RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 SMG1Q96Q15 3661 aaKnown RBP5.71□□□□□ -1.5
TRPM1-207ENST00000558445 HRNRQ86YZ3 2850 aaPredicted RBP5.71□□□□□ -1.5
TRPM1-207ENST00000558445 STAB1Q9NY15 2570 aa5.7□□□□□ -1.5
TRPM1-207ENST00000558445 NOTCH1P46531 2555 aa5.7□□□□□ -1.5
TRPM1-207ENST00000558445 SPENQ96T58 3664 aaKnown RBP5.7□□□□□ -1.5
TRPM1-207ENST00000558445 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
TRPM1-207ENST00000558445 ATMQ13315 3056 aa5.68□□□□□ -1.5
TRPM1-207ENST00000558445 KRTAP10-9P60411 292 aa5.67□□□□□ -1.5
TRPM1-207ENST00000558445 C10orf95Q9H7T3 257 aa5.66□□□□□ -1.5
TRPM1-207ENST00000558445 J3QL48 77 aa5.66□□□□□ -1.5
TRPM1-207ENST00000558445 PLAC4Q8WY50 150 aa5.66□□□□□ -1.5
TRPM1-207ENST00000558445 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.5
TRPM1-207ENST00000558445 DCHS2Q6V1P9 2916 aa5.65□□□□□ -1.5
TRPM1-207ENST00000558445 NF1P21359 2839 aa5.65□□□□□ -1.51
TRPM1-207ENST00000558445 TPRXLQ17RH7 258 aa5.62□□□□□ -1.51
TRPM1-207ENST00000558445 KRTAP10-3P60369 221 aa5.62□□□□□ -1.51
TRPM1-207ENST00000558445 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
TRPM1-207ENST00000558445 COL6A5A8TX70 2615 aa5.59□□□□□ -1.51
TRPM1-207ENST00000558445 FLNAP21333 2647 aaKnown RBP5.56□□□□□ -1.52
TRPM1-207ENST00000558445 UBR5O95071 2799 aaPredicted RBP5.55□□□□□ -1.52
TRPM1-207ENST00000558445 FLNCQ14315 2725 aa5.54□□□□□ -1.52
TRPM1-207ENST00000558445 R4GN34 69 aa5.54□□□□□ -1.52
TRPM1-207ENST00000558445 KRTAP24-1Q3LI83 254 aa5.54□□□□□ -1.52
TRPM1-207ENST00000558445 SMR3AQ99954 134 aa5.52□□□□□ -1.53
TRPM1-207ENST00000558445 S4R3F8 94 aa5.52□□□□□ -1.53
TRPM1-207ENST00000558445 IGSF10Q6WRI0 2623 aa5.51□□□□□ -1.53
TRPM1-207ENST00000558445 KMT2BQ9UMN6 2715 aaPredicted RBP5.48□□□□□ -1.53
TRPM1-207ENST00000558445 KRTAP1-5Q9BYS1 174 aa5.47□□□□□ -1.53
TRPM1-207ENST00000558445 STAB2Q8WWQ8 2551 aa5.46□□□□□ -1.53
TRPM1-207ENST00000558445 ZANQ9Y493 2812 aa5.46□□□□□ -1.54
TRPM1-207ENST00000558445 FBN2P35556 2912 aa5.46□□□□□ -1.54
TRPM1-207ENST00000558445 SVEP1Q4LDE5 3571 aa5.46□□□□□ -1.54
TRPM1-207ENST00000558445 CRYBG3Q68DQ2 2970 aa5.46□□□□□ -1.54
TRPM1-207ENST00000558445 KRTAP10-11P60412 298 aa5.45□□□□□ -1.54
TRPM1-207ENST00000558445 KRTAP1-3Q8IUG1 177 aa5.44□□□□□ -1.54
TRPM1-207ENST00000558445 CELSR1Q9NYQ6 3014 aa5.43□□□□□ -1.54
TRPM1-207ENST00000558445 ITPR2Q14571 2701 aa5.42□□□□□ -1.54
TRPM1-207ENST00000558445 MXRA5Q9NR99 2828 aa5.42□□□□□ -1.54
TRPM1-207ENST00000558445 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
TRPM1-207ENST00000558445 M0QZ58 72 aa5.41□□□□□ -1.54
TRPM1-207ENST00000558445 CSMD2Q7Z408 3487 aa5.4□□□□□ -1.54
TRPM1-207ENST00000558445 TENM2Q9NT68 2774 aa5.39□□□□□ -1.55
TRPM1-207ENST00000558445 ALMS1Q8TCU4 4167 aa5.38□□□□□ -1.55
TRPM1-207ENST00000558445 NSD1Q96L73 2696 aaPredicted RBP5.38□□□□□ -1.55
TRPM1-207ENST00000558445 KRTAP1-1Q07627 177 aa5.38□□□□□ -1.55
TRPM1-207ENST00000558445 RELNP78509 3460 aa5.37□□□□□ -1.55
TRPM1-207ENST00000558445 HIVEP1P15822 2718 aa5.34□□□□□ -1.55
TRPM1-207ENST00000558445 SRRM2Q9UQ35 2752 aaKnown RBP5.34□□□□□ -1.56
TRPM1-207ENST00000558445 NIPBLQ6KC79 2804 aaeCLIP5.32□□□□□ -1.56
TRPM1-207ENST00000558445 CELSR2Q9HCU4 2923 aa5.32□□□□□ -1.56
TRPM1-207ENST00000558445 TGP01266 2768 aa5.31□□□□□ -1.56
TRPM1-207ENST00000558445 TENM4Q6N022 2769 aa5.27□□□□□ -1.57
TRPM1-207ENST00000558445 KRTAP13-2Q52LG2 175 aa5.27□□□□□ -1.57
TRPM1-207ENST00000558445 OTOGQ6ZRI0 2925 aa5.27□□□□□ -1.57
TRPM1-207ENST00000558445 CUBNO60494 3623 aa5.25□□□□□ -1.57
TRPM1-207ENST00000558445 XP32Q5T750 250 aa5.23□□□□□ -1.57
TRPM1-207ENST00000558445 KRTAP12-2P59991 146 aa5.22□□□□□ -1.57
TRPM1-207ENST00000558445 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.58
TRPM1-207ENST00000558445 BSNQ9UPA5 3926 aa5.21□□□□□ -1.58
TRPM1-207ENST00000558445 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
TRPM1-207ENST00000558445 TNP1P09430 55 aa5.19□□□□□ -1.58
TRPM1-207ENST00000558445 Q6ZRN7 208 aaPredicted RBP5.19□□□□□ -1.58
TRPM1-207ENST00000558445 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
TRPM1-207ENST00000558445 VPS13CQ709C8 3753 aa5.16□□□□□ -1.58
TRPM1-207ENST00000558445 KRTAP12-1P59990 96 aa5.15□□□□□ -1.58
TRPM1-207ENST00000558445 KRTAP10-8P60410 259 aa5.15□□□□□ -1.58
TRPM1-207ENST00000558445 PRO2289Q9P1D8 64 aa5.15□□□□□ -1.58
TRPM1-207ENST00000558445 RPS29P62273 56 aaKnown RBP5.14□□□□□ -1.59
TRPM1-207ENST00000558445 TENM3Q9P273 2699 aa5.13□□□□□ -1.59
TRPM1-207ENST00000558445 PDZD2O15018 2839 aa5.11□□□□□ -1.59
TRPM1-207ENST00000558445 SMR3BP02814 79 aaPredicted RBP5.11□□□□□ -1.59
TRPM1-207ENST00000558445 PKD1L1Q8TDX9 2849 aa5.1□□□□□ -1.59
TRPM1-207ENST00000558445 NBPF19A0A087WUL8 3843 aa5.04□□□□□ -1.6
TRPM1-207ENST00000558445 INE1O15225 51 aa5.03□□□□□ -1.6
TRPM1-207ENST00000558445 VWFP04275 2813 aa5.03□□□□□ -1.6
TRPM1-207ENST00000558445 KRTAP3-2Q9BYR7 98 aa5.03□□□□□ -1.6
TRPM1-207ENST00000558445 FBN1P35555 2871 aaKnown RBP5.01□□□□□ -1.61
TRPM1-207ENST00000558445 KRTAP1-4P0C5Y4 121 aa5.01□□□□□ -1.61
TRPM1-207ENST00000558445 COL7A1Q02388 2944 aa4.97□□□□□ -1.61
TRPM1-207ENST00000558445 MEGF8Q7Z7M0 2845 aa4.95□□□□□ -1.62
TRPM1-207ENST00000558445 M0R2T5 61 aa4.94□□□□□ -1.62
TRPM1-207ENST00000558445 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
TRPM1-207ENST00000558445 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
TRPM1-207ENST00000558445 AKAP9Q99996 3911 aa4.89□□□□□ -1.63
TRPM1-207ENST00000558445 KRTAP10-2P60368 255 aa4.89□□□□□ -1.63
TRPM1-207ENST00000558445 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
TRPM1-207ENST00000558445 ZNF469Q96JG9 3925 aaPredicted RBP4.85□□□□□ -1.63
TRPM1-207ENST00000558445 TENM1Q9UKZ4 2725 aa4.85□□□□□ -1.63
TRPM1-207ENST00000558445 FBN3Q75N90 2809 aa4.73□□□□□ -1.65
TRPM1-207ENST00000558445 Q5VSD8 79 aa4.68□□□□□ -1.66
TRPM1-207ENST00000558445 ANK3Q12955 4377 aaKnown RBP4.61□□□□□ -1.67
TRPM1-207ENST00000558445 CSMD3Q7Z407 3707 aa4.61□□□□□ -1.67
TRPM1-207ENST00000558445 TRRAPQ9Y4A5 3859 aa4.6□□□□□ -1.67
TRPM1-207ENST00000558445 DNAH10Q8IVF4 4471 aa4.59□□□□□ -1.67
TRPM1-207ENST00000558445 DNAH8Q96JB1 4490 aa4.59□□□□□ -1.67
TRPM1-207ENST00000558445 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
TRPM1-207ENST00000558445 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
TRPM1-207ENST00000558445 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.7
TRPM1-207ENST00000558445 HUWE1Q7Z6Z7 4374 aaKnown RBP4.4□□□□□ -1.7
TRPM1-207ENST00000558445 DNAH11Q96DT5 4516 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms