RNA–Protein interactions for RNA: ENST00000557522.1

FRMD6-218, Transcript of FERM domain containing 6, humanhuman

TSL 1 (best)

Gene FRMD6, Length 5,123 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD6-218ENST00000557522 NIPBLQ6KC79 2804 aaeCLIP5.57□□□□□ -1.52
FRMD6-218ENST00000557522 KALRNO60229 2985 aa5.54□□□□□ -1.52
FRMD6-218ENST00000557522 KRTAP3-3Q9BYR6 98 aa5.51□□□□□ -1.53
FRMD6-218ENST00000557522 KRTAP21-3Q3LHN1 58 aa5.46□□□□□ -1.53
FRMD6-218ENST00000557522 HIVEP1P15822 2718 aa5.43□□□□□ -1.54
FRMD6-218ENST00000557522 PCNTO95613 3336 aa5.43□□□□□ -1.54
FRMD6-218ENST00000557522 LAMA1P25391 3075 aa5.41□□□□□ -1.54
FRMD6-218ENST00000557522 TENM2Q9NT68 2774 aa5.4□□□□□ -1.55
FRMD6-218ENST00000557522 ASH1LQ9NR48 2969 aaKnown RBP5.4□□□□□ -1.55
FRMD6-218ENST00000557522 DSPP15924 2871 aaKnown RBP5.4□□□□□ -1.55
FRMD6-218ENST00000557522 NBEAQ8NFP9 2946 aa5.38□□□□□ -1.55
FRMD6-218ENST00000557522 TRIOO75962 3097 aa5.35□□□□□ -1.55
FRMD6-218ENST00000557522 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
FRMD6-218ENST00000557522 ZZEF1O43149 2961 aa5.32□□□□□ -1.56
FRMD6-218ENST00000557522 LAMA2P24043 3122 aaKnown RBP5.32□□□□□ -1.56
FRMD6-218ENST00000557522 TENM3Q9P273 2699 aa5.32□□□□□ -1.56
FRMD6-218ENST00000557522 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
FRMD6-218ENST00000557522 PRUNE2Q8WUY3 3088 aa5.27□□□□□ -1.57
FRMD6-218ENST00000557522 FREM2Q5SZK8 3169 aa5.24□□□□□ -1.57
FRMD6-218ENST00000557522 UTRNP46939 3433 aa5.24□□□□□ -1.57
FRMD6-218ENST00000557522 TENM1Q9UKZ4 2725 aa5.22□□□□□ -1.57
FRMD6-218ENST00000557522 CELSR2Q9HCU4 2923 aa5.21□□□□□ -1.58
FRMD6-218ENST00000557522 HTTP42858 3142 aa5.19□□□□□ -1.58
FRMD6-218ENST00000557522 FRYLO94915 3013 aa5.17□□□□□ -1.58
FRMD6-218ENST00000557522 GOLGB1Q14789 3259 aaKnown RBP5.17□□□□□ -1.58
FRMD6-218ENST00000557522 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
FRMD6-218ENST00000557522 FLNCQ14315 2725 aa5.16□□□□□ -1.58
FRMD6-218ENST00000557522 WDFY4Q6ZS81 3184 aa5.16□□□□□ -1.58
FRMD6-218ENST00000557522 COL12A1Q99715 3063 aa5.15□□□□□ -1.59
FRMD6-218ENST00000557522 VPS13AQ96RL7 3174 aa5.14□□□□□ -1.59
FRMD6-218ENST00000557522 DCHS2Q6V1P9 2916 aa5.14□□□□□ -1.59
FRMD6-218ENST00000557522 DMXL2Q8TDJ6 3036 aa5.13□□□□□ -1.59
FRMD6-218ENST00000557522 HRNRQ86YZ3 2850 aaPredicted RBP5.12□□□□□ -1.59
FRMD6-218ENST00000557522 ADGRG4Q8IZF6 3080 aa5.12□□□□□ -1.59
FRMD6-218ENST00000557522 UNC80Q8N2C7 3258 aa5.11□□□□□ -1.59
FRMD6-218ENST00000557522 NF1P21359 2839 aa5.11□□□□□ -1.59
FRMD6-218ENST00000557522 TACC2O95359 2948 aa5.1□□□□□ -1.59
FRMD6-218ENST00000557522 TNRC18O15417 2968 aaPredicted RBP5.07□□□□□ -1.6
FRMD6-218ENST00000557522 ATMQ13315 3056 aa5.05□□□□□ -1.6
FRMD6-218ENST00000557522 PDZD2O15018 2839 aa5.04□□□□□ -1.6
FRMD6-218ENST00000557522 TENM4Q6N022 2769 aa5.03□□□□□ -1.6
FRMD6-218ENST00000557522 ZANQ9Y493 2812 aa5.02□□□□□ -1.61
FRMD6-218ENST00000557522 RANBP2P49792 3224 aaKnown RBP5.02□□□□□ -1.61
FRMD6-218ENST00000557522 MKI67P46013 3256 aaKnown RBP4.95□□□□□ -1.62
FRMD6-218ENST00000557522 FBN2P35556 2912 aa4.95□□□□□ -1.62
FRMD6-218ENST00000557522 SRRM2Q9UQ35 2752 aaKnown RBP4.94□□□□□ -1.62
FRMD6-218ENST00000557522 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
FRMD6-218ENST00000557522 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
FRMD6-218ENST00000557522 CELSR1Q9NYQ6 3014 aa4.91□□□□□ -1.62
FRMD6-218ENST00000557522 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
FRMD6-218ENST00000557522 BOD1L1Q8NFC6 3051 aa4.9□□□□□ -1.62
FRMD6-218ENST00000557522 LORP23490 312 aaPredicted RBP4.9□□□□□ -1.63
FRMD6-218ENST00000557522 MXRA5Q9NR99 2828 aa4.88□□□□□ -1.63
FRMD6-218ENST00000557522 KRTAP10-4P60372 401 aaPredicted RBP4.87□□□□□ -1.63
FRMD6-218ENST00000557522 ZFHX3Q15911 3703 aa4.87□□□□□ -1.63
FRMD6-218ENST00000557522 REV3LO60673 3130 aa4.85□□□□□ -1.63
FRMD6-218ENST00000557522 PKD1L1Q8TDX9 2849 aa4.85□□□□□ -1.63
FRMD6-218ENST00000557522 CRCT1Q9UGL9 99 aa4.85□□□□□ -1.63
FRMD6-218ENST00000557522 CELSR3Q9NYQ7 3312 aa4.83□□□□□ -1.64
FRMD6-218ENST00000557522 MEGF8Q7Z7M0 2845 aa4.82□□□□□ -1.64
FRMD6-218ENST00000557522 CRYBG3Q68DQ2 2970 aa4.82□□□□□ -1.64
FRMD6-218ENST00000557522 DMXL1Q9Y485 3027 aa4.81□□□□□ -1.64
FRMD6-218ENST00000557522 ALMS1Q8TCU4 4167 aa4.79□□□□□ -1.64
FRMD6-218ENST00000557522 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
FRMD6-218ENST00000557522 KRTAP8-1Q8IUC2 63 aa4.76□□□□□ -1.65
FRMD6-218ENST00000557522 FBN3Q75N90 2809 aa4.75□□□□□ -1.65
FRMD6-218ENST00000557522 EYSQ5T1H1 3165 aa4.71□□□□□ -1.66
FRMD6-218ENST00000557522 XIRP2A4UGR9 3374 aa4.7□□□□□ -1.66
FRMD6-218ENST00000557522 COL6A3P12111 3177 aa4.7□□□□□ -1.66
FRMD6-218ENST00000557522 LAMA3Q16787 3333 aa4.69□□□□□ -1.66
FRMD6-218ENST00000557522 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
FRMD6-218ENST00000557522 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
FRMD6-218ENST00000557522 CFAP47Q6ZTR5 3102 aa4.65□□□□□ -1.67
FRMD6-218ENST00000557522 VCANP13611 3396 aa4.62□□□□□ -1.67
FRMD6-218ENST00000557522 VWFP04275 2813 aa4.59□□□□□ -1.67
FRMD6-218ENST00000557522 DNAH2Q9P225 4427 aa4.59□□□□□ -1.68
FRMD6-218ENST00000557522 HUWE1Q7Z6Z7 4374 aaKnown RBP4.59□□□□□ -1.68
FRMD6-218ENST00000557522 DNAH14Q0VDD8 3507 aa4.57□□□□□ -1.68
FRMD6-218ENST00000557522 DNAH11Q96DT5 4516 aa4.49□□□□□ -1.69
FRMD6-218ENST00000557522 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
FRMD6-218ENST00000557522 COL7A1Q02388 2944 aa4.48□□□□□ -1.69
FRMD6-218ENST00000557522 BRCA2P51587 3418 aa4.44□□□□□ -1.7
FRMD6-218ENST00000557522 CDH23Q9H251 3354 aa4.42□□□□□ -1.7
FRMD6-218ENST00000557522 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
FRMD6-218ENST00000557522 USP34Q70CQ2 3546 aa4.39□□□□□ -1.71
FRMD6-218ENST00000557522 DCHS1Q96JQ0 3298 aa4.38□□□□□ -1.71
FRMD6-218ENST00000557522 SZT2Q5T011 3432 aa4.36□□□□□ -1.71
FRMD6-218ENST00000557522 ANK3Q12955 4377 aaKnown RBP4.36□□□□□ -1.71
FRMD6-218ENST00000557522 MT2AP02795 61 aa4.35□□□□□ -1.71
FRMD6-218ENST00000557522 DNAH10Q8IVF4 4471 aa4.35□□□□□ -1.71
FRMD6-218ENST00000557522 KRTAP4-1Q9BYQ7 146 aa4.31□□□□□ -1.72
FRMD6-218ENST00000557522 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
FRMD6-218ENST00000557522 SPEGQ15772 3267 aa4.29□□□□□ -1.72
FRMD6-218ENST00000557522 LOC400499M0QZD8 3231 aa4.28□□□□□ -1.72
FRMD6-218ENST00000557522 KRTAP19-8Q3LI54 63 aa4.28□□□□□ -1.72
FRMD6-218ENST00000557522 MT1HP80294 61 aa4.27□□□□□ -1.73
FRMD6-218ENST00000557522 ZFHX4Q86UP3 3567 aa4.26□□□□□ -1.73
FRMD6-218ENST00000557522 OTOGQ6ZRI0 2925 aa4.25□□□□□ -1.73
FRMD6-218ENST00000557522 DNAH8Q96JB1 4490 aa4.22□□□□□ -1.73
FRMD6-218ENST00000557522 WDFY3Q8IZQ1 3526 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms