RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 C4orf48Q5BLP8 95 aa9.48□□□□□ -0.89
TPM1-219ENST00000559397 ATOX1O00244 68 aa9.48□□□□□ -0.89
TPM1-219ENST00000559397 ANAPC13Q9BS18 74 aa9.48□□□□□ -0.89
TPM1-219ENST00000559397 A8MWP4 228 aa9.47□□□□□ -0.89
TPM1-219ENST00000559397 SPINK1P00995 79 aa9.46□□□□□ -0.89
TPM1-219ENST00000559397 PRR15Q8IV56 129 aa9.45□□□□□ -0.9
TPM1-219ENST00000559397 RPS29P62273 56 aaKnown RBP9.43□□□□□ -0.9
TPM1-219ENST00000559397 LIMD2Q9BT23 127 aa9.4□□□□□ -0.9
TPM1-219ENST00000559397 HCG22E2RYF7 251 aa9.39□□□□□ -0.91
TPM1-219ENST00000559397 NDUFB1O75438 58 aa9.39□□□□□ -0.91
TPM1-219ENST00000559397 C1orf195Q5TG92 126 aa9.37□□□□□ -0.91
TPM1-219ENST00000559397 SERP2Q8N6R1 65 aa9.36□□□□□ -0.91
TPM1-219ENST00000559397 HMCN2Q8NDA2 5059 aa9.36□□□□□ -0.91
TPM1-219ENST00000559397 A0A1B0GVX0 72 aa9.36□□□□□ -0.91
TPM1-219ENST00000559397 SMIM20Q8N5G0 67 aa9.36□□□□□ -0.91
TPM1-219ENST00000559397 TRAV7A0A075B6U4 112 aa9.33□□□□□ -0.92
TPM1-219ENST00000559397 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
TPM1-219ENST00000559397 COX7CP15954 63 aa9.33□□□□□ -0.92
TPM1-219ENST00000559397 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
TPM1-219ENST00000559397 OCR1Q9BZK8 76 aa9.32□□□□□ -0.92
TPM1-219ENST00000559397 WFDC13Q8IUB5 93 aa9.31□□□□□ -0.92
TPM1-219ENST00000559397 C8orf17Q9NRJ1 99 aa9.31□□□□□ -0.92
TPM1-219ENST00000559397 UQCRQO14949 82 aa9.3□□□□□ -0.92
TPM1-219ENST00000559397 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
TPM1-219ENST00000559397 IGHV6-1A0A0B4J1U7 121 aa9.29□□□□□ -0.92
TPM1-219ENST00000559397 CCDC179H3BU77 68 aa9.29□□□□□ -0.92
TPM1-219ENST00000559397 hDV103S1A0JD37 113 aa9.26□□□□□ -0.93
TPM1-219ENST00000559397 NOTCH2NLQ7Z3S9 236 aa9.26□□□□□ -0.93
TPM1-219ENST00000559397 LPAP08519 4548 aa9.26□□□□□ -0.93
TPM1-219ENST00000559397 C8orf87E5RJ46 101 aa9.24□□□□□ -0.93
TPM1-219ENST00000559397 PRR4Q16378 134 aa9.23□□□□□ -0.93
TPM1-219ENST00000559397 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
TPM1-219ENST00000559397 TMEM254Q8TBM7 123 aa9.22□□□□□ -0.93
TPM1-219ENST00000559397 IGLV7-46A0A075B6I9 117 aa9.19□□□□□ -0.94
TPM1-219ENST00000559397 MRPL34Q9BQ48 92 aaKnown RBP9.19□□□□□ -0.94
TPM1-219ENST00000559397 LINC00313P59037 77 aa9.18□□□□□ -0.94
TPM1-219ENST00000559397 C20orf197Q8N268 126 aa9.16□□□□□ -0.94
TPM1-219ENST00000559397 LRP2P98164 4655 aa9.15□□□□□ -0.94
TPM1-219ENST00000559397 C5orf47Q569G3 176 aa9.13□□□□□ -0.95
TPM1-219ENST00000559397 LCE2DQ5TA82 110 aaPredicted RBP9.13□□□□□ -0.95
TPM1-219ENST00000559397 KRTAP16-1A8MUX0 517 aa9.13□□□□□ -0.95
TPM1-219ENST00000559397 KLKP1Q107X0 134 aa9.13□□□□□ -0.95
TPM1-219ENST00000559397 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
TPM1-219ENST00000559397 CYSTM1Q9H1C7 97 aa9.12□□□□□ -0.95
TPM1-219ENST00000559397 TPRXLQ17RH7 258 aa9.11□□□□□ -0.95
TPM1-219ENST00000559397 A0A0U1RQV1 116 aa9.1□□□□□ -0.95
TPM1-219ENST00000559397 KRTAP13-3Q3SY46 172 aa9.1□□□□□ -0.95
TPM1-219ENST00000559397 Q8N9P0 234 aaPredicted RBP9.1□□□□□ -0.95
TPM1-219ENST00000559397 SNURFQ9Y675 71 aa9.07□□□□□ -0.96
TPM1-219ENST00000559397 NDUFS5O43920 106 aa9.07□□□□□ -0.96
TPM1-219ENST00000559397 ZCCHC13Q8WW36 166 aaKnown RBP9.06□□□□□ -0.96
TPM1-219ENST00000559397 MUC17Q685J3 4493 aa9.05□□□□□ -0.96
TPM1-219ENST00000559397 TRAV22A0A0B4J277 110 aa9.04□□□□□ -0.96
TPM1-219ENST00000559397 H0Y9P7 68 aa9.04□□□□□ -0.96
TPM1-219ENST00000559397 MP68P56378 58 aa9.04□□□□□ -0.96
TPM1-219ENST00000559397 C9orf92A6NGG3 77 aa9.04□□□□□ -0.96
TPM1-219ENST00000559397 H3BPC8 53 aa9.03□□□□□ -0.96
TPM1-219ENST00000559397 NDUFC1O43677 76 aa9.01□□□□□ -0.97
TPM1-219ENST00000559397 H7BZZ5 65 aa9□□□□□ -0.97
TPM1-219ENST00000559397 LINC00208Q96KT6 92 aa8.99□□□□□ -0.97
TPM1-219ENST00000559397 Q5W150 140 aa8.98□□□□□ -0.97
TPM1-219ENST00000559397 XP32Q5T750 250 aa8.97□□□□□ -0.97
TPM1-219ENST00000559397 C1orf64Q8NEQ6 169 aa8.96□□□□□ -0.98
TPM1-219ENST00000559397 UBR4Q5T4S7 5183 aa8.95□□□□□ -0.98
TPM1-219ENST00000559397 TMEM258P61165 79 aa8.95□□□□□ -0.98
TPM1-219ENST00000559397 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
TPM1-219ENST00000559397 A8MUU9 505 aa8.94□□□□□ -0.98
TPM1-219ENST00000559397 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
TPM1-219ENST00000559397 RPL37P61927 97 aaKnown RBP8.85□□□□□ -0.99
TPM1-219ENST00000559397 Q75L30 129 aa8.85□□□□□ -0.99
TPM1-219ENST00000559397 RNF213Q63HN8 5207 aa8.85□□□□□ -0.99
TPM1-219ENST00000559397 FAM236DA0A1B0GTK5 79 aa8.84□□□□□ -0.99
TPM1-219ENST00000559397 FAM236CP0DP71 79 aa8.84□□□□□ -0.99
TPM1-219ENST00000559397 CYP4F30PQ9H0H9 118 aa8.83□□□□□ -1
TPM1-219ENST00000559397 IGKV2-30P06310 120 aa8.82□□□□□ -1
TPM1-219ENST00000559397 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
TPM1-219ENST00000559397 SPANXA2-OT1Q8N9U9 137 aa8.79□□□□□ -1
TPM1-219ENST00000559397 SEC61BP60468 96 aaKnown RBP8.78□□□□□ -1
TPM1-219ENST00000559397 PCOTHQ58A44 107 aa8.78□□□□□ -1
TPM1-219ENST00000559397 MUC2Q02817 5179 aa8.75□□□□□ -1.01
TPM1-219ENST00000559397 IGKV2D-30A0A075B6S6 120 aa8.72□□□□□ -1.01
TPM1-219ENST00000559397 ATP11AUNQ6ZP68 121 aa8.72□□□□□ -1.01
TPM1-219ENST00000559397 RPS28P62857 69 aaKnown RBP8.7□□□□□ -1.02
TPM1-219ENST00000559397 C7orf65Q6ZTY9 151 aa8.7□□□□□ -1.02
TPM1-219ENST00000559397 HRES1P13985 223 aa8.68□□□□□ -1.02
TPM1-219ENST00000559397 SERP1Q9Y6X1 66 aa8.68□□□□□ -1.02
TPM1-219ENST00000559397 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
TPM1-219ENST00000559397 SPINK7P58062 85 aa8.62□□□□□ -1.03
TPM1-219ENST00000559397 DMAC1Q96GE9 116 aa8.56□□□□□ -1.04
TPM1-219ENST00000559397 C4orf26Q17RF5 130 aa8.5□□□□□ -1.05
TPM1-219ENST00000559397 COA5Q86WW8 74 aa8.5□□□□□ -1.05
TPM1-219ENST00000559397 ACYP2P14621 99 aa8.49□□□□□ -1.05
TPM1-219ENST00000559397 FAT4Q6V0I7 4981 aa8.49□□□□□ -1.05
TPM1-219ENST00000559397 A8MUN3 132 aa8.46□□□□□ -1.05
TPM1-219ENST00000559397 SMIM26A0A096LP01 95 aa8.45□□□□□ -1.06
TPM1-219ENST00000559397 KRTAP3-1Q9BYR8 98 aa8.44□□□□□ -1.06
TPM1-219ENST00000559397 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
TPM1-219ENST00000559397 KRTAP19-2Q3LHN2 52 aa8.42□□□□□ -1.06
TPM1-219ENST00000559397 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.07
TPM1-219ENST00000559397 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms