RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 J3KT08 172 aa5.51□□□□□ -1.53
VTI1BP3-201ENST00000550220 DEFB116Q30KQ4 102 aa5.51□□□□□ -1.53
VTI1BP3-201ENST00000550220 C9JAW5 83 aa5.5□□□□□ -1.53
VTI1BP3-201ENST00000550220 VPS25Q9BRG1 176 aa5.5□□□□□ -1.53
VTI1BP3-201ENST00000550220 LOC105371267A0A1B0GV96 52 aa5.49□□□□□ -1.53
VTI1BP3-201ENST00000550220 A0A1B0GVX0 72 aa5.49□□□□□ -1.53
VTI1BP3-201ENST00000550220 BAALC-AS2P0C853 105 aa5.49□□□□□ -1.53
VTI1BP3-201ENST00000550220 NOTCH2NLQ7Z3S9 236 aa5.49□□□□□ -1.53
VTI1BP3-201ENST00000550220 A0A1B0GW54 56 aa5.48□□□□□ -1.53
VTI1BP3-201ENST00000550220 MTURNQ8N3F0 131 aa5.48□□□□□ -1.53
VTI1BP3-201ENST00000550220 H3BS24 57 aa5.47□□□□□ -1.53
VTI1BP3-201ENST00000550220 NDUFB1O75438 58 aa5.47□□□□□ -1.53
VTI1BP3-201ENST00000550220 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
VTI1BP3-201ENST00000550220 JMJD7-PLA2G4BH0Y9G9 81 aa5.46□□□□□ -1.54
VTI1BP3-201ENST00000550220 MPLKIPQ8TAP9 179 aa5.46□□□□□ -1.54
VTI1BP3-201ENST00000550220 HRES1P13985 223 aa5.45□□□□□ -1.54
VTI1BP3-201ENST00000550220 PDE6GP18545 87 aa5.45□□□□□ -1.54
VTI1BP3-201ENST00000550220 Q6ZQT0 140 aa5.45□□□□□ -1.54
VTI1BP3-201ENST00000550220 M0R143 59 aa5.44□□□□□ -1.54
VTI1BP3-201ENST00000550220 SMIM6P0DI80 62 aa5.44□□□□□ -1.54
VTI1BP3-201ENST00000550220 ATXN8Q156A1 80 aa5.44□□□□□ -1.54
VTI1BP3-201ENST00000550220 ZCCHC13Q8WW36 166 aaKnown RBP5.43□□□□□ -1.54
VTI1BP3-201ENST00000550220 LOC110117498A0A087WWA1 95 aa5.41□□□□□ -1.54
VTI1BP3-201ENST00000550220 Q8N9P0 234 aaPredicted RBP5.41□□□□□ -1.54
VTI1BP3-201ENST00000550220 A8MWP4 228 aa5.4□□□□□ -1.54
VTI1BP3-201ENST00000550220 SPINK7P58062 85 aa5.4□□□□□ -1.54
VTI1BP3-201ENST00000550220 LYRM7Q5U5X0 104 aa5.39□□□□□ -1.55
VTI1BP3-201ENST00000550220 MT2AP02795 61 aa5.38□□□□□ -1.55
VTI1BP3-201ENST00000550220 C8orf17Q9NRJ1 99 aa5.37□□□□□ -1.55
VTI1BP3-201ENST00000550220 TSTD3H0UI37 97 aa5.36□□□□□ -1.55
VTI1BP3-201ENST00000550220 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
VTI1BP3-201ENST00000550220 NREPQ16612 68 aa5.35□□□□□ -1.55
VTI1BP3-201ENST00000550220 IGKV3D-7A0A0C4DH55 119 aa5.34□□□□□ -1.55
VTI1BP3-201ENST00000550220 Q6ZVQ6 151 aa5.34□□□□□ -1.55
VTI1BP3-201ENST00000550220 PRR15Q8IV56 129 aa5.34□□□□□ -1.55
VTI1BP3-201ENST00000550220 C14orf132Q9NPU4 83 aa5.33□□□□□ -1.56
VTI1BP3-201ENST00000550220 MT1FP04733 61 aa5.32□□□□□ -1.56
VTI1BP3-201ENST00000550220 NAA38Q9BRA0 125 aaKnown RBP5.32□□□□□ -1.56
VTI1BP3-201ENST00000550220 USH2AO75445 5202 aa5.32□□□□□ -1.56
VTI1BP3-201ENST00000550220 TMEM254Q8TBM7 123 aa5.31□□□□□ -1.56
VTI1BP3-201ENST00000550220 KRTAP9-3Q9BYQ3 159 aa5.31□□□□□ -1.56
VTI1BP3-201ENST00000550220 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
VTI1BP3-201ENST00000550220 WFDC13Q8IUB5 93 aa5.3□□□□□ -1.56
VTI1BP3-201ENST00000550220 MRPL34Q9BQ48 92 aaKnown RBP5.29□□□□□ -1.56
VTI1BP3-201ENST00000550220 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
VTI1BP3-201ENST00000550220 LINC00846Q9NV44 126 aa5.28□□□□□ -1.56
VTI1BP3-201ENST00000550220 SSPOA2VEC9 5147 aa5.28□□□□□ -1.56
VTI1BP3-201ENST00000550220 hDV103S1A0JD37 113 aa5.27□□□□□ -1.57
VTI1BP3-201ENST00000550220 H3BT86 120 aa5.27□□□□□ -1.57
VTI1BP3-201ENST00000550220 MMP24-AS1A0A0U1RRL7 71 aa5.26□□□□□ -1.57
VTI1BP3-201ENST00000550220 PCP4L1A6NKN8 68 aa5.25□□□□□ -1.57
VTI1BP3-201ENST00000550220 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
VTI1BP3-201ENST00000550220 NDUFS5O43920 106 aa5.25□□□□□ -1.57
VTI1BP3-201ENST00000550220 BATFQ16520 125 aa5.25□□□□□ -1.57
VTI1BP3-201ENST00000550220 C9orf118A6NHY6 69 aa5.24□□□□□ -1.57
VTI1BP3-201ENST00000550220 BPY2O14599 106 aa5.24□□□□□ -1.57
VTI1BP3-201ENST00000550220 H1FX-AS1Q4G0G2 97 aa5.23□□□□□ -1.57
VTI1BP3-201ENST00000550220 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
VTI1BP3-201ENST00000550220 K7EQZ3 153 aa5.22□□□□□ -1.57
VTI1BP3-201ENST00000550220 A0A1W2PPM0 123 aa5.21□□□□□ -1.58
VTI1BP3-201ENST00000550220 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
VTI1BP3-201ENST00000550220 C7orf65Q6ZTY9 151 aa5.19□□□□□ -1.58
VTI1BP3-201ENST00000550220 IGKV2D-30A0A075B6S6 120 aa5.18□□□□□ -1.58
VTI1BP3-201ENST00000550220 TAX1BP3O14907 124 aa5.18□□□□□ -1.58
VTI1BP3-201ENST00000550220 IGKV2-30P06310 120 aa5.18□□□□□ -1.58
VTI1BP3-201ENST00000550220 MACF1Q9UPN3 7388 aaKnown RBP5.17□□□□□ -1.58
VTI1BP3-201ENST00000550220 CASC2Q6XLA1 102 aa5.17□□□□□ -1.58
VTI1BP3-201ENST00000550220 KRTAP4-12Q9BQ66 201 aa5.17□□□□□ -1.58
VTI1BP3-201ENST00000550220 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
VTI1BP3-201ENST00000550220 CXCL6P80162 114 aa5.16□□□□□ -1.58
VTI1BP3-201ENST00000550220 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.59
VTI1BP3-201ENST00000550220 COL5A1-AS1Q5SY13 56 aa5.15□□□□□ -1.59
VTI1BP3-201ENST00000550220 Q5W150 140 aa5.14□□□□□ -1.59
VTI1BP3-201ENST00000550220 SPCS1Q9Y6A9 102 aa5.14□□□□□ -1.59
VTI1BP3-201ENST00000550220 HCG22E2RYF7 251 aa5.13□□□□□ -1.59
VTI1BP3-201ENST00000550220 UBL5Q9BZL1 73 aa5.13□□□□□ -1.59
VTI1BP3-201ENST00000550220 Q8N9L7 120 aa5.11□□□□□ -1.59
VTI1BP3-201ENST00000550220 LCE3BQ5TA77 95 aa5.1□□□□□ -1.59
VTI1BP3-201ENST00000550220 C4orf26Q17RF5 130 aa5.08□□□□□ -1.6
VTI1BP3-201ENST00000550220 TP53AIP1Q9HCN2 124 aa5.06□□□□□ -1.6
VTI1BP3-201ENST00000550220 K7EP34 96 aa5.03□□□□□ -1.6
VTI1BP3-201ENST00000550220 CSAG1Q6PB30 78 aa5.03□□□□□ -1.6
VTI1BP3-201ENST00000550220 GTF2H5Q6ZYL4 71 aa5.03□□□□□ -1.6
VTI1BP3-201ENST00000550220 PRO0461Q9UI25 63 aa5.03□□□□□ -1.6
VTI1BP3-201ENST00000550220 FAM236AA0A1B0GUQ0 79 aa5.01□□□□□ -1.61
VTI1BP3-201ENST00000550220 FAM236BA0A1B0GV22 79 aa5.01□□□□□ -1.61
VTI1BP3-201ENST00000550220 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
VTI1BP3-201ENST00000550220 C5orf47Q569G3 176 aa5.01□□□□□ -1.61
VTI1BP3-201ENST00000550220 C1orf64Q8NEQ6 169 aa5.01□□□□□ -1.61
VTI1BP3-201ENST00000550220 S4R3F8 94 aa5.01□□□□□ -1.61
VTI1BP3-201ENST00000550220 F8W1H4 67 aa4.98□□□□□ -1.61
VTI1BP3-201ENST00000550220 KRTAP3-1Q9BYR8 98 aa4.98□□□□□ -1.61
VTI1BP3-201ENST00000550220 A0A1B0GV90 55 aa4.96□□□□□ -1.62
VTI1BP3-201ENST00000550220 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
VTI1BP3-201ENST00000550220 LCA10Q71F78 164 aa4.95□□□□□ -1.62
VTI1BP3-201ENST00000550220 Q5VV11 94 aa4.93□□□□□ -1.62
VTI1BP3-201ENST00000550220 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
VTI1BP3-201ENST00000550220 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
VTI1BP3-201ENST00000550220 ETDBQ3ZM63 59 aa4.92□□□□□ -1.62
VTI1BP3-201ENST00000550220 SPRR2GQ9BYE4 73 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms