RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 NDUFS5O43920 106 aa6.94□□□□□ -1.3
CCDC38-202ENST00000546386 CASC2Q6XLA1 102 aa6.94□□□□□ -1.3
CCDC38-202ENST00000546386 RETNLBQ9BQ08 111 aa6.93□□□□□ -1.3
CCDC38-202ENST00000546386 FAT3Q8TDW7 4589 aa6.93□□□□□ -1.3
CCDC38-202ENST00000546386 TYMSOSQ8TAI1 123 aa6.93□□□□□ -1.3
CCDC38-202ENST00000546386 A0A1B0GW54 56 aa6.92□□□□□ -1.3
CCDC38-202ENST00000546386 PRR4Q16378 134 aa6.92□□□□□ -1.3
CCDC38-202ENST00000546386 TMEM254Q8TBM7 123 aa6.9□□□□□ -1.3
CCDC38-202ENST00000546386 CDK2AP2O75956 126 aa6.9□□□□□ -1.31
CCDC38-202ENST00000546386 RYR1P21817 5038 aa6.89□□□□□ -1.31
CCDC38-202ENST00000546386 NDUFB1O75438 58 aa6.89□□□□□ -1.31
CCDC38-202ENST00000546386 MMP24-AS1A0A0U1RRL7 71 aa6.88□□□□□ -1.31
CCDC38-202ENST00000546386 hDV103S1A0JD37 113 aa6.88□□□□□ -1.31
CCDC38-202ENST00000546386 KRTAP29-1A8MX34 341 aaPredicted RBP6.86□□□□□ -1.31
CCDC38-202ENST00000546386 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
CCDC38-202ENST00000546386 SSBP3-AS1Q7Z2R9 100 aa6.86□□□□□ -1.31
CCDC38-202ENST00000546386 SMIM20Q8N5G0 67 aa6.86□□□□□ -1.31
CCDC38-202ENST00000546386 H7BZZ5 65 aa6.85□□□□□ -1.31
CCDC38-202ENST00000546386 A0A1B0GVX0 72 aa6.85□□□□□ -1.31
CCDC38-202ENST00000546386 C1orf195Q5TG92 126 aa6.85□□□□□ -1.31
CCDC38-202ENST00000546386 LINC00208Q96KT6 92 aa6.85□□□□□ -1.31
CCDC38-202ENST00000546386 C8orf17Q9NRJ1 99 aa6.85□□□□□ -1.31
CCDC38-202ENST00000546386 Q5VSD8 79 aa6.81□□□□□ -1.32
CCDC38-202ENST00000546386 C9orf92A6NGG3 77 aa6.79□□□□□ -1.32
CCDC38-202ENST00000546386 J3KT08 172 aa6.79□□□□□ -1.32
CCDC38-202ENST00000546386 KLKP1Q107X0 134 aa6.79□□□□□ -1.32
CCDC38-202ENST00000546386 PCOTHQ58A44 107 aa6.79□□□□□ -1.32
CCDC38-202ENST00000546386 ABCA13Q86UQ4 5058 aa6.79□□□□□ -1.32
CCDC38-202ENST00000546386 A0A0U1RQV1 116 aa6.79□□□□□ -1.32
CCDC38-202ENST00000546386 H0Y9P7 68 aa6.79□□□□□ -1.32
CCDC38-202ENST00000546386 LINC00304Q8N9R0 145 aa6.79□□□□□ -1.32
CCDC38-202ENST00000546386 OXTP01178 125 aa6.78□□□□□ -1.32
CCDC38-202ENST00000546386 FAM229BQ4G0N7 80 aa6.78□□□□□ -1.32
CCDC38-202ENST00000546386 TNXBP22105 4242 aa6.77□□□□□ -1.32
CCDC38-202ENST00000546386 Q5W150 140 aa6.77□□□□□ -1.33
CCDC38-202ENST00000546386 LINC00313P59037 77 aa6.75□□□□□ -1.33
CCDC38-202ENST00000546386 MRPL34Q9BQ48 92 aaKnown RBP6.75□□□□□ -1.33
CCDC38-202ENST00000546386 C1orf64Q8NEQ6 169 aa6.74□□□□□ -1.33
CCDC38-202ENST00000546386 FAM236DA0A1B0GTK5 79 aa6.73□□□□□ -1.33
CCDC38-202ENST00000546386 FAM236CP0DP71 79 aa6.73□□□□□ -1.33
CCDC38-202ENST00000546386 CD164Q04900 197 aa6.73□□□□□ -1.33
CCDC38-202ENST00000546386 Q8N1X5 172 aa6.73□□□□□ -1.33
CCDC38-202ENST00000546386 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
CCDC38-202ENST00000546386 MP68P56378 58 aa6.72□□□□□ -1.33
CCDC38-202ENST00000546386 TMEM258P61165 79 aa6.72□□□□□ -1.33
CCDC38-202ENST00000546386 C5orf47Q569G3 176 aa6.72□□□□□ -1.33
CCDC38-202ENST00000546386 TRAV22A0A0B4J277 110 aa6.71□□□□□ -1.33
CCDC38-202ENST00000546386 SPINK1P00995 79 aa6.71□□□□□ -1.34
CCDC38-202ENST00000546386 LPAP08519 4548 aa6.7□□□□□ -1.34
CCDC38-202ENST00000546386 LIMD2Q9BT23 127 aa6.69□□□□□ -1.34
CCDC38-202ENST00000546386 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
CCDC38-202ENST00000546386 ZCCHC13Q8WW36 166 aaKnown RBP6.67□□□□□ -1.34
CCDC38-202ENST00000546386 Q8N9P0 234 aaPredicted RBP6.65□□□□□ -1.34
CCDC38-202ENST00000546386 LRP2P98164 4655 aa6.63□□□□□ -1.35
CCDC38-202ENST00000546386 IGKV2D-30A0A075B6S6 120 aa6.63□□□□□ -1.35
CCDC38-202ENST00000546386 IGKV2-30P06310 120 aa6.63□□□□□ -1.35
CCDC38-202ENST00000546386 HERC2O95714 4834 aa6.62□□□□□ -1.35
CCDC38-202ENST00000546386 KRTAP16-1A8MUX0 517 aa6.62□□□□□ -1.35
CCDC38-202ENST00000546386 MPLKIPQ8TAP9 179 aa6.61□□□□□ -1.35
CCDC38-202ENST00000546386 NDUFC1O43677 76 aa6.6□□□□□ -1.35
CCDC38-202ENST00000546386 Q5XG85 94 aa6.6□□□□□ -1.35
CCDC38-202ENST00000546386 TP53AIP1Q9HCN2 124 aa6.59□□□□□ -1.36
CCDC38-202ENST00000546386 SPAG11AQ6PDA7 123 aa6.57□□□□□ -1.36
CCDC38-202ENST00000546386 C8orf87E5RJ46 101 aa6.56□□□□□ -1.36
CCDC38-202ENST00000546386 C4orf26Q17RF5 130 aa6.56□□□□□ -1.36
CCDC38-202ENST00000546386 KRTAP10-8P60410 259 aa6.55□□□□□ -1.36
CCDC38-202ENST00000546386 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
CCDC38-202ENST00000546386 MUC2Q02817 5179 aa6.54□□□□□ -1.36
CCDC38-202ENST00000546386 HERC1Q15751 4861 aa6.54□□□□□ -1.36
CCDC38-202ENST00000546386 CYP4F30PQ9H0H9 118 aa6.54□□□□□ -1.36
CCDC38-202ENST00000546386 PCLOQ9Y6V0 5065 aa6.53□□□□□ -1.36
CCDC38-202ENST00000546386 SERP1Q9Y6X1 66 aa6.53□□□□□ -1.36
CCDC38-202ENST00000546386 FP248Q71RG6 208 aaPredicted RBP6.52□□□□□ -1.37
CCDC38-202ENST00000546386 MT1HL1P0DM35 61 aa6.52□□□□□ -1.37
CCDC38-202ENST00000546386 HRES1P13985 223 aa6.5□□□□□ -1.37
CCDC38-202ENST00000546386 RPS28P62857 69 aaKnown RBP6.48□□□□□ -1.37
CCDC38-202ENST00000546386 H3BPC8 53 aa6.46□□□□□ -1.38
CCDC38-202ENST00000546386 IGLV7-46A0A075B6I9 117 aa6.45□□□□□ -1.38
CCDC38-202ENST00000546386 LOC101927531A0A1B0GV80 90 aa6.45□□□□□ -1.38
CCDC38-202ENST00000546386 PSPHP1O15172 72 aa6.45□□□□□ -1.38
CCDC38-202ENST00000546386 RPS29P62273 56 aaKnown RBP6.44□□□□□ -1.38
CCDC38-202ENST00000546386 COA5Q86WW8 74 aa6.44□□□□□ -1.38
CCDC38-202ENST00000546386 BIRC6Q9NR09 4857 aa6.43□□□□□ -1.38
CCDC38-202ENST00000546386 ATP5EP56381 51 aaPredicted RBP6.41□□□□□ -1.38
CCDC38-202ENST00000546386 SMIM26A0A096LP01 95 aa6.39□□□□□ -1.39
CCDC38-202ENST00000546386 SPANXA2-OT1Q8N9U9 137 aa6.39□□□□□ -1.39
CCDC38-202ENST00000546386 C7orf65Q6ZTY9 151 aa6.38□□□□□ -1.39
CCDC38-202ENST00000546386 SPINK7P58062 85 aa6.37□□□□□ -1.39
CCDC38-202ENST00000546386 A8MUU9 505 aa6.36□□□□□ -1.39
CCDC38-202ENST00000546386 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
CCDC38-202ENST00000546386 XP32Q5T750 250 aa6.35□□□□□ -1.39
CCDC38-202ENST00000546386 A8MUN3 132 aa6.34□□□□□ -1.39
CCDC38-202ENST00000546386 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
CCDC38-202ENST00000546386 ATP11AUNQ6ZP68 121 aa6.32□□□□□ -1.4
CCDC38-202ENST00000546386 CHKB-CPT1BH3BT56 60 aa6.31□□□□□ -1.4
CCDC38-202ENST00000546386 A8MU10 97 aa6.29□□□□□ -1.4
CCDC38-202ENST00000546386 RNF213Q63HN8 5207 aa6.28□□□□□ -1.4
CCDC38-202ENST00000546386 ACYP2P14621 99 aa6.28□□□□□ -1.4
CCDC38-202ENST00000546386 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
CCDC38-202ENST00000546386 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms