RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 A8MU10 97 aa4.99□□□□□ -1.61
MTHFD1-202ENST00000545908 NBPF19A0A087WUL8 3843 aa4.98□□□□□ -1.61
MTHFD1-202ENST00000545908 ATMQ13315 3056 aa4.95□□□□□ -1.62
MTHFD1-202ENST00000545908 KRTAP1-4P0C5Y4 121 aa4.94□□□□□ -1.62
MTHFD1-202ENST00000545908 WDFY3Q8IZQ1 3526 aa4.94□□□□□ -1.62
MTHFD1-202ENST00000545908 COL6A5A8TX70 2615 aa4.94□□□□□ -1.62
MTHFD1-202ENST00000545908 KALRNO60229 2985 aa4.93□□□□□ -1.62
MTHFD1-202ENST00000545908 A0A1B0GVY2 172 aa4.93□□□□□ -1.62
MTHFD1-202ENST00000545908 COL12A1Q99715 3063 aa4.93□□□□□ -1.62
MTHFD1-202ENST00000545908 CFAP47Q6ZTR5 3102 aa4.92□□□□□ -1.62
MTHFD1-202ENST00000545908 GCN1Q92616 2671 aaKnown RBP4.92□□□□□ -1.62
MTHFD1-202ENST00000545908 XP32Q5T750 250 aa4.92□□□□□ -1.62
MTHFD1-202ENST00000545908 A6NN06 94 aa4.91□□□□□ -1.62
MTHFD1-202ENST00000545908 APCP25054 2843 aa4.91□□□□□ -1.62
MTHFD1-202ENST00000545908 CRYBG3Q68DQ2 2970 aa4.91□□□□□ -1.62
MTHFD1-202ENST00000545908 ADGRG4Q8IZF6 3080 aa4.9□□□□□ -1.63
MTHFD1-202ENST00000545908 HIVEP1P15822 2718 aa4.9□□□□□ -1.63
MTHFD1-202ENST00000545908 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
MTHFD1-202ENST00000545908 MAP1AP78559 2803 aaPredicted RBP4.89□□□□□ -1.63
MTHFD1-202ENST00000545908 UBR5O95071 2799 aaPredicted RBP4.88□□□□□ -1.63
MTHFD1-202ENST00000545908 ANK3Q12955 4377 aaKnown RBP4.87□□□□□ -1.63
MTHFD1-202ENST00000545908 LOC400499M0QZD8 3231 aa4.87□□□□□ -1.63
MTHFD1-202ENST00000545908 NBEAQ8NFP9 2946 aa4.87□□□□□ -1.63
MTHFD1-202ENST00000545908 DMDP11532 3685 aa4.86□□□□□ -1.63
MTHFD1-202ENST00000545908 HRNRQ86YZ3 2850 aaPredicted RBP4.86□□□□□ -1.63
MTHFD1-202ENST00000545908 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
MTHFD1-202ENST00000545908 ZZEF1O43149 2961 aa4.86□□□□□ -1.63
MTHFD1-202ENST00000545908 NBEAL2Q6ZNJ1 2754 aa4.85□□□□□ -1.63
MTHFD1-202ENST00000545908 ITPR1Q14643 2758 aa4.84□□□□□ -1.63
MTHFD1-202ENST00000545908 STAB1Q9NY15 2570 aa4.84□□□□□ -1.64
MTHFD1-202ENST00000545908 DMBT1Q9UGM3 2413 aaPredicted RBP4.83□□□□□ -1.64
MTHFD1-202ENST00000545908 NSD1Q96L73 2696 aaPredicted RBP4.81□□□□□ -1.64
MTHFD1-202ENST00000545908 BSNQ9UPA5 3926 aa4.8□□□□□ -1.64
MTHFD1-202ENST00000545908 TNP1P09430 55 aa4.8□□□□□ -1.64
MTHFD1-202ENST00000545908 TENM4Q6N022 2769 aa4.79□□□□□ -1.64
MTHFD1-202ENST00000545908 NBEAL1Q6ZS30 2694 aa4.79□□□□□ -1.64
MTHFD1-202ENST00000545908 KRTAP13-3Q3SY46 172 aa4.78□□□□□ -1.64
MTHFD1-202ENST00000545908 RELNP78509 3460 aa4.77□□□□□ -1.65
MTHFD1-202ENST00000545908 FLNCQ14315 2725 aa4.77□□□□□ -1.65
MTHFD1-202ENST00000545908 NOTCH1P46531 2555 aa4.76□□□□□ -1.65
MTHFD1-202ENST00000545908 LAMA5O15230 3695 aa4.76□□□□□ -1.65
MTHFD1-202ENST00000545908 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
MTHFD1-202ENST00000545908 KRTAP10-8P60410 259 aa4.75□□□□□ -1.65
MTHFD1-202ENST00000545908 ZFHX4Q86UP3 3567 aa4.74□□□□□ -1.65
MTHFD1-202ENST00000545908 TACC2O95359 2948 aa4.74□□□□□ -1.65
MTHFD1-202ENST00000545908 DCHS1Q96JQ0 3298 aa4.73□□□□□ -1.65
MTHFD1-202ENST00000545908 CELSR2Q9HCU4 2923 aa4.69□□□□□ -1.66
MTHFD1-202ENST00000545908 FBN2P35556 2912 aa4.68□□□□□ -1.66
MTHFD1-202ENST00000545908 ALMS1Q8TCU4 4167 aa4.68□□□□□ -1.66
MTHFD1-202ENST00000545908 PDZD2O15018 2839 aa4.68□□□□□ -1.66
MTHFD1-202ENST00000545908 ASH1LQ9NR48 2969 aaKnown RBP4.67□□□□□ -1.66
MTHFD1-202ENST00000545908 SPENQ96T58 3664 aaKnown RBP4.64□□□□□ -1.67
MTHFD1-202ENST00000545908 CSMD1Q96PZ7 3565 aa4.64□□□□□ -1.67
MTHFD1-202ENST00000545908 PRO2289Q9P1D8 64 aa4.63□□□□□ -1.67
MTHFD1-202ENST00000545908 HUWE1Q7Z6Z7 4374 aaKnown RBP4.62□□□□□ -1.67
MTHFD1-202ENST00000545908 SMG1Q96Q15 3661 aaKnown RBP4.61□□□□□ -1.67
MTHFD1-202ENST00000545908 AKAP9Q99996 3911 aa4.6□□□□□ -1.67
MTHFD1-202ENST00000545908 CELSR1Q9NYQ6 3014 aa4.58□□□□□ -1.68
MTHFD1-202ENST00000545908 STAB2Q8WWQ8 2551 aa4.56□□□□□ -1.68
MTHFD1-202ENST00000545908 ZANQ9Y493 2812 aa4.56□□□□□ -1.68
MTHFD1-202ENST00000545908 NIPBLQ6KC79 2804 aaeCLIP4.55□□□□□ -1.68
MTHFD1-202ENST00000545908 DCHS2Q6V1P9 2916 aa4.53□□□□□ -1.68
MTHFD1-202ENST00000545908 TENM2Q9NT68 2774 aa4.52□□□□□ -1.69
MTHFD1-202ENST00000545908 MUC3AQ02505 3323 aa4.52□□□□□ -1.69
MTHFD1-202ENST00000545908 NF1P21359 2839 aa4.49□□□□□ -1.69
MTHFD1-202ENST00000545908 H0YAA0 97 aa4.49□□□□□ -1.69
MTHFD1-202ENST00000545908 ZFHX3Q15911 3703 aa4.45□□□□□ -1.7
MTHFD1-202ENST00000545908 OTOGQ6ZRI0 2925 aa4.43□□□□□ -1.7
MTHFD1-202ENST00000545908 SVEP1Q4LDE5 3571 aa4.43□□□□□ -1.7
MTHFD1-202ENST00000545908 CSMD2Q7Z408 3487 aa4.43□□□□□ -1.7
MTHFD1-202ENST00000545908 VPS13CQ709C8 3753 aa4.41□□□□□ -1.7
MTHFD1-202ENST00000545908 FBN1P35555 2871 aaKnown RBP4.4□□□□□ -1.7
MTHFD1-202ENST00000545908 MXRA5Q9NR99 2828 aa4.4□□□□□ -1.7
MTHFD1-202ENST00000545908 TRRAPQ9Y4A5 3859 aa4.39□□□□□ -1.71
MTHFD1-202ENST00000545908 KRTAP4-5Q9BYR2 181 aa4.39□□□□□ -1.71
MTHFD1-202ENST00000545908 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
MTHFD1-202ENST00000545908 TENM1Q9UKZ4 2725 aa4.37□□□□□ -1.71
MTHFD1-202ENST00000545908 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
MTHFD1-202ENST00000545908 DNAH9Q9NYC9 4486 aa4.33□□□□□ -1.72
MTHFD1-202ENST00000545908 ZNF469Q96JG9 3925 aaPredicted RBP4.31□□□□□ -1.72
MTHFD1-202ENST00000545908 TENM3Q9P273 2699 aa4.29□□□□□ -1.72
MTHFD1-202ENST00000545908 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
MTHFD1-202ENST00000545908 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
MTHFD1-202ENST00000545908 DNAH3Q8TD57 4116 aa4.24□□□□□ -1.73
MTHFD1-202ENST00000545908 CRCT1Q9UGL9 99 aa4.24□□□□□ -1.73
MTHFD1-202ENST00000545908 DNAH1Q9P2D7 4330 aa4.24□□□□□ -1.73
MTHFD1-202ENST00000545908 CUBNO60494 3623 aa4.24□□□□□ -1.73
MTHFD1-202ENST00000545908 CMYA5Q8N3K9 4069 aa4.23□□□□□ -1.73
MTHFD1-202ENST00000545908 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
MTHFD1-202ENST00000545908 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
MTHFD1-202ENST00000545908 VWFP04275 2813 aa4.21□□□□□ -1.74
MTHFD1-202ENST00000545908 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
MTHFD1-202ENST00000545908 TGP01266 2768 aa4.17□□□□□ -1.74
MTHFD1-202ENST00000545908 INE1O15225 51 aa4.16□□□□□ -1.74
MTHFD1-202ENST00000545908 PKD1L1Q8TDX9 2849 aa4.15□□□□□ -1.74
MTHFD1-202ENST00000545908 DNAH6Q9C0G6 4158 aa4.15□□□□□ -1.75
MTHFD1-202ENST00000545908 ANK2Q01484 3957 aa4.1□□□□□ -1.75
MTHFD1-202ENST00000545908 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
MTHFD1-202ENST00000545908 VPS13DQ5THJ4 4388 aa4.05□□□□□ -1.76
MTHFD1-202ENST00000545908 FAT2Q9NYQ8 4349 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 326 ms