RNA–Protein interactions for RNA: ENST00000553189.5

TMTC1-209, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 2

Gene TMTC1, Length 5,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-209ENST00000553189 TNRC18O15417 2968 aaPredicted RBP4.2□□□□□ -1.74
TMTC1-209ENST00000553189 FRYLO94915 3013 aa4.2□□□□□ -1.74
TMTC1-209ENST00000553189 MUC3AQ02505 3323 aa4.2□□□□□ -1.74
TMTC1-209ENST00000553189 ITPR1Q14643 2758 aa4.2□□□□□ -1.74
TMTC1-209ENST00000553189 A0A087X002 238 aa4.19□□□□□ -1.74
TMTC1-209ENST00000553189 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
TMTC1-209ENST00000553189 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
TMTC1-209ENST00000553189 UTP20O75691 2785 aaKnown RBP4.16□□□□□ -1.74
TMTC1-209ENST00000553189 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
TMTC1-209ENST00000553189 APCP25054 2843 aa4.15□□□□□ -1.74
TMTC1-209ENST00000553189 TPRXLQ17RH7 258 aa4.14□□□□□ -1.75
TMTC1-209ENST00000553189 DMXL2Q8TDJ6 3036 aa4.13□□□□□ -1.75
TMTC1-209ENST00000553189 A8MU10 97 aa4.12□□□□□ -1.75
TMTC1-209ENST00000553189 CRYBG3Q68DQ2 2970 aa4.12□□□□□ -1.75
TMTC1-209ENST00000553189 ADGRG4Q8IZF6 3080 aa4.11□□□□□ -1.75
TMTC1-209ENST00000553189 NOTCH2NLQ7Z3S9 236 aa4.1□□□□□ -1.75
TMTC1-209ENST00000553189 TACC2O95359 2948 aa4.1□□□□□ -1.75
TMTC1-209ENST00000553189 DMDP11532 3685 aa4.09□□□□□ -1.75
TMTC1-209ENST00000553189 CFAP47Q6ZTR5 3102 aa4.08□□□□□ -1.76
TMTC1-209ENST00000553189 LOC400499M0QZD8 3231 aa4.08□□□□□ -1.76
TMTC1-209ENST00000553189 LRBAP50851 2863 aa4.07□□□□□ -1.76
TMTC1-209ENST00000553189 BOD1L1Q8NFC6 3051 aa4.06□□□□□ -1.76
TMTC1-209ENST00000553189 TENM2Q9NT68 2774 aa4.06□□□□□ -1.76
TMTC1-209ENST00000553189 A8MUU9 505 aa4.05□□□□□ -1.76
TMTC1-209ENST00000553189 KRTAP10-10P60014 251 aa4.05□□□□□ -1.76
TMTC1-209ENST00000553189 KRTAP11-1Q8IUC1 163 aa4.05□□□□□ -1.76
TMTC1-209ENST00000553189 KRTAP13-2Q52LG2 175 aa4.03□□□□□ -1.76
TMTC1-209ENST00000553189 COL6A3P12111 3177 aa4.03□□□□□ -1.76
TMTC1-209ENST00000553189 ASPMQ8IZT6 3477 aa4.03□□□□□ -1.77
TMTC1-209ENST00000553189 ATMQ13315 3056 aa4.01□□□□□ -1.77
TMTC1-209ENST00000553189 NIPBLQ6KC79 2804 aaeCLIP4□□□□□ -1.77
TMTC1-209ENST00000553189 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
TMTC1-209ENST00000553189 TENM3Q9P273 2699 aa3.99□□□□□ -1.77
TMTC1-209ENST00000553189 XP32Q5T750 250 aa3.98□□□□□ -1.77
TMTC1-209ENST00000553189 FBN3Q75N90 2809 aa3.98□□□□□ -1.77
TMTC1-209ENST00000553189 COL12A1Q99715 3063 aa3.98□□□□□ -1.77
TMTC1-209ENST00000553189 KRTAP7-1Q8IUC3 87 aa3.97□□□□□ -1.77
TMTC1-209ENST00000553189 C10orf95Q9H7T3 257 aa3.97□□□□□ -1.77
TMTC1-209ENST00000553189 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
TMTC1-209ENST00000553189 ZZEF1O43149 2961 aa3.97□□□□□ -1.77
TMTC1-209ENST00000553189 TNP1P09430 55 aa3.97□□□□□ -1.77
TMTC1-209ENST00000553189 KRTAP13-1Q8IUC0 172 aa3.97□□□□□ -1.77
TMTC1-209ENST00000553189 TENM1Q9UKZ4 2725 aa3.97□□□□□ -1.77
TMTC1-209ENST00000553189 DMXL1Q9Y485 3027 aa3.96□□□□□ -1.78
TMTC1-209ENST00000553189 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
TMTC1-209ENST00000553189 DCHS1Q96JQ0 3298 aa3.93□□□□□ -1.78
TMTC1-209ENST00000553189 CELSR2Q9HCU4 2923 aa3.93□□□□□ -1.78
TMTC1-209ENST00000553189 ZFHX4Q86UP3 3567 aa3.92□□□□□ -1.78
TMTC1-209ENST00000553189 KRTAP1-4P0C5Y4 121 aa3.91□□□□□ -1.78
TMTC1-209ENST00000553189 KRTAP13-3Q3SY46 172 aa3.9□□□□□ -1.79
TMTC1-209ENST00000553189 ZANQ9Y493 2812 aa3.9□□□□□ -1.79
TMTC1-209ENST00000553189 MXRA5Q9NR99 2828 aa3.89□□□□□ -1.79
TMTC1-209ENST00000553189 P0C880 135 aa3.89□□□□□ -1.79
TMTC1-209ENST00000553189 LAMA5O15230 3695 aa3.88□□□□□ -1.79
TMTC1-209ENST00000553189 NF1P21359 2839 aa3.87□□□□□ -1.79
TMTC1-209ENST00000553189 H0YAA0 97 aa3.87□□□□□ -1.79
TMTC1-209ENST00000553189 SPENQ96T58 3664 aaKnown RBP3.86□□□□□ -1.79
TMTC1-209ENST00000553189 FBN2P35556 2912 aa3.85□□□□□ -1.79
TMTC1-209ENST00000553189 DCHS2Q6V1P9 2916 aa3.83□□□□□ -1.8
TMTC1-209ENST00000553189 SMG1Q96Q15 3661 aaKnown RBP3.81□□□□□ -1.8
TMTC1-209ENST00000553189 PKD1L1Q8TDX9 2849 aa3.8□□□□□ -1.8
TMTC1-209ENST00000553189 RELNP78509 3460 aa3.77□□□□□ -1.81
TMTC1-209ENST00000553189 PDZD2O15018 2839 aa3.77□□□□□ -1.81
TMTC1-209ENST00000553189 HRNRQ86YZ3 2850 aaPredicted RBP3.75□□□□□ -1.81
TMTC1-209ENST00000553189 KRTAP4-5Q9BYR2 181 aa3.74□□□□□ -1.81
TMTC1-209ENST00000553189 OTOGQ6ZRI0 2925 aa3.72□□□□□ -1.81
TMTC1-209ENST00000553189 SVEP1Q4LDE5 3571 aa3.71□□□□□ -1.82
TMTC1-209ENST00000553189 CSMD1Q96PZ7 3565 aa3.69□□□□□ -1.82
TMTC1-209ENST00000553189 CELSR1Q9NYQ6 3014 aa3.69□□□□□ -1.82
TMTC1-209ENST00000553189 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
TMTC1-209ENST00000553189 TGP01266 2768 aa3.66□□□□□ -1.82
TMTC1-209ENST00000553189 VWFP04275 2813 aa3.62□□□□□ -1.83
TMTC1-209ENST00000553189 CUBNO60494 3623 aa3.61□□□□□ -1.83
TMTC1-209ENST00000553189 KRTAP12-2P59991 146 aa3.59□□□□□ -1.84
TMTC1-209ENST00000553189 ZFHX3Q15911 3703 aa3.59□□□□□ -1.84
TMTC1-209ENST00000553189 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
TMTC1-209ENST00000553189 CSMD2Q7Z408 3487 aa3.57□□□□□ -1.84
TMTC1-209ENST00000553189 BSNQ9UPA5 3926 aa3.56□□□□□ -1.84
TMTC1-209ENST00000553189 FBN1P35555 2871 aaKnown RBP3.55□□□□□ -1.84
TMTC1-209ENST00000553189 VPS13CQ709C8 3753 aa3.53□□□□□ -1.84
TMTC1-209ENST00000553189 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
TMTC1-209ENST00000553189 SRRM2Q9UQ35 2752 aaKnown RBP3.5□□□□□ -1.85
TMTC1-209ENST00000553189 INE1O15225 51 aa3.46□□□□□ -1.85
TMTC1-209ENST00000553189 NBPF19A0A087WUL8 3843 aa3.45□□□□□ -1.86
TMTC1-209ENST00000553189 ALMS1Q8TCU4 4167 aa3.45□□□□□ -1.86
TMTC1-209ENST00000553189 LORP23490 312 aaPredicted RBP3.45□□□□□ -1.86
TMTC1-209ENST00000553189 KRTAP10-4P60372 401 aaPredicted RBP3.44□□□□□ -1.86
TMTC1-209ENST00000553189 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
TMTC1-209ENST00000553189 KRTAP3-1Q9BYR8 98 aa3.42□□□□□ -1.86
TMTC1-209ENST00000553189 KRTAP17-1Q9BYP8 105 aa3.4□□□□□ -1.87
TMTC1-209ENST00000553189 KRTAP23-1A1A580 65 aa3.39□□□□□ -1.87
TMTC1-209ENST00000553189 KRTAP10-6P60371 365 aaPredicted RBP3.37□□□□□ -1.87
TMTC1-209ENST00000553189 ANK3Q12955 4377 aaKnown RBP3.37□□□□□ -1.87
TMTC1-209ENST00000553189 COL7A1Q02388 2944 aa3.33□□□□□ -1.88
TMTC1-209ENST00000553189 MEGF8Q7Z7M0 2845 aa3.33□□□□□ -1.88
TMTC1-209ENST00000553189 KRTAP8-1Q8IUC2 63 aa3.32□□□□□ -1.88
TMTC1-209ENST00000553189 HUWE1Q7Z6Z7 4374 aaKnown RBP3.3□□□□□ -1.88
TMTC1-209ENST00000553189 AKAP9Q99996 3911 aa3.29□□□□□ -1.88
TMTC1-209ENST00000553189 DNHD1Q96M86 4753 aa3.27□□□□□ -1.89
TMTC1-209ENST00000553189 ZNF469Q96JG9 3925 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms