RNA–Protein interactions for RNA: ENST00000549917.1

PPFIA2-217, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-217ENST00000549917 CELSR1Q9NYQ6 3014 aa1.34□□□□□ -2.2
PPFIA2-217ENST00000549917 NBASA2RRP1 2371 aa1.33□□□□□ -2.2
PPFIA2-217ENST00000549917 DEFB1P60022 68 aa1.33□□□□□ -2.2
PPFIA2-217ENST00000549917 STATHP02808 62 aa1.32□□□□□ -2.2
PPFIA2-217ENST00000549917 ATRQ13535 2644 aa1.32□□□□□ -2.2
PPFIA2-217ENST00000549917 CHD8Q9HCK8 2581 aa1.31□□□□□ -2.2
PPFIA2-217ENST00000549917 MGAQ8IWI9 3026 aa1.31□□□□□ -2.2
PPFIA2-217ENST00000549917 CCDC168Q8NDH2 2452 aa1.31□□□□□ -2.2
PPFIA2-217ENST00000549917 U3KQA8 63 aa1.3□□□□□ -2.2
PPFIA2-217ENST00000549917 AKAP13Q12802 2813 aa1.3□□□□□ -2.2
PPFIA2-217ENST00000549917 CEP250Q9BV73 2442 aa1.29□□□□□ -2.2
PPFIA2-217ENST00000549917 CHD6Q8TD26 2715 aa1.28□□□□□ -2.2
PPFIA2-217ENST00000549917 VPS13DQ5THJ4 4388 aa1.28□□□□□ -2.2
PPFIA2-217ENST00000549917 FAM186AA6NE01 2351 aa1.27□□□□□ -2.21
PPFIA2-217ENST00000549917 BSNQ9UPA5 3926 aa1.27□□□□□ -2.21
PPFIA2-217ENST00000549917 H3BNG1 76 aa1.27□□□□□ -2.21
PPFIA2-217ENST00000549917 A0A096LNI7 61 aa1.25□□□□□ -2.21
PPFIA2-217ENST00000549917 RPS29P62273 56 aaKnown RBP1.25□□□□□ -2.21
PPFIA2-217ENST00000549917 KRTAP8-1Q8IUC2 63 aa1.25□□□□□ -2.21
PPFIA2-217ENST00000549917 BDP1A6H8Y1 2624 aa1.25□□□□□ -2.21
PPFIA2-217ENST00000549917 EPG5Q9HCE0 2579 aa1.25□□□□□ -2.21
PPFIA2-217ENST00000549917 MAP1BP46821 2468 aaKnown RBP1.25□□□□□ -2.21
PPFIA2-217ENST00000549917 DEFB136Q30KP8 78 aa1.24□□□□□ -2.21
PPFIA2-217ENST00000549917 DNAH11Q96DT5 4516 aa1.23□□□□□ -2.21
PPFIA2-217ENST00000549917 HIVEP3Q5T1R4 2406 aa1.23□□□□□ -2.21
PPFIA2-217ENST00000549917 TNRC18O15417 2968 aaPredicted RBP1.23□□□□□ -2.21
PPFIA2-217ENST00000549917 DEFB110Q30KQ9 67 aa1.23□□□□□ -2.21
PPFIA2-217ENST00000549917 DEFB108BQ8NET1 73 aa1.23□□□□□ -2.21
PPFIA2-217ENST00000549917 RIF1Q5UIP0 2472 aaKnown RBP1.22□□□□□ -2.21
PPFIA2-217ENST00000549917 USP24Q9UPU5 2620 aa1.21□□□□□ -2.22
PPFIA2-217ENST00000549917 LINC01556Q5JQF7 62 aa1.21□□□□□ -2.22
PPFIA2-217ENST00000549917 NBPF19A0A087WUL8 3843 aa1.2□□□□□ -2.22
PPFIA2-217ENST00000549917 PIEZO1Q92508 2521 aa1.2□□□□□ -2.22
PPFIA2-217ENST00000549917 ANK2Q01484 3957 aa1.2□□□□□ -2.22
PPFIA2-217ENST00000549917 PRKDCP78527 4128 aaKnown RBP1.2□□□□□ -2.22
PPFIA2-217ENST00000549917 FBN2P35556 2912 aa1.19□□□□□ -2.22
PPFIA2-217ENST00000549917 SACSQ9NZJ4 4579 aa1.19□□□□□ -2.22
PPFIA2-217ENST00000549917 MTORP42345 2549 aa1.19□□□□□ -2.22
PPFIA2-217ENST00000549917 LYSTQ99698 3801 aa1.19□□□□□ -2.22
PPFIA2-217ENST00000549917 KMT2AQ03164 3969 aa1.18□□□□□ -2.22
PPFIA2-217ENST00000549917 APCP25054 2843 aa1.18□□□□□ -2.22
PPFIA2-217ENST00000549917 ZFHX4Q86UP3 3567 aa1.18□□□□□ -2.22
PPFIA2-217ENST00000549917 VPS13BQ7Z7G8 4022 aa1.18□□□□□ -2.22
PPFIA2-217ENST00000549917 CRYBG3Q68DQ2 2970 aa1.17□□□□□ -2.22
PPFIA2-217ENST00000549917 FLNCQ14315 2725 aa1.17□□□□□ -2.22
PPFIA2-217ENST00000549917 PTPN13Q12923 2485 aa1.17□□□□□ -2.22
PPFIA2-217ENST00000549917 LRRK2Q5S007 2527 aa1.17□□□□□ -2.22
PPFIA2-217ENST00000549917 FRYQ5TBA9 3013 aa1.16□□□□□ -2.22
PPFIA2-217ENST00000549917 PRM1P04553 51 aa1.16□□□□□ -2.22
PPFIA2-217ENST00000549917 MYCBP2O75592 4640 aa1.16□□□□□ -2.22
PPFIA2-217ENST00000549917 FAT2Q9NYQ8 4349 aa1.15□□□□□ -2.22
PPFIA2-217ENST00000549917 DEFB133Q30KQ1 61 aa1.15□□□□□ -2.23
PPFIA2-217ENST00000549917 ACANP16112 2415 aa1.14□□□□□ -2.23
PPFIA2-217ENST00000549917 TNXBP22105 4242 aa1.14□□□□□ -2.23
PPFIA2-217ENST00000549917 NCOR2Q9Y618 2525 aa1.14□□□□□ -2.23
PPFIA2-217ENST00000549917 AKAP9Q99996 3911 aa1.13□□□□□ -2.23
PPFIA2-217ENST00000549917 KRTAP19-3Q7Z4W3 81 aa1.13□□□□□ -2.23
PPFIA2-217ENST00000549917 COL12A1Q99715 3063 aa1.13□□□□□ -2.23
PPFIA2-217ENST00000549917 ZNF469Q96JG9 3925 aaPredicted RBP1.13□□□□□ -2.23
PPFIA2-217ENST00000549917 NSD1Q96L73 2696 aaPredicted RBP1.12□□□□□ -2.23
PPFIA2-217ENST00000549917 SPENQ96T58 3664 aaKnown RBP1.12□□□□□ -2.23
PPFIA2-217ENST00000549917 A0A096LPF7 62 aa1.12□□□□□ -2.23
PPFIA2-217ENST00000549917 KRTAP5-10Q6L8G5 202 aa1.12□□□□□ -2.23
PPFIA2-217ENST00000549917 NF1P21359 2839 aa1.12□□□□□ -2.23
PPFIA2-217ENST00000549917 USP9YO00507 2555 aaPredicted RBP1.12□□□□□ -2.23
PPFIA2-217ENST00000549917 CACNA1AO00555 2505 aa1.12□□□□□ -2.23
PPFIA2-217ENST00000549917 DCHS2Q6V1P9 2916 aa1.12□□□□□ -2.23
PPFIA2-217ENST00000549917 DNAH3Q8TD57 4116 aa1.11□□□□□ -2.23
PPFIA2-217ENST00000549917 ITPR3Q14573 2671 aa1.11□□□□□ -2.23
PPFIA2-217ENST00000549917 DYNC2H1Q8NCM8 4307 aaKnown RBP1.11□□□□□ -2.23
PPFIA2-217ENST00000549917 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
PPFIA2-217ENST00000549917 STAB1Q9NY15 2570 aa1.1□□□□□ -2.23
PPFIA2-217ENST00000549917 PDZD2O15018 2839 aa1.09□□□□□ -2.23
PPFIA2-217ENST00000549917 MT1AP04731 61 aa1.09□□□□□ -2.23
PPFIA2-217ENST00000549917 CD52P31358 61 aa1.09□□□□□ -2.23
PPFIA2-217ENST00000549917 GCN1Q92616 2671 aaKnown RBP1.09□□□□□ -2.24
PPFIA2-217ENST00000549917 FRAS1Q86XX4 4008 aa1.08□□□□□ -2.24
PPFIA2-217ENST00000549917 SETXQ7Z333 2677 aaKnown RBP1.08□□□□□ -2.24
PPFIA2-217ENST00000549917 ANK3Q12955 4377 aaKnown RBP1.08□□□□□ -2.24
PPFIA2-217ENST00000549917 SPRR2BP35325 72 aa1.07□□□□□ -2.24
PPFIA2-217ENST00000549917 DNAH8Q96JB1 4490 aa1.07□□□□□ -2.24
PPFIA2-217ENST00000549917 LAMA5O15230 3695 aa1.07□□□□□ -2.24
PPFIA2-217ENST00000549917 SPRR2DP22532 72 aa1.06□□□□□ -2.24
PPFIA2-217ENST00000549917 SPG11Q96JI7 2443 aa1.06□□□□□ -2.24
PPFIA2-217ENST00000549917 ACACBO00763 2458 aa1.06□□□□□ -2.24
PPFIA2-217ENST00000549917 WDR87Q6ZQQ6 2873 aa1.06□□□□□ -2.24
PPFIA2-217ENST00000549917 UTP20O75691 2785 aaKnown RBP1.05□□□□□ -2.24
PPFIA2-217ENST00000549917 FRYLO94915 3013 aa1.05□□□□□ -2.24
PPFIA2-217ENST00000549917 NOTCH1P46531 2555 aa1.04□□□□□ -2.24
PPFIA2-217ENST00000549917 PKHD1L1Q86WI1 4243 aa1.04□□□□□ -2.24
PPFIA2-217ENST00000549917 RANBP2P49792 3224 aaKnown RBP1.04□□□□□ -2.24
PPFIA2-217ENST00000549917 PKD1L1Q8TDX9 2849 aa1.04□□□□□ -2.24
PPFIA2-217ENST00000549917 ZZEF1O43149 2961 aa1.04□□□□□ -2.24
PPFIA2-217ENST00000549917 SMR3BP02814 79 aaPredicted RBP1.04□□□□□ -2.24
PPFIA2-217ENST00000549917 CELSR3Q9NYQ7 3312 aa1.04□□□□□ -2.24
PPFIA2-217ENST00000549917 CUBNO60494 3623 aa1.04□□□□□ -2.24
PPFIA2-217ENST00000549917 CFAP54Q96N23 3096 aa1.04□□□□□ -2.24
PPFIA2-217ENST00000549917 ANKHD1Q8IWZ3 2542 aaKnown RBP1.04□□□□□ -2.24
PPFIA2-217ENST00000549917 HUWE1Q7Z6Z7 4374 aaKnown RBP1.03□□□□□ -2.24
PPFIA2-217ENST00000549917 COL7A1Q02388 2944 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms