RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 C8orf17Q9NRJ1 99 aa4.69□□□□□ -1.66
CHPT1-208ENST00000552215 EPPK1P58107 5090 aaKnown RBP4.69□□□□□ -1.66
CHPT1-208ENST00000552215 ATOX1O00244 68 aa4.69□□□□□ -1.66
CHPT1-208ENST00000552215 DNAH8Q96JB1 4490 aa4.68□□□□□ -1.66
CHPT1-208ENST00000552215 CXCL6P80162 114 aa4.68□□□□□ -1.66
CHPT1-208ENST00000552215 CCDC179H3BU77 68 aa4.67□□□□□ -1.66
CHPT1-208ENST00000552215 LINC01600Q96MT4 127 aa4.66□□□□□ -1.66
CHPT1-208ENST00000552215 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
CHPT1-208ENST00000552215 LINC00472Q9H8W2 130 aa4.66□□□□□ -1.66
CHPT1-208ENST00000552215 IGLV8-61A0A075B6I0 122 aa4.66□□□□□ -1.66
CHPT1-208ENST00000552215 H0Y9P7 68 aa4.66□□□□□ -1.66
CHPT1-208ENST00000552215 KRTAP17-1Q9BYP8 105 aa4.65□□□□□ -1.66
CHPT1-208ENST00000552215 VPS13BQ7Z7G8 4022 aa4.65□□□□□ -1.66
CHPT1-208ENST00000552215 ATP11AUNQ6ZP68 121 aa4.65□□□□□ -1.67
CHPT1-208ENST00000552215 APOBP04114 4563 aaKnown RBP4.65□□□□□ -1.67
CHPT1-208ENST00000552215 MRPL34Q9BQ48 92 aaKnown RBP4.65□□□□□ -1.67
CHPT1-208ENST00000552215 HECTD4Q9Y4D8 3996 aa4.64□□□□□ -1.67
CHPT1-208ENST00000552215 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
CHPT1-208ENST00000552215 FAM236DA0A1B0GTK5 79 aa4.63□□□□□ -1.67
CHPT1-208ENST00000552215 FAM236CP0DP71 79 aa4.63□□□□□ -1.67
CHPT1-208ENST00000552215 LRP1Q07954 4544 aaKnown RBP4.62□□□□□ -1.67
CHPT1-208ENST00000552215 C1orf64Q8NEQ6 169 aa4.62□□□□□ -1.67
CHPT1-208ENST00000552215 MYCBP2O75592 4640 aa4.62□□□□□ -1.67
CHPT1-208ENST00000552215 SERP2Q8N6R1 65 aa4.62□□□□□ -1.67
CHPT1-208ENST00000552215 IMUPQ9GZP8 106 aa4.62□□□□□ -1.67
CHPT1-208ENST00000552215 CD164Q04900 197 aa4.61□□□□□ -1.67
CHPT1-208ENST00000552215 FAT2Q9NYQ8 4349 aa4.6□□□□□ -1.67
CHPT1-208ENST00000552215 FAT3Q8TDW7 4589 aa4.59□□□□□ -1.67
CHPT1-208ENST00000552215 A0A1B0GW54 56 aa4.59□□□□□ -1.67
CHPT1-208ENST00000552215 MMP24-AS1A0A0U1RRL7 71 aa4.59□□□□□ -1.68
CHPT1-208ENST00000552215 TMEM254Q8TBM7 123 aa4.59□□□□□ -1.68
CHPT1-208ENST00000552215 TRAV7A0A075B6U4 112 aa4.58□□□□□ -1.68
CHPT1-208ENST00000552215 TRAV22A0A0B4J277 110 aa4.57□□□□□ -1.68
CHPT1-208ENST00000552215 COX7CP15954 63 aa4.57□□□□□ -1.68
CHPT1-208ENST00000552215 KRTAP10-4P60372 401 aaPredicted RBP4.57□□□□□ -1.68
CHPT1-208ENST00000552215 COX6B2Q6YFQ2 88 aa4.57□□□□□ -1.68
CHPT1-208ENST00000552215 CHKB-CPT1BH3BT56 60 aa4.56□□□□□ -1.68
CHPT1-208ENST00000552215 C8orf87E5RJ46 101 aa4.56□□□□□ -1.68
CHPT1-208ENST00000552215 OXTP01178 125 aa4.55□□□□□ -1.68
CHPT1-208ENST00000552215 UQCRQO14949 82 aa4.55□□□□□ -1.68
CHPT1-208ENST00000552215 C4orf26Q17RF5 130 aa4.55□□□□□ -1.68
CHPT1-208ENST00000552215 PKD1P98161 4303 aa4.54□□□□□ -1.68
CHPT1-208ENST00000552215 KRTAP10-8P60410 259 aa4.54□□□□□ -1.68
CHPT1-208ENST00000552215 SMIM20Q8N5G0 67 aa4.54□□□□□ -1.68
CHPT1-208ENST00000552215 Q8N9P0 234 aaPredicted RBP4.53□□□□□ -1.68
CHPT1-208ENST00000552215 Q5W150 140 aa4.52□□□□□ -1.69
CHPT1-208ENST00000552215 HERC2O95714 4834 aa4.52□□□□□ -1.69
CHPT1-208ENST00000552215 C5orf47Q569G3 176 aa4.51□□□□□ -1.69
CHPT1-208ENST00000552215 C7orf65Q6ZTY9 151 aa4.51□□□□□ -1.69
CHPT1-208ENST00000552215 MT1HL1P0DM35 61 aa4.5□□□□□ -1.69
CHPT1-208ENST00000552215 TP53AIP1Q9HCN2 124 aa4.5□□□□□ -1.69
CHPT1-208ENST00000552215 SPINK7P58062 85 aa4.49□□□□□ -1.69
CHPT1-208ENST00000552215 HSPG2P98160 4391 aa4.48□□□□□ -1.69
CHPT1-208ENST00000552215 OCR1Q9BZK8 76 aa4.48□□□□□ -1.69
CHPT1-208ENST00000552215 MPLKIPQ8TAP9 179 aa4.48□□□□□ -1.69
CHPT1-208ENST00000552215 CYSTM1Q9H1C7 97 aa4.47□□□□□ -1.69
CHPT1-208ENST00000552215 ZCCHC13Q8WW36 166 aaKnown RBP4.47□□□□□ -1.69
CHPT1-208ENST00000552215 KRTAP29-1A8MX34 341 aaPredicted RBP4.46□□□□□ -1.7
CHPT1-208ENST00000552215 XP32Q5T750 250 aa4.44□□□□□ -1.7
CHPT1-208ENST00000552215 ABCA13Q86UQ4 5058 aa4.44□□□□□ -1.7
CHPT1-208ENST00000552215 BIRC6Q9NR09 4857 aa4.43□□□□□ -1.7
CHPT1-208ENST00000552215 M0R2T5 61 aa4.43□□□□□ -1.7
CHPT1-208ENST00000552215 FP248Q71RG6 208 aaPredicted RBP4.43□□□□□ -1.7
CHPT1-208ENST00000552215 LOC101927531A0A1B0GV80 90 aa4.41□□□□□ -1.7
CHPT1-208ENST00000552215 HRES1P13985 223 aa4.41□□□□□ -1.7
CHPT1-208ENST00000552215 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
CHPT1-208ENST00000552215 ASB16-AS1Q495Z4 193 aa4.4□□□□□ -1.7
CHPT1-208ENST00000552215 Q5XG85 94 aa4.4□□□□□ -1.71
CHPT1-208ENST00000552215 CYP4F30PQ9H0H9 118 aa4.39□□□□□ -1.71
CHPT1-208ENST00000552215 RPS29P62273 56 aaKnown RBP4.39□□□□□ -1.71
CHPT1-208ENST00000552215 KRTAP13-3Q3SY46 172 aa4.39□□□□□ -1.71
CHPT1-208ENST00000552215 RBM12B-AS1Q9P1G2 102 aa4.38□□□□□ -1.71
CHPT1-208ENST00000552215 A0A0U1RQV1 116 aa4.37□□□□□ -1.71
CHPT1-208ENST00000552215 KLKP1Q107X0 134 aa4.37□□□□□ -1.71
CHPT1-208ENST00000552215 RPL37P61927 97 aaKnown RBP4.36□□□□□ -1.71
CHPT1-208ENST00000552215 H7BZZ5 65 aa4.36□□□□□ -1.71
CHPT1-208ENST00000552215 NDUFC1O43677 76 aa4.35□□□□□ -1.71
CHPT1-208ENST00000552215 HERC1Q15751 4861 aa4.35□□□□□ -1.71
CHPT1-208ENST00000552215 LRP2P98164 4655 aa4.35□□□□□ -1.71
CHPT1-208ENST00000552215 PSPHP1O15172 72 aa4.35□□□□□ -1.71
CHPT1-208ENST00000552215 TMEM258P61165 79 aa4.34□□□□□ -1.71
CHPT1-208ENST00000552215 KRTAP16-1A8MUX0 517 aa4.34□□□□□ -1.72
CHPT1-208ENST00000552215 ACYP2P14621 99 aa4.33□□□□□ -1.72
CHPT1-208ENST00000552215 Q75L30 129 aa4.32□□□□□ -1.72
CHPT1-208ENST00000552215 A8MUU9 505 aa4.32□□□□□ -1.72
CHPT1-208ENST00000552215 COA5Q86WW8 74 aa4.32□□□□□ -1.72
CHPT1-208ENST00000552215 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
CHPT1-208ENST00000552215 SEC61GP60059 68 aa4.31□□□□□ -1.72
CHPT1-208ENST00000552215 TPRXLQ17RH7 258 aa4.31□□□□□ -1.72
CHPT1-208ENST00000552215 H3BPC8 53 aa4.3□□□□□ -1.72
CHPT1-208ENST00000552215 C20orf166-AS1Q96NR2 134 aa4.3□□□□□ -1.72
CHPT1-208ENST00000552215 LPAP08519 4548 aa4.3□□□□□ -1.72
CHPT1-208ENST00000552215 LINC01554Q52M75 96 aa4.29□□□□□ -1.72
CHPT1-208ENST00000552215 PRR15LQ9BU68 103 aa4.28□□□□□ -1.72
CHPT1-208ENST00000552215 LORP23490 312 aaPredicted RBP4.27□□□□□ -1.73
CHPT1-208ENST00000552215 SERP1Q9Y6X1 66 aa4.27□□□□□ -1.73
CHPT1-208ENST00000552215 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
CHPT1-208ENST00000552215 S4R3F8 94 aa4.22□□□□□ -1.73
CHPT1-208ENST00000552215 PKHD1L1Q86WI1 4243 aa4.21□□□□□ -1.74
CHPT1-208ENST00000552215 MUC2Q02817 5179 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms