RNA–Protein interactions for RNA: ENST00000557522.1

FRMD6-218, Transcript of FERM domain containing 6, humanhuman

TSL 1 (best)

Gene FRMD6, Length 5,123 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD6-218ENST00000557522 MYT1Q01538 1121 aa20.44■□□□□ 0.86
FRMD6-218ENST00000557522 PELP1Q8IZL8 1130 aaKnown RBP20.34■□□□□ 0.85
FRMD6-218ENST00000557522 CENPBP07199 599 aaPredicted RBP19.22■□□□□ 0.67
FRMD6-218ENST00000557522 CCER1Q8TC90 406 aaPredicted RBP19.12■□□□□ 0.65
FRMD6-218ENST00000557522 ERICH6Q7L0X2 663 aa19.06■□□□□ 0.64
FRMD6-218ENST00000557522 ZEB1P37275 1124 aaPredicted RBP19.05■□□□□ 0.64
FRMD6-218ENST00000557522 TTBK1Q5TCY1 1321 aaPredicted RBP18.75■□□□□ 0.59
FRMD6-218ENST00000557522 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
FRMD6-218ENST00000557522 PCGF6Q9BYE7 350 aa18.58■□□□□ 0.56
FRMD6-218ENST00000557522 DCAF8L2P0C7V8 631 aa18.53■□□□□ 0.56
FRMD6-218ENST00000557522 YTHDC1Q96MU7 727 aaKnown RBP18.48■□□□□ 0.55
FRMD6-218ENST00000557522 NEFLP07196 543 aa18.43■□□□□ 0.54
FRMD6-218ENST00000557522 HRCP23327 699 aa18.37■□□□□ 0.53
FRMD6-218ENST00000557522 APLP2Q06481 763 aa18.23■□□□□ 0.51
FRMD6-218ENST00000557522 NISCHQ9Y2I1 1504 aa17.97■□□□□ 0.47
FRMD6-218ENST00000557522 TRIM26Q12899 539 aaPredicted RBP17.95■□□□□ 0.46
FRMD6-218ENST00000557522 RTL5Q5HYW3 569 aaPredicted RBP17.92■□□□□ 0.46
FRMD6-218ENST00000557522 DAXXQ9UER7 740 aaPredicted RBP17.88■□□□□ 0.45
FRMD6-218ENST00000557522 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
FRMD6-218ENST00000557522 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
FRMD6-218ENST00000557522 MYT1LQ9UL68 1186 aa17.71■□□□□ 0.43
FRMD6-218ENST00000557522 GLIPR1L2Q4G1C9 344 aa17.62■□□□□ 0.41
FRMD6-218ENST00000557522 CLSPNQ9HAW4 1339 aa17.6■□□□□ 0.41
FRMD6-218ENST00000557522 GTF3C3Q9Y5Q9 886 aa17.57■□□□□ 0.4
FRMD6-218ENST00000557522 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
FRMD6-218ENST00000557522 FAM9AQ8IZU1 332 aaPredicted RBP17.52■□□□□ 0.39
FRMD6-218ENST00000557522 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
FRMD6-218ENST00000557522 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
FRMD6-218ENST00000557522 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
FRMD6-218ENST00000557522 PPARGC1BQ86YN6 1023 aaKnown RBP17.42■□□□□ 0.38
FRMD6-218ENST00000557522 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
FRMD6-218ENST00000557522 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
FRMD6-218ENST00000557522 ANP32AP39687 249 aaKnown RBP17.13■□□□□ 0.33
FRMD6-218ENST00000557522 UBTFP17480 764 aaKnown RBP17.13■□□□□ 0.33
FRMD6-218ENST00000557522 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
FRMD6-218ENST00000557522 ANP32EQ9BTT0 268 aa17■□□□□ 0.31
FRMD6-218ENST00000557522 BCANQ96GW7 911 aa16.97■□□□□ 0.31
FRMD6-218ENST00000557522 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
FRMD6-218ENST00000557522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.92■□□□□ 0.3
FRMD6-218ENST00000557522 ANP32BQ92688 251 aaKnown RBP16.9■□□□□ 0.3
FRMD6-218ENST00000557522 ANP32CO43423 234 aa16.88■□□□□ 0.29
FRMD6-218ENST00000557522 BCL11AQ9H165 835 aa16.84■□□□□ 0.29
FRMD6-218ENST00000557522 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
FRMD6-218ENST00000557522 HNRNPUL2Q1KMD3 747 aaKnown RBP16.79■□□□□ 0.28
FRMD6-218ENST00000557522 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
FRMD6-218ENST00000557522 NEUROD1Q13562 356 aa16.77■□□□□ 0.28
FRMD6-218ENST00000557522 ATP1B4Q9UN42 357 aaPredicted RBP16.76■□□□□ 0.27
FRMD6-218ENST00000557522 TNNT2P45379 298 aaPredicted RBP16.74■□□□□ 0.27
FRMD6-218ENST00000557522 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
FRMD6-218ENST00000557522 FKBP8Q14318 412 aa16.69■□□□□ 0.26
FRMD6-218ENST00000557522 DCAF1Q9Y4B6 1507 aa16.66■□□□□ 0.26
FRMD6-218ENST00000557522 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
FRMD6-218ENST00000557522 POLR3GLQ9BT43 218 aa16.65■□□□□ 0.26
FRMD6-218ENST00000557522 NBR1Q14596 966 aa16.57■□□□□ 0.24
FRMD6-218ENST00000557522 NCLP19338 710 aaKnown RBP16.57■□□□□ 0.24
FRMD6-218ENST00000557522 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
FRMD6-218ENST00000557522 TRIM44Q96DX7 344 aaPredicted RBP16.54■□□□□ 0.24
FRMD6-218ENST00000557522 ITGAEP38570 1179 aa16.54■□□□□ 0.24
FRMD6-218ENST00000557522 UPF2Q9HAU5 1272 aaKnown RBP16.53■□□□□ 0.24
FRMD6-218ENST00000557522 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
FRMD6-218ENST00000557522 PPM1GO15355 546 aaPredicted RBP16.5■□□□□ 0.23
FRMD6-218ENST00000557522 NEFMP07197 916 aa16.41■□□□□ 0.22
FRMD6-218ENST00000557522 CDK11BP21127 795 aaKnown RBP16.39■□□□□ 0.21
FRMD6-218ENST00000557522 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
FRMD6-218ENST00000557522 CANXP27824 592 aaKnown RBP16.36■□□□□ 0.21
FRMD6-218ENST00000557522 HSP90AA1P07900 732 aaKnown RBP16.35■□□□□ 0.21
FRMD6-218ENST00000557522 CNGB1Q14028 1251 aaPredicted RBP16.33■□□□□ 0.2
FRMD6-218ENST00000557522 BECN1Q14457 450 aa16.31■□□□□ 0.2
FRMD6-218ENST00000557522 NAP1L5Q96NT1 182 aaPredicted RBP16.31■□□□□ 0.2
FRMD6-218ENST00000557522 DEKP35659 375 aaKnown RBP16.29■□□□□ 0.2
FRMD6-218ENST00000557522 HNRNPUQ00839 825 aaKnown RBP eCLIP16.29■□□□□ 0.2
FRMD6-218ENST00000557522 NOP58Q9Y2X3 529 aaKnown RBP16.29■□□□□ 0.2
FRMD6-218ENST00000557522 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.24■□□□□ 0.19
FRMD6-218ENST00000557522 MIER1Q8N108 512 aa16.21■□□□□ 0.18
FRMD6-218ENST00000557522 L1TD1Q5T7N2 865 aaKnown RBP16.2■□□□□ 0.18
FRMD6-218ENST00000557522 GOLGA6L22H0YM25 854 aa16.2■□□□□ 0.18
FRMD6-218ENST00000557522 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
FRMD6-218ENST00000557522 FAM50AQ14320 339 aaKnown RBP16.18■□□□□ 0.18
FRMD6-218ENST00000557522 SUPT16HQ9Y5B9 1047 aaKnown RBP16.15■□□□□ 0.18
FRMD6-218ENST00000557522 TRIM52Q96A61 297 aa16.14■□□□□ 0.17
FRMD6-218ENST00000557522 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
FRMD6-218ENST00000557522 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
FRMD6-218ENST00000557522 PPP4R2Q9NY27 417 aa16.11■□□□□ 0.17
FRMD6-218ENST00000557522 RSPH6AQ9H0K4 717 aa16.1■□□□□ 0.17
FRMD6-218ENST00000557522 SLC4A1APQ9BWU0 796 aaKnown RBP16.08■□□□□ 0.16
FRMD6-218ENST00000557522 ARXQ96QS3 562 aa16.05■□□□□ 0.16
FRMD6-218ENST00000557522 DDX10Q13206 875 aaKnown RBP16.05■□□□□ 0.16
FRMD6-218ENST00000557522 RBM19Q9Y4C8 960 aaKnown RBP16.04■□□□□ 0.16
FRMD6-218ENST00000557522 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
FRMD6-218ENST00000557522 PTMAP06454 111 aaKnown RBP16.02■□□□□ 0.16
FRMD6-218ENST00000557522 DNTTIP2Q5QJE6 756 aaKnown RBP16.02■□□□□ 0.16
FRMD6-218ENST00000557522 FAM9BQ8IZU0 186 aa16■□□□□ 0.15
FRMD6-218ENST00000557522 PNNQ9H307 717 aaKnown RBP15.99■□□□□ 0.15
FRMD6-218ENST00000557522 CHAF1AQ13111 956 aaPredicted RBP15.95■□□□□ 0.14
FRMD6-218ENST00000557522 MSNP26038 577 aaKnown RBP15.95■□□□□ 0.14
FRMD6-218ENST00000557522 USP35Q9P2H5 1018 aa15.94■□□□□ 0.14
FRMD6-218ENST00000557522 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
FRMD6-218ENST00000557522 PTMSP20962 102 aa15.93■□□□□ 0.14
FRMD6-218ENST00000557522 TMC1Q8TDI8 760 aa15.92■□□□□ 0.14
FRMD6-218ENST00000557522 HSP90AA2PQ14568 343 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms