 aaPredicted RBP17■□□□□ 0.31
TRIP4-209ENST00000560475 CAPN15O75808 1086 aa16.95■□□□□ 0.3
TRIP4-209ENST00000560475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.84■□□□□ 0.29
TRIP4-209ENST00000560475 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
TRIP4-209ENST00000560475 APLP2Q06481 763 aa16.78■□□□□ 0.28
TRIP4-209ENST00000560475 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
TRIP4-209ENST00000560475 DSG3P32926 999 aa16.77■□□□□ 0.28
TRIP4-209ENST00000560475 SAMD1Q6SPF0 538 aaPredicted RBP16.77■□□□□ 0.28
TRIP4-209ENST00000560475 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
TRIP4-209ENST00000560475 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
TRIP4-209ENST00000560475 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
TRIP4-209ENST00000560475 ZBTB22O15209 634 aa16.63■□□□□ 0.25
TRIP4-209ENST00000560475 ABCB7O75027 752 aa16.61■□□□□ 0.25
TRIP4-209ENST00000560475 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
TRIP4-209ENST00000560475 POLA2Q14181 598 aa16.36■□□□□ 0.21
TRIP4-209ENST00000560475 ATXN8OSP0DMR3 200 aa16.18■□□□□ 0.18
TRIP4-209ENST00000560475 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
TRIP4-209ENST00000560475 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
TRIP4-209ENST00000560475 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
TRIP4-209ENST00000560475 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
TRIP4-209ENST00000560475 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
TRIP4-209ENST00000560475 FBLN2P98095 1184 aa15.72■□□□□ 0.11
TRIP4-209ENST00000560475 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
TRIP4-209ENST00000560475 AKT1S1Q96B36 256 aa15.66■□□□□ 0.1
TRIP4-209ENST00000560475 POTEHQ6S545 545 aa15.65■□□□□ 0.1
TRIP4-209ENST00000560475 REM2Q8IYK8 340 aaPredicted RBP15.54■□□□□ 0.08
TRIP4-209ENST00000560475 CHRDL2Q6WN34 429 aa15.53■□□□□ 0.08
TRIP4-209ENST00000560475 SPDYE2BA6NHP3 402 aa15.52■□□□□ 0.08
TRIP4-209ENST00000560475 SPDYE6P0CI01 402 aa15.52■□□□□ 0.08
TRIP4-209ENST00000560475 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.08
TRIP4-209ENST00000560475 ZNF692Q9BU19 519 aaPredicted RBP15.42■□□□□ 0.06
TRIP4-209ENST00000560475 PITPNM1O00562 1244 aa15.37■□□□□ 0.05
TRIP4-209ENST00000560475 SSUH2Q9Y2M2 353 aa15.33■□□□□ 0.04
TRIP4-209ENST00000560475 PIP4P2Q8N4L2 257 aa15.24■□□□□ 0.03
TRIP4-209ENST00000560475 CLEC11AQ9Y240 323 aa15.22■□□□□ 0.03
TRIP4-209ENST00000560475 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRIP4-209ENST00000560475 SPDYE1Q8NFV5 336 aaPredicted RBP15.19■□□□□ 0.02
TRIP4-209ENST00000560475 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRIP4-209ENST00000560475 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
TRIP4-209ENST00000560475 PRKAR2AP13861 404 aaKnown RBP14.99□□□□□ -0.01
TRIP4-209ENST00000560475 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
TRIP4-209ENST00000560475 HAX1O00165 279 aa14.92□□□□□ -0.02
TRIP4-209ENST00000560475 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
TRIP4-209ENST00000560475 STAG3Q9UJ98 1225 aa14.79□□□□□ -0.04
TRIP4-209ENST00000560475 SP7Q8TDD2 431 aaPredicted RBP14.78□□□□□ -0.04
TRIP4-209ENST00000560475 EVX2Q03828 476 aa14.77□□□□□ -0.05
TRIP4-209ENST00000560475 PROM2Q8N271 834 aa14.68□□□□□ -0.06
TRIP4-209ENST00000560475 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
TRIP4-209ENST00000560475 FARP1Q9Y4F1 1045 aaPredicted RBP14.67□□□□□ -0.06
TRIP4-209ENST00000560475 CREBZFQ9NS37 354 aa14.65□□□□□ -0.06
TRIP4-209ENST00000560475 FKBP8Q14318 412 aa14.59□□□□□ -0.07
TRIP4-209ENST00000560475 CD44P16070 742 aaKnown RBP14.52□□□□□ -0.09
TRIP4-209ENST00000560475 GABBR2O75899 941 aa14.42□□□□□ -0.1
TRIP4-209ENST00000560475 MNX1P50219 401 aaPredicted RBP14.42□□□□□ -0.1
TRIP4-209ENST00000560475 NPM1P06748 294 aaKnown RBP eCLIP14.38□□□□□ -0.11
TRIP4-209ENST00000560475 ZRANB1Q9UGI0 708 aa14.37□□□□□ -0.11
TRIP4-209ENST00000560475 MIER1Q8N108 512 aa14.36□□□□□ -0.11
TRIP4-209ENST00000560475 PLEKHG5O94827 1062 aa14.28□□□□□ -0.12
TRIP4-209ENST00000560475 PAK3O75914 559 aaPredicted RBP14.27□□□□□ -0.13
TRIP4-209ENST00000560475 PLCD3Q8N3E9 789 aa14.27□□□□□ -0.13
TRIP4-209ENST00000560475 ZNF579Q8NAF0 562 aaKnown RBP14.27□□□□□ -0.13
TRIP4-209ENST00000560475 PHF12Q96QT6 1004 aa14.2□□□□□ -0.14
TRIP4-209ENST00000560475 CLCN6P51797 869 aa14.19□□□□□ -0.14
TRIP4-209ENST00000560475 TSPYL2Q9H2G4 693 aaPredicted RBP14.19□□□□□ -0.14
TRIP4-209ENST00000560475 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
TRIP4-209ENST00000560475 GALR2O43603 387 aaPredicted RBP14.13□□□□□ -0.15
TRIP4-209ENST00000560475 POTEIP0CG38 1075 aa14.12□□□□□ -0.15
TRIP4-209ENST00000560475 RASEFQ8IZ41 740 aa14.1□□□□□ -0.15
TRIP4-209ENST00000560475 DCBLD2Q96PD2 775 aa14.09□□□□□ -0.15
TRIP4-209ENST00000560475 ZBTB47Q9UFB7 747 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms