RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 CELSR2Q9HCU4 2923 aa4.54□□□□□ -1.68
CHD8-213ENST00000557364 CDH23Q9H251 3354 aa4.53□□□□□ -1.69
CHD8-213ENST00000557364 TACC2O95359 2948 aa4.52□□□□□ -1.69
CHD8-213ENST00000557364 NF1P21359 2839 aa4.52□□□□□ -1.69
CHD8-213ENST00000557364 ZZEF1O43149 2961 aa4.52□□□□□ -1.69
CHD8-213ENST00000557364 KALRNO60229 2985 aa4.52□□□□□ -1.69
CHD8-213ENST00000557364 REV3LO60673 3130 aa4.52□□□□□ -1.69
CHD8-213ENST00000557364 DNAH14Q0VDD8 3507 aa4.51□□□□□ -1.69
CHD8-213ENST00000557364 COL12A1Q99715 3063 aa4.51□□□□□ -1.69
CHD8-213ENST00000557364 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
CHD8-213ENST00000557364 TRIOO75962 3097 aa4.5□□□□□ -1.69
CHD8-213ENST00000557364 NBEAQ8NFP9 2946 aa4.49□□□□□ -1.69
CHD8-213ENST00000557364 KRTAP1-4P0C5Y4 121 aa4.49□□□□□ -1.69
CHD8-213ENST00000557364 DCHS2Q6V1P9 2916 aa4.48□□□□□ -1.69
CHD8-213ENST00000557364 KRTAP10-8P60410 259 aa4.46□□□□□ -1.69
CHD8-213ENST00000557364 ATMQ13315 3056 aa4.46□□□□□ -1.7
CHD8-213ENST00000557364 DMXL2Q8TDJ6 3036 aa4.45□□□□□ -1.7
CHD8-213ENST00000557364 LAMA1P25391 3075 aa4.45□□□□□ -1.7
CHD8-213ENST00000557364 ASH1LQ9NR48 2969 aaKnown RBP4.45□□□□□ -1.7
CHD8-213ENST00000557364 A8MU10 97 aa4.44□□□□□ -1.7
CHD8-213ENST00000557364 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
CHD8-213ENST00000557364 KRTAP10-10P60014 251 aa4.43□□□□□ -1.7
CHD8-213ENST00000557364 SZT2Q5T011 3432 aa4.42□□□□□ -1.7
CHD8-213ENST00000557364 ZANQ9Y493 2812 aa4.42□□□□□ -1.7
CHD8-213ENST00000557364 TNRC18O15417 2968 aaPredicted RBP4.42□□□□□ -1.7
CHD8-213ENST00000557364 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
CHD8-213ENST00000557364 SPTBN5Q9NRC6 3674 aaKnown RBP4.4□□□□□ -1.7
CHD8-213ENST00000557364 MXRA5Q9NR99 2828 aa4.4□□□□□ -1.7
CHD8-213ENST00000557364 A6NN06 94 aa4.4□□□□□ -1.71
CHD8-213ENST00000557364 COL6A3P12111 3177 aa4.38□□□□□ -1.71
CHD8-213ENST00000557364 TENM2Q9NT68 2774 aa4.36□□□□□ -1.71
CHD8-213ENST00000557364 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
CHD8-213ENST00000557364 ADGRG4Q8IZF6 3080 aa4.35□□□□□ -1.71
CHD8-213ENST00000557364 UNC80Q8N2C7 3258 aa4.35□□□□□ -1.71
CHD8-213ENST00000557364 A0A1B0GVY2 172 aa4.35□□□□□ -1.71
CHD8-213ENST00000557364 CELSR3Q9NYQ7 3312 aa4.34□□□□□ -1.71
CHD8-213ENST00000557364 BOD1L1Q8NFC6 3051 aa4.31□□□□□ -1.72
CHD8-213ENST00000557364 EYSQ5T1H1 3165 aa4.3□□□□□ -1.72
CHD8-213ENST00000557364 HRNRQ86YZ3 2850 aaPredicted RBP4.3□□□□□ -1.72
CHD8-213ENST00000557364 PDZD2O15018 2839 aa4.3□□□□□ -1.72
CHD8-213ENST00000557364 PKD1L1Q8TDX9 2849 aa4.3□□□□□ -1.72
CHD8-213ENST00000557364 TGP01266 2768 aa4.3□□□□□ -1.72
CHD8-213ENST00000557364 CELSR1Q9NYQ6 3014 aa4.29□□□□□ -1.72
CHD8-213ENST00000557364 WDFY3Q8IZQ1 3526 aa4.27□□□□□ -1.73
CHD8-213ENST00000557364 FBN2P35556 2912 aa4.27□□□□□ -1.73
CHD8-213ENST00000557364 P0C880 135 aa4.26□□□□□ -1.73
CHD8-213ENST00000557364 VCANP13611 3396 aa4.24□□□□□ -1.73
CHD8-213ENST00000557364 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
CHD8-213ENST00000557364 H0YAA0 97 aa4.23□□□□□ -1.73
CHD8-213ENST00000557364 VWFP04275 2813 aa4.22□□□□□ -1.73
CHD8-213ENST00000557364 MYO15AQ9UKN7 3530 aa4.2□□□□□ -1.74
CHD8-213ENST00000557364 FREM2Q5SZK8 3169 aa4.18□□□□□ -1.74
CHD8-213ENST00000557364 DMXL1Q9Y485 3027 aa4.18□□□□□ -1.74
CHD8-213ENST00000557364 SPEGQ15772 3267 aa4.14□□□□□ -1.75
CHD8-213ENST00000557364 DMDP11532 3685 aa4.12□□□□□ -1.75
CHD8-213ENST00000557364 KRTAP13-4Q3LI77 160 aa4.1□□□□□ -1.75
CHD8-213ENST00000557364 NBPF19A0A087WUL8 3843 aa4.1□□□□□ -1.75
CHD8-213ENST00000557364 DCHS1Q96JQ0 3298 aa4.1□□□□□ -1.75
CHD8-213ENST00000557364 CFAP47Q6ZTR5 3102 aa4.09□□□□□ -1.75
CHD8-213ENST00000557364 ASPMQ8IZT6 3477 aa4.06□□□□□ -1.76
CHD8-213ENST00000557364 SRRM2Q9UQ35 2752 aaKnown RBP4.05□□□□□ -1.76
CHD8-213ENST00000557364 ZFHX3Q15911 3703 aa4.03□□□□□ -1.76
CHD8-213ENST00000557364 LAMA5O15230 3695 aa4.03□□□□□ -1.76
CHD8-213ENST00000557364 FBN3Q75N90 2809 aa4.02□□□□□ -1.77
CHD8-213ENST00000557364 SPENQ96T58 3664 aaKnown RBP4.01□□□□□ -1.77
CHD8-213ENST00000557364 COL7A1Q02388 2944 aa3.98□□□□□ -1.77
CHD8-213ENST00000557364 RELNP78509 3460 aa3.97□□□□□ -1.77
CHD8-213ENST00000557364 LOC400499M0QZD8 3231 aa3.96□□□□□ -1.77
CHD8-213ENST00000557364 KRTAP12-2P59991 146 aa3.95□□□□□ -1.78
CHD8-213ENST00000557364 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
CHD8-213ENST00000557364 FBN1P35555 2871 aaKnown RBP3.94□□□□□ -1.78
CHD8-213ENST00000557364 CSMD1Q96PZ7 3565 aa3.94□□□□□ -1.78
CHD8-213ENST00000557364 OTOGQ6ZRI0 2925 aa3.93□□□□□ -1.78
CHD8-213ENST00000557364 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
CHD8-213ENST00000557364 MEGF8Q7Z7M0 2845 aa3.91□□□□□ -1.78
CHD8-213ENST00000557364 ZFHX4Q86UP3 3567 aa3.89□□□□□ -1.79
CHD8-213ENST00000557364 MT1HL1P0DM35 61 aa3.87□□□□□ -1.79
CHD8-213ENST00000557364 SMG1Q96Q15 3661 aaKnown RBP3.86□□□□□ -1.79
CHD8-213ENST00000557364 KRTAP3-1Q9BYR8 98 aa3.84□□□□□ -1.79
CHD8-213ENST00000557364 MUC3AQ02505 3323 aa3.83□□□□□ -1.8
CHD8-213ENST00000557364 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
CHD8-213ENST00000557364 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
CHD8-213ENST00000557364 BSNQ9UPA5 3926 aa3.79□□□□□ -1.8
CHD8-213ENST00000557364 VPS13CQ709C8 3753 aa3.77□□□□□ -1.81
CHD8-213ENST00000557364 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
CHD8-213ENST00000557364 ALMS1Q8TCU4 4167 aa3.77□□□□□ -1.81
CHD8-213ENST00000557364 AKAP9Q99996 3911 aa3.75□□□□□ -1.81
CHD8-213ENST00000557364 INE1O15225 51 aa3.73□□□□□ -1.81
CHD8-213ENST00000557364 KRTAP10-4P60372 401 aaPredicted RBP3.72□□□□□ -1.81
CHD8-213ENST00000557364 SVEP1Q4LDE5 3571 aa3.7□□□□□ -1.82
CHD8-213ENST00000557364 TRRAPQ9Y4A5 3859 aa3.69□□□□□ -1.82
CHD8-213ENST00000557364 CSMD2Q7Z408 3487 aa3.68□□□□□ -1.82
CHD8-213ENST00000557364 CRCT1Q9UGL9 99 aa3.68□□□□□ -1.82
CHD8-213ENST00000557364 ANK3Q12955 4377 aaKnown RBP3.66□□□□□ -1.82
CHD8-213ENST00000557364 KRTAP12-3P60328 96 aa3.65□□□□□ -1.82
CHD8-213ENST00000557364 HUWE1Q7Z6Z7 4374 aaKnown RBP3.64□□□□□ -1.83
CHD8-213ENST00000557364 KRTAP3-3Q9BYR6 98 aa3.62□□□□□ -1.83
CHD8-213ENST00000557364 KRTAP4-5Q9BYR2 181 aa3.62□□□□□ -1.83
CHD8-213ENST00000557364 KRTAP3-2Q9BYR7 98 aa3.61□□□□□ -1.83
CHD8-213ENST00000557364 DNAH1Q9P2D7 4330 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms