RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 FRAS1Q86XX4 4008 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 TRBV20-1A0A075B6N2 111 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 A0A0J9YY99 117 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 ZNF815PA8K554 130 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 IFITM1P13164 125 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 UBE2D3P61077 147 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 UBE2D2P62837 147 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 RPL39P62891 51 aaKnown RBP1.67□□□□□ -2.14
PSEN1-211ENST00000554995 FAM74A4Q5TZK3 123 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 ATP6V0E2Q8NHE4 81 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 SPANXDQ9BXN6 97 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 UBE2D4Q9Y2X8 147 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 DNAH10Q8IVF4 4471 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 TRGV1A0A0A0MS02 117 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 H3BUT2 72 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 J3QR89 54 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 NDUFA1O15239 70 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 IGHV3-30P01768 117 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 LINC00694P0DN24 101 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 IGHV3-30-5P0DP03 117 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 PRB4P10163 310 aaPredicted RBP1.66□□□□□ -2.14
PSEN1-211ENST00000554995 OCIAD2Q56VL3 154 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 TMEM170BQ5T4T1 132 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 SBSPONQ8IVN8 264 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 WFDC9Q8NEX5 89 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 PRO1854Q9UHT4 67 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 SPCS1Q9Y6A9 102 aa1.66□□□□□ -2.14
PSEN1-211ENST00000554995 NCR3O14931 201 aa1.65□□□□□ -2.15
PSEN1-211ENST00000554995 ASB16-AS1Q495Z4 193 aa1.65□□□□□ -2.15
PSEN1-211ENST00000554995 Q6ZUT4 128 aa1.65□□□□□ -2.15
PSEN1-211ENST00000554995 CDC42SE2Q9NRR3 84 aa1.65□□□□□ -2.15
PSEN1-211ENST00000554995 NDUFA12Q9UI09 145 aa1.65□□□□□ -2.15
PSEN1-211ENST00000554995 PRO0255Q9UI72 69 aa1.65□□□□□ -2.15
PSEN1-211ENST00000554995 TRBV30A0A0K0K1B3 111 aa1.64□□□□□ -2.15
PSEN1-211ENST00000554995 H3BNG1 76 aa1.64□□□□□ -2.15
PSEN1-211ENST00000554995 HTN1P15515 57 aa1.64□□□□□ -2.15
PSEN1-211ENST00000554995 KRTAP4-1Q9BYQ7 146 aa1.64□□□□□ -2.15
PSEN1-211ENST00000554995 NOP10Q9NPE3 64 aaKnown RBP1.64□□□□□ -2.15
PSEN1-211ENST00000554995 DNAH11Q96DT5 4516 aa1.64□□□□□ -2.15
PSEN1-211ENST00000554995 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.63□□□□□ -2.15
PSEN1-211ENST00000554995 TMEM262E9PQX1 116 aa1.63□□□□□ -2.15
PSEN1-211ENST00000554995 COX6CP09669 75 aa1.63□□□□□ -2.15
PSEN1-211ENST00000554995 COX17Q14061 63 aa1.63□□□□□ -2.15
PSEN1-211ENST00000554995 ATXN8Q156A1 80 aa1.63□□□□□ -2.15
PSEN1-211ENST00000554995 DEFB121Q5J5C9 76 aa1.63□□□□□ -2.15
PSEN1-211ENST00000554995 CDKN2A-AS1Q9UH64 79 aa1.63□□□□□ -2.15
PSEN1-211ENST00000554995 ERG28Q9UKR5 140 aa1.63□□□□□ -2.15
PSEN1-211ENST00000554995 DNAH8Q96JB1 4490 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 TRAV13-2A0A0B4J235 113 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 SPINK8P0C7L1 97 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 PDE6GP18545 87 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 MEIG1Q5JSS6 88 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 MUSTN1Q8IVN3 82 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 Q8IZM0 81 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 LINC00308Q8TCZ7 52 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 COX7B2Q8TF08 81 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 PPDPFLQ8WWR9 84 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 VPS25Q9BRG1 176 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 CRCT1Q9UGL9 99 aa1.62□□□□□ -2.15
PSEN1-211ENST00000554995 ALMS1Q8TCU4 4167 aa1.61□□□□□ -2.15
PSEN1-211ENST00000554995 GVQW2A0A096LPI5 108 aaPredicted RBP1.61□□□□□ -2.15
PSEN1-211ENST00000554995 LINC00959A0A1B0GUT2 108 aa1.61□□□□□ -2.15
PSEN1-211ENST00000554995 H0YGX0 51 aa1.61□□□□□ -2.15
PSEN1-211ENST00000554995 K7EIL1 84 aa1.61□□□□□ -2.15
PSEN1-211ENST00000554995 ACYP1P07311 99 aa1.61□□□□□ -2.15
PSEN1-211ENST00000554995 SPART-AS1P0CW21 52 aa1.61□□□□□ -2.15
PSEN1-211ENST00000554995 COX6A2Q02221 97 aa1.61□□□□□ -2.15
PSEN1-211ENST00000554995 WFDC2Q14508 124 aa1.61□□□□□ -2.15
PSEN1-211ENST00000554995 ETDBQ3ZM63 59 aa1.61□□□□□ -2.15
PSEN1-211ENST00000554995 LELP1Q5T871 98 aa1.61□□□□□ -2.15
PSEN1-211ENST00000554995 CSAG1Q6PB30 78 aa1.61□□□□□ -2.15
PSEN1-211ENST00000554995 DMBT1Q9UGM3 2413 aaPredicted RBP1.61□□□□□ -2.15
PSEN1-211ENST00000554995 PKD1P98161 4303 aa1.6□□□□□ -2.15
PSEN1-211ENST00000554995 A6NN06 94 aa1.6□□□□□ -2.15
PSEN1-211ENST00000554995 DEFB130BP0DP73 79 aa1.6□□□□□ -2.15
PSEN1-211ENST00000554995 DEFB130AP0DP74 79 aa1.6□□□□□ -2.15
PSEN1-211ENST00000554995 DEFB135Q30KP9 77 aa1.6□□□□□ -2.15
PSEN1-211ENST00000554995 STARD9Q9P2P6 4700 aa1.59□□□□□ -2.15
PSEN1-211ENST00000554995 A0A096LPF7 62 aa1.59□□□□□ -2.15
PSEN1-211ENST00000554995 SNCGO76070 127 aa1.59□□□□□ -2.15
PSEN1-211ENST00000554995 DEFB104AQ8WTQ1 72 aa1.59□□□□□ -2.15
PSEN1-211ENST00000554995 KMT2AQ03164 3969 aa1.59□□□□□ -2.16
PSEN1-211ENST00000554995 MUC2Q02817 5179 aa1.58□□□□□ -2.16
PSEN1-211ENST00000554995 FAT2Q9NYQ8 4349 aa1.58□□□□□ -2.16
PSEN1-211ENST00000554995 DNAH5Q8TE73 4624 aa1.58□□□□□ -2.16
PSEN1-211ENST00000554995 CCL18P55774 89 aa1.58□□□□□ -2.16
PSEN1-211ENST00000554995 LINC00158P58513 81 aa1.58□□□□□ -2.16
PSEN1-211ENST00000554995 LINC01556Q5JQF7 62 aa1.58□□□□□ -2.16
PSEN1-211ENST00000554995 LYPD5Q6UWN5 251 aa1.58□□□□□ -2.16
PSEN1-211ENST00000554995 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
PSEN1-211ENST00000554995 TRBV7-7A0A0K0K1E9 115 aa1.57□□□□□ -2.16
PSEN1-211ENST00000554995 RPL37AP61513 92 aaKnown RBP1.57□□□□□ -2.16
PSEN1-211ENST00000554995 C5orf38Q86SI9 138 aa1.57□□□□□ -2.16
PSEN1-211ENST00000554995 LINC00643Q86TS7 51 aa1.57□□□□□ -2.16
PSEN1-211ENST00000554995 SMIM11BQ8TCY0 68 aa1.57□□□□□ -2.16
PSEN1-211ENST00000554995 TOMM7Q9P0U1 55 aa1.57□□□□□ -2.16
PSEN1-211ENST00000554995 TEX49A0A1B0GTD5 131 aa1.56□□□□□ -2.16
PSEN1-211ENST00000554995 SPAG11BQ08648 103 aa1.56□□□□□ -2.16
PSEN1-211ENST00000554995 S100A7L2Q5SY68 101 aa1.56□□□□□ -2.16
PSEN1-211ENST00000554995 ENHOQ6UWT2 76 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms