RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 KRTAP12-2P59991 146 aa0.94□□□□□ -2.26
KTN1-224ENST00000556631 PTPN13Q12923 2485 aa0.94□□□□□ -2.26
KTN1-224ENST00000556631 TRANK1O15050 2925 aa0.93□□□□□ -2.26
KTN1-224ENST00000556631 ATMQ13315 3056 aa0.93□□□□□ -2.26
KTN1-224ENST00000556631 JMJD1CQ15652 2540 aa0.93□□□□□ -2.26
KTN1-224ENST00000556631 C2CD3Q4AC94 2353 aa0.93□□□□□ -2.26
KTN1-224ENST00000556631 A0A096LPF7 62 aa0.92□□□□□ -2.26
KTN1-224ENST00000556631 M0R2T5 61 aa0.92□□□□□ -2.26
KTN1-224ENST00000556631 S4R3F8 94 aa0.92□□□□□ -2.26
KTN1-224ENST00000556631 DNAH7Q8WXX0 4024 aa0.92□□□□□ -2.26
KTN1-224ENST00000556631 SPTA1P02549 2419 aa0.92□□□□□ -2.26
KTN1-224ENST00000556631 PKHD1P08F94 4074 aa0.92□□□□□ -2.26
KTN1-224ENST00000556631 WDR87Q6ZQQ6 2873 aa0.92□□□□□ -2.26
KTN1-224ENST00000556631 KMT2AQ03164 3969 aa0.92□□□□□ -2.26
KTN1-224ENST00000556631 CPAMD8Q8IZJ3 1885 aa0.91□□□□□ -2.26
KTN1-224ENST00000556631 NIPBLQ6KC79 2804 aaeCLIP0.91□□□□□ -2.26
KTN1-224ENST00000556631 CEP290O15078 2479 aa0.91□□□□□ -2.26
KTN1-224ENST00000556631 NCOR2Q9Y618 2525 aa0.91□□□□□ -2.26
KTN1-224ENST00000556631 C9orf92A6NGG3 77 aa0.91□□□□□ -2.26
KTN1-224ENST00000556631 DEFB136Q30KP8 78 aa0.91□□□□□ -2.26
KTN1-224ENST00000556631 DNHD1Q96M86 4753 aa0.9□□□□□ -2.26
KTN1-224ENST00000556631 USF3Q68DE3 2245 aa0.9□□□□□ -2.27
KTN1-224ENST00000556631 HIVEP2P31629 2446 aa0.9□□□□□ -2.27
KTN1-224ENST00000556631 FRAS1Q86XX4 4008 aa0.9□□□□□ -2.27
KTN1-224ENST00000556631 U3KQA8 63 aa0.9□□□□□ -2.27
KTN1-224ENST00000556631 PKD1L2Q7Z442 2459 aa0.9□□□□□ -2.27
KTN1-224ENST00000556631 CSPG4Q6UVK1 2322 aa0.9□□□□□ -2.27
KTN1-224ENST00000556631 KRTAP1-1Q07627 177 aa0.9□□□□□ -2.27
KTN1-224ENST00000556631 KRTAP13-4Q3LI77 160 aa0.9□□□□□ -2.27
KTN1-224ENST00000556631 CHD9Q3L8U1 2897 aa0.9□□□□□ -2.27
KTN1-224ENST00000556631 EP300Q09472 2414 aaPredicted RBP0.89□□□□□ -2.27
KTN1-224ENST00000556631 ABCA12Q86UK0 2595 aa0.89□□□□□ -2.27
KTN1-224ENST00000556631 CRYBG3Q68DQ2 2970 aa0.89□□□□□ -2.27
KTN1-224ENST00000556631 GVINP1Q7Z2Y8 2422 aa0.89□□□□□ -2.27
KTN1-224ENST00000556631 FAM186AA6NE01 2351 aa0.89□□□□□ -2.27
KTN1-224ENST00000556631 LINC01556Q5JQF7 62 aa0.88□□□□□ -2.27
KTN1-224ENST00000556631 CRCT1Q9UGL9 99 aa0.88□□□□□ -2.27
KTN1-224ENST00000556631 UBR4Q5T4S7 5183 aa0.88□□□□□ -2.27
KTN1-224ENST00000556631 KRTAP12-1P59990 96 aa0.88□□□□□ -2.27
KTN1-224ENST00000556631 KRTAP10-8P60410 259 aa0.88□□□□□ -2.27
KTN1-224ENST00000556631 MUC22E2RYF6 1773 aaPredicted RBP0.88□□□□□ -2.27
KTN1-224ENST00000556631 MAP1BP46821 2468 aaKnown RBP0.87□□□□□ -2.27
KTN1-224ENST00000556631 CELSR2Q9HCU4 2923 aa0.87□□□□□ -2.27
KTN1-224ENST00000556631 NAV2Q8IVL1 2488 aa0.87□□□□□ -2.27
KTN1-224ENST00000556631 RYR3Q15413 4870 aa0.87□□□□□ -2.27
KTN1-224ENST00000556631 H0YAA0 97 aa0.87□□□□□ -2.27
KTN1-224ENST00000556631 BIRC6Q9NR09 4857 aa0.87□□□□□ -2.27
KTN1-224ENST00000556631 HUWE1Q7Z6Z7 4374 aaKnown RBP0.87□□□□□ -2.27
KTN1-224ENST00000556631 K7EIL1 84 aa0.87□□□□□ -2.27
KTN1-224ENST00000556631 TTC28Q96AY4 2481 aa0.86□□□□□ -2.27
KTN1-224ENST00000556631 DYNC2H1Q8NCM8 4307 aaKnown RBP0.86□□□□□ -2.27
KTN1-224ENST00000556631 SONP18583 2426 aaKnown RBP0.86□□□□□ -2.27
KTN1-224ENST00000556631 PKHD1L1Q86WI1 4243 aa0.86□□□□□ -2.27
KTN1-224ENST00000556631 DNAH1Q9P2D7 4330 aa0.86□□□□□ -2.27
KTN1-224ENST00000556631 MUC6Q6W4X9 2439 aa0.86□□□□□ -2.27
KTN1-224ENST00000556631 OTOGQ6ZRI0 2925 aa0.85□□□□□ -2.27
KTN1-224ENST00000556631 MTORP42345 2549 aa0.85□□□□□ -2.27
KTN1-224ENST00000556631 RP1L1Q8IWN7 2480 aaPredicted RBP0.85□□□□□ -2.27
KTN1-224ENST00000556631 LCE1AQ5T7P2 110 aa0.85□□□□□ -2.27
KTN1-224ENST00000556631 LRP1BQ9NZR2 4599 aa0.85□□□□□ -2.27
KTN1-224ENST00000556631 OBSCNQ5VST9 7968 aa0.85□□□□□ -2.27
KTN1-224ENST00000556631 KRTAP1-4P0C5Y4 121 aa0.85□□□□□ -2.27
KTN1-224ENST00000556631 RYR2Q92736 4967 aa0.85□□□□□ -2.27
KTN1-224ENST00000556631 DMBT1Q9UGM3 2413 aaPredicted RBP0.85□□□□□ -2.27
KTN1-224ENST00000556631 MACF1Q9UPN3 7388 aaKnown RBP0.84□□□□□ -2.27
KTN1-224ENST00000556631 KRTAP10-11P60412 298 aa0.84□□□□□ -2.27
KTN1-224ENST00000556631 VPS13BQ7Z7G8 4022 aa0.84□□□□□ -2.27
KTN1-224ENST00000556631 PRRC2CQ9Y520 2896 aaKnown RBP0.84□□□□□ -2.28
KTN1-224ENST00000556631 CHD8Q9HCK8 2581 aa0.84□□□□□ -2.28
KTN1-224ENST00000556631 KMT2CQ8NEZ4 4911 aaKnown RBP0.84□□□□□ -2.28
KTN1-224ENST00000556631 COL27A1Q8IZC6 1860 aaPredicted RBP0.84□□□□□ -2.28
KTN1-224ENST00000556631 KRTAP1-5Q9BYS1 174 aa0.84□□□□□ -2.28
KTN1-224ENST00000556631 MEGF8Q7Z7M0 2845 aa0.84□□□□□ -2.28
KTN1-224ENST00000556631 RYR1P21817 5038 aa0.83□□□□□ -2.28
KTN1-224ENST00000556631 DEFB124Q8NES8 71 aa0.83□□□□□ -2.28
KTN1-224ENST00000556631 FAT2Q9NYQ8 4349 aa0.83□□□□□ -2.28
KTN1-224ENST00000556631 HYDINQ4G0P3 5121 aa0.83□□□□□ -2.28
KTN1-224ENST00000556631 ALMS1Q8TCU4 4167 aa0.83□□□□□ -2.28
KTN1-224ENST00000556631 DCHS2Q6V1P9 2916 aa0.83□□□□□ -2.28
KTN1-224ENST00000556631 KRTAP13-1Q8IUC0 172 aa0.82□□□□□ -2.28
KTN1-224ENST00000556631 SPG11Q96JI7 2443 aa0.82□□□□□ -2.28
KTN1-224ENST00000556631 DEFB1P60022 68 aa0.82□□□□□ -2.28
KTN1-224ENST00000556631 LCE1FQ5T754 118 aa0.82□□□□□ -2.28
KTN1-224ENST00000556631 CACNA1AO00555 2505 aa0.82□□□□□ -2.28
KTN1-224ENST00000556631 FBN3Q75N90 2809 aa0.82□□□□□ -2.28
KTN1-224ENST00000556631 PKD1P98161 4303 aa0.81□□□□□ -2.28
KTN1-224ENST00000556631 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
KTN1-224ENST00000556631 TNXBP22105 4242 aa0.81□□□□□ -2.28
KTN1-224ENST00000556631 BAHCC1Q9P281 2608 aa0.8□□□□□ -2.28
KTN1-224ENST00000556631 KRTAP13-3Q3SY46 172 aa0.8□□□□□ -2.28
KTN1-224ENST00000556631 VPS13DQ5THJ4 4388 aa0.8□□□□□ -2.28
KTN1-224ENST00000556631 HSPG2P98160 4391 aa0.8□□□□□ -2.28
KTN1-224ENST00000556631 KRTAP10-7P60409 375 aaPredicted RBP0.8□□□□□ -2.28
KTN1-224ENST00000556631 ITPR1Q14643 2758 aa0.8□□□□□ -2.28
KTN1-224ENST00000556631 SPTAN1Q13813 2472 aaKnown RBP0.79□□□□□ -2.28
KTN1-224ENST00000556631 CCDC168Q8NDH2 2452 aa0.79□□□□□ -2.28
KTN1-224ENST00000556631 ANKRD17O75179 2603 aaKnown RBP0.79□□□□□ -2.28
KTN1-224ENST00000556631 MXRA5Q9NR99 2828 aa0.79□□□□□ -2.28
KTN1-224ENST00000556631 ACANP16112 2415 aa0.79□□□□□ -2.28
KTN1-224ENST00000556631 MAP1AP78559 2803 aaPredicted RBP0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms