RNA–Protein interactions for RNA: ENST00000552864.5

LIN7A-204, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7A, Length 6,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-204ENST00000552864 DCHS2Q6V1P9 2916 aa4.13□□□□□ -1.75
LIN7A-204ENST00000552864 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
LIN7A-204ENST00000552864 MXRA5Q9NR99 2828 aa4.13□□□□□ -1.75
LIN7A-204ENST00000552864 NF1P21359 2839 aa4.13□□□□□ -1.75
LIN7A-204ENST00000552864 PDZD2O15018 2839 aa4.12□□□□□ -1.75
LIN7A-204ENST00000552864 KRTAP29-1A8MX34 341 aaPredicted RBP4.12□□□□□ -1.75
LIN7A-204ENST00000552864 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
LIN7A-204ENST00000552864 FLG2Q5D862 2391 aaPredicted RBP4.1□□□□□ -1.75
LIN7A-204ENST00000552864 LCA10Q71F78 164 aa4.09□□□□□ -1.75
LIN7A-204ENST00000552864 PLAC4Q8WY50 150 aa4.09□□□□□ -1.75
LIN7A-204ENST00000552864 KRTAP1-4P0C5Y4 121 aa4.09□□□□□ -1.75
LIN7A-204ENST00000552864 FBN2P35556 2912 aa4.09□□□□□ -1.75
LIN7A-204ENST00000552864 M0QZ58 72 aa4.08□□□□□ -1.76
LIN7A-204ENST00000552864 NOTCH2NLQ7Z3S9 236 aa4.08□□□□□ -1.76
LIN7A-204ENST00000552864 LOC400499M0QZD8 3231 aa4.07□□□□□ -1.76
LIN7A-204ENST00000552864 TPRXLQ17RH7 258 aa4.07□□□□□ -1.76
LIN7A-204ENST00000552864 LINC01558Q9Y6Z2 57 aa4.07□□□□□ -1.76
LIN7A-204ENST00000552864 Q1T7F1 81 aa4.07□□□□□ -1.76
LIN7A-204ENST00000552864 C20orf166-AS1Q96NR2 134 aa4.06□□□□□ -1.76
LIN7A-204ENST00000552864 CFAP47Q6ZTR5 3102 aa4.06□□□□□ -1.76
LIN7A-204ENST00000552864 A8MUU9 505 aa4.06□□□□□ -1.76
LIN7A-204ENST00000552864 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
LIN7A-204ENST00000552864 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
LIN7A-204ENST00000552864 SPEGQ15772 3267 aa4.04□□□□□ -1.76
LIN7A-204ENST00000552864 XP32Q5T750 250 aa4.02□□□□□ -1.77
LIN7A-204ENST00000552864 OTOGQ6ZRI0 2925 aa4.02□□□□□ -1.77
LIN7A-204ENST00000552864 TENM1Q9UKZ4 2725 aa4.02□□□□□ -1.77
LIN7A-204ENST00000552864 TENM3Q9P273 2699 aa4□□□□□ -1.77
LIN7A-204ENST00000552864 MYO15AQ9UKN7 3530 aa3.99□□□□□ -1.77
LIN7A-204ENST00000552864 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
LIN7A-204ENST00000552864 CELSR1Q9NYQ6 3014 aa3.95□□□□□ -1.78
LIN7A-204ENST00000552864 KRTAP13-3Q3SY46 172 aa3.94□□□□□ -1.78
LIN7A-204ENST00000552864 DCHS1Q96JQ0 3298 aa3.92□□□□□ -1.78
LIN7A-204ENST00000552864 RELNP78509 3460 aa3.92□□□□□ -1.78
LIN7A-204ENST00000552864 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
LIN7A-204ENST00000552864 NBPF19A0A087WUL8 3843 aa3.9□□□□□ -1.78
LIN7A-204ENST00000552864 CYSTM1Q9H1C7 97 aa3.9□□□□□ -1.78
LIN7A-204ENST00000552864 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
LIN7A-204ENST00000552864 Q5VV11 94 aa3.89□□□□□ -1.79
LIN7A-204ENST00000552864 SPATA8Q6RVD6 105 aa3.88□□□□□ -1.79
LIN7A-204ENST00000552864 PKD1L1Q8TDX9 2849 aa3.87□□□□□ -1.79
LIN7A-204ENST00000552864 ROMO1P60602 79 aa3.87□□□□□ -1.79
LIN7A-204ENST00000552864 FBN1P35555 2871 aaKnown RBP3.84□□□□□ -1.79
LIN7A-204ENST00000552864 ANK3Q12955 4377 aaKnown RBP3.84□□□□□ -1.79
LIN7A-204ENST00000552864 VWFP04275 2813 aa3.84□□□□□ -1.79
LIN7A-204ENST00000552864 KRTAP16-1A8MUX0 517 aa3.83□□□□□ -1.8
LIN7A-204ENST00000552864 MUC3AQ02505 3323 aa3.83□□□□□ -1.8
LIN7A-204ENST00000552864 KRTAP10-10P60014 251 aa3.83□□□□□ -1.8
LIN7A-204ENST00000552864 LAMA5O15230 3695 aa3.82□□□□□ -1.8
LIN7A-204ENST00000552864 TGP01266 2768 aa3.81□□□□□ -1.8
LIN7A-204ENST00000552864 WDFY3Q8IZQ1 3526 aa3.8□□□□□ -1.8
LIN7A-204ENST00000552864 ZFHX3Q15911 3703 aa3.79□□□□□ -1.8
LIN7A-204ENST00000552864 ASPMQ8IZT6 3477 aa3.78□□□□□ -1.8
LIN7A-204ENST00000552864 TNP1P09430 55 aa3.77□□□□□ -1.81
LIN7A-204ENST00000552864 DMDP11532 3685 aa3.76□□□□□ -1.81
LIN7A-204ENST00000552864 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
LIN7A-204ENST00000552864 FBN3Q75N90 2809 aa3.76□□□□□ -1.81
LIN7A-204ENST00000552864 A8MU10 97 aa3.74□□□□□ -1.81
LIN7A-204ENST00000552864 MT1HL1P0DM35 61 aa3.69□□□□□ -1.82
LIN7A-204ENST00000552864 SMG1Q96Q15 3661 aaKnown RBP3.69□□□□□ -1.82
LIN7A-204ENST00000552864 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
LIN7A-204ENST00000552864 ZFHX4Q86UP3 3567 aa3.67□□□□□ -1.82
LIN7A-204ENST00000552864 CSMD1Q96PZ7 3565 aa3.64□□□□□ -1.83
LIN7A-204ENST00000552864 KRTAP4-5Q9BYR2 181 aa3.63□□□□□ -1.83
LIN7A-204ENST00000552864 KRTAP10-4P60372 401 aaPredicted RBP3.62□□□□□ -1.83
LIN7A-204ENST00000552864 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
LIN7A-204ENST00000552864 ALMS1Q8TCU4 4167 aa3.61□□□□□ -1.83
LIN7A-204ENST00000552864 BSNQ9UPA5 3926 aa3.61□□□□□ -1.83
LIN7A-204ENST00000552864 CSMD2Q7Z408 3487 aa3.61□□□□□ -1.83
LIN7A-204ENST00000552864 P0C880 135 aa3.59□□□□□ -1.83
LIN7A-204ENST00000552864 TRRAPQ9Y4A5 3859 aa3.59□□□□□ -1.84
LIN7A-204ENST00000552864 H0YAA0 97 aa3.58□□□□□ -1.84
LIN7A-204ENST00000552864 KRTAP25-1Q3LHN0 102 aa3.58□□□□□ -1.84
LIN7A-204ENST00000552864 SPENQ96T58 3664 aaKnown RBP3.58□□□□□ -1.84
LIN7A-204ENST00000552864 HUWE1Q7Z6Z7 4374 aaKnown RBP3.57□□□□□ -1.84
LIN7A-204ENST00000552864 MEGF8Q7Z7M0 2845 aa3.56□□□□□ -1.84
LIN7A-204ENST00000552864 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
LIN7A-204ENST00000552864 SRRM2Q9UQ35 2752 aaKnown RBP3.53□□□□□ -1.84
LIN7A-204ENST00000552864 A6NN06 94 aa3.53□□□□□ -1.84
LIN7A-204ENST00000552864 COL7A1Q02388 2944 aa3.52□□□□□ -1.85
LIN7A-204ENST00000552864 KRTAP3-1Q9BYR8 98 aa3.46□□□□□ -1.85
LIN7A-204ENST00000552864 DNAH9Q9NYC9 4486 aa3.46□□□□□ -1.86
LIN7A-204ENST00000552864 C10orf95Q9H7T3 257 aa3.46□□□□□ -1.86
LIN7A-204ENST00000552864 AKAP9Q99996 3911 aa3.45□□□□□ -1.86
LIN7A-204ENST00000552864 SVEP1Q4LDE5 3571 aa3.43□□□□□ -1.86
LIN7A-204ENST00000552864 CUBNO60494 3623 aa3.43□□□□□ -1.86
LIN7A-204ENST00000552864 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
LIN7A-204ENST00000552864 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
LIN7A-204ENST00000552864 DNAH1Q9P2D7 4330 aa3.37□□□□□ -1.87
LIN7A-204ENST00000552864 DNHD1Q96M86 4753 aa3.37□□□□□ -1.87
LIN7A-204ENST00000552864 KRTAP12-1P59990 96 aa3.36□□□□□ -1.87
LIN7A-204ENST00000552864 DNAH11Q96DT5 4516 aa3.36□□□□□ -1.87
LIN7A-204ENST00000552864 ZNF469Q96JG9 3925 aaPredicted RBP3.34□□□□□ -1.88
LIN7A-204ENST00000552864 DNAH5Q8TE73 4624 aa3.33□□□□□ -1.88
LIN7A-204ENST00000552864 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
LIN7A-204ENST00000552864 DNAH10Q8IVF4 4471 aa3.32□□□□□ -1.88
LIN7A-204ENST00000552864 VPS13CQ709C8 3753 aa3.3□□□□□ -1.88
LIN7A-204ENST00000552864 PLECQ15149 4684 aaKnown RBP3.28□□□□□ -1.88
LIN7A-204ENST00000552864 KRTAP3-3Q9BYR6 98 aa3.27□□□□□ -1.89
LIN7A-204ENST00000552864 VPS13DQ5THJ4 4388 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms