RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 NBEAL2Q6ZNJ1 2754 aa4.41□□□□□ -1.7
TSC1-208ENST00000545250 CRCT1Q9UGL9 99 aa4.4□□□□□ -1.71
TSC1-208ENST00000545250 VCANP13611 3396 aa4.4□□□□□ -1.71
TSC1-208ENST00000545250 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
TSC1-208ENST00000545250 EYSQ5T1H1 3165 aa4.39□□□□□ -1.71
TSC1-208ENST00000545250 HTTP42858 3142 aa4.38□□□□□ -1.71
TSC1-208ENST00000545250 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
TSC1-208ENST00000545250 CELSR3Q9NYQ7 3312 aa4.36□□□□□ -1.71
TSC1-208ENST00000545250 COL6A3P12111 3177 aa4.35□□□□□ -1.71
TSC1-208ENST00000545250 TRIOO75962 3097 aa4.34□□□□□ -1.71
TSC1-208ENST00000545250 USP34Q70CQ2 3546 aa4.32□□□□□ -1.72
TSC1-208ENST00000545250 CHD7Q9P2D1 2997 aa4.32□□□□□ -1.72
TSC1-208ENST00000545250 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
TSC1-208ENST00000545250 TENM1Q9UKZ4 2725 aa4.31□□□□□ -1.72
TSC1-208ENST00000545250 WDFY4Q6ZS81 3184 aa4.31□□□□□ -1.72
TSC1-208ENST00000545250 SPTBN5Q9NRC6 3674 aaKnown RBP4.31□□□□□ -1.72
TSC1-208ENST00000545250 FLNCQ14315 2725 aa4.28□□□□□ -1.72
TSC1-208ENST00000545250 MYO15AQ9UKN7 3530 aa4.28□□□□□ -1.72
TSC1-208ENST00000545250 VPS13AQ96RL7 3174 aa4.26□□□□□ -1.73
TSC1-208ENST00000545250 TGP01266 2768 aa4.25□□□□□ -1.73
TSC1-208ENST00000545250 CHD9Q3L8U1 2897 aa4.23□□□□□ -1.73
TSC1-208ENST00000545250 FRYQ5TBA9 3013 aa4.23□□□□□ -1.73
TSC1-208ENST00000545250 SPEGQ15772 3267 aa4.23□□□□□ -1.73
TSC1-208ENST00000545250 CRYBG3Q68DQ2 2970 aa4.23□□□□□ -1.73
TSC1-208ENST00000545250 ITPR1Q14643 2758 aa4.23□□□□□ -1.73
TSC1-208ENST00000545250 LAMA1P25391 3075 aa4.22□□□□□ -1.73
TSC1-208ENST00000545250 CFAP54Q96N23 3096 aa4.22□□□□□ -1.73
TSC1-208ENST00000545250 KALRNO60229 2985 aa4.15□□□□□ -1.75
TSC1-208ENST00000545250 PDZD2O15018 2839 aa4.14□□□□□ -1.75
TSC1-208ENST00000545250 WDFY3Q8IZQ1 3526 aa4.13□□□□□ -1.75
TSC1-208ENST00000545250 HIVEP1P15822 2718 aa4.13□□□□□ -1.75
TSC1-208ENST00000545250 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
TSC1-208ENST00000545250 FRYLO94915 3013 aa4.13□□□□□ -1.75
TSC1-208ENST00000545250 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
TSC1-208ENST00000545250 NF1P21359 2839 aa4.13□□□□□ -1.75
TSC1-208ENST00000545250 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
TSC1-208ENST00000545250 TRANK1O15050 2925 aa4.12□□□□□ -1.75
TSC1-208ENST00000545250 DSPP15924 2871 aaKnown RBP4.11□□□□□ -1.75
TSC1-208ENST00000545250 TNRC18O15417 2968 aaPredicted RBP4.1□□□□□ -1.75
TSC1-208ENST00000545250 REV3LO60673 3130 aa4.09□□□□□ -1.75
TSC1-208ENST00000545250 MGAQ8IWI9 3026 aa4.09□□□□□ -1.75
TSC1-208ENST00000545250 FREM2Q5SZK8 3169 aa4.08□□□□□ -1.76
TSC1-208ENST00000545250 TENM4Q6N022 2769 aa4.07□□□□□ -1.76
TSC1-208ENST00000545250 NIPBLQ6KC79 2804 aaeCLIP4.06□□□□□ -1.76
TSC1-208ENST00000545250 LRBAP50851 2863 aa4.05□□□□□ -1.76
TSC1-208ENST00000545250 CELSR2Q9HCU4 2923 aa4.05□□□□□ -1.76
TSC1-208ENST00000545250 ASPMQ8IZT6 3477 aa4.04□□□□□ -1.76
TSC1-208ENST00000545250 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
TSC1-208ENST00000545250 DMDP11532 3685 aa4.03□□□□□ -1.76
TSC1-208ENST00000545250 BOD1L1Q8NFC6 3051 aa4.01□□□□□ -1.77
TSC1-208ENST00000545250 CFAP47Q6ZTR5 3102 aa4□□□□□ -1.77
TSC1-208ENST00000545250 ASH1LQ9NR48 2969 aaKnown RBP3.97□□□□□ -1.77
TSC1-208ENST00000545250 DMXL1Q9Y485 3027 aa3.96□□□□□ -1.78
TSC1-208ENST00000545250 MUC3AQ02505 3323 aa3.96□□□□□ -1.78
TSC1-208ENST00000545250 LAMA5O15230 3695 aa3.96□□□□□ -1.78
TSC1-208ENST00000545250 TENM2Q9NT68 2774 aa3.96□□□□□ -1.78
TSC1-208ENST00000545250 COL12A1Q99715 3063 aa3.95□□□□□ -1.78
TSC1-208ENST00000545250 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
TSC1-208ENST00000545250 LOC400499M0QZD8 3231 aa3.93□□□□□ -1.78
TSC1-208ENST00000545250 DMXL2Q8TDJ6 3036 aa3.93□□□□□ -1.78
TSC1-208ENST00000545250 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
TSC1-208ENST00000545250 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
TSC1-208ENST00000545250 ZFHX4Q86UP3 3567 aa3.9□□□□□ -1.78
TSC1-208ENST00000545250 ADGRG4Q8IZF6 3080 aa3.87□□□□□ -1.79
TSC1-208ENST00000545250 ATMQ13315 3056 aa3.87□□□□□ -1.79
TSC1-208ENST00000545250 ZANQ9Y493 2812 aa3.86□□□□□ -1.79
TSC1-208ENST00000545250 LORP23490 312 aaPredicted RBP3.86□□□□□ -1.79
TSC1-208ENST00000545250 NBPF19A0A087WUL8 3843 aa3.86□□□□□ -1.79
TSC1-208ENST00000545250 RELNP78509 3460 aa3.83□□□□□ -1.8
TSC1-208ENST00000545250 DCHS1Q96JQ0 3298 aa3.82□□□□□ -1.8
TSC1-208ENST00000545250 NBEAQ8NFP9 2946 aa3.81□□□□□ -1.8
TSC1-208ENST00000545250 ZZEF1O43149 2961 aa3.8□□□□□ -1.8
TSC1-208ENST00000545250 CELSR1Q9NYQ6 3014 aa3.79□□□□□ -1.8
TSC1-208ENST00000545250 SRRM2Q9UQ35 2752 aaKnown RBP3.79□□□□□ -1.8
TSC1-208ENST00000545250 DCHS2Q6V1P9 2916 aa3.78□□□□□ -1.8
TSC1-208ENST00000545250 VWFP04275 2813 aa3.78□□□□□ -1.8
TSC1-208ENST00000545250 PKD1L1Q8TDX9 2849 aa3.76□□□□□ -1.81
TSC1-208ENST00000545250 FBN3Q75N90 2809 aa3.74□□□□□ -1.81
TSC1-208ENST00000545250 SPENQ96T58 3664 aaKnown RBP3.73□□□□□ -1.81
TSC1-208ENST00000545250 SMG1Q96Q15 3661 aaKnown RBP3.73□□□□□ -1.81
TSC1-208ENST00000545250 KRTAP3-2Q9BYR7 98 aa3.71□□□□□ -1.82
TSC1-208ENST00000545250 CSMD1Q96PZ7 3565 aa3.71□□□□□ -1.82
TSC1-208ENST00000545250 TACC2O95359 2948 aa3.7□□□□□ -1.82
TSC1-208ENST00000545250 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
TSC1-208ENST00000545250 KRTAP3-3Q9BYR6 98 aa3.68□□□□□ -1.82
TSC1-208ENST00000545250 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
TSC1-208ENST00000545250 COL7A1Q02388 2944 aa3.67□□□□□ -1.82
TSC1-208ENST00000545250 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.82
TSC1-208ENST00000545250 ZFHX3Q15911 3703 aa3.65□□□□□ -1.82
TSC1-208ENST00000545250 SVEP1Q4LDE5 3571 aa3.65□□□□□ -1.83
TSC1-208ENST00000545250 MXRA5Q9NR99 2828 aa3.63□□□□□ -1.83
TSC1-208ENST00000545250 MEGF8Q7Z7M0 2845 aa3.63□□□□□ -1.83
TSC1-208ENST00000545250 CSMD2Q7Z408 3487 aa3.63□□□□□ -1.83
TSC1-208ENST00000545250 CUBNO60494 3623 aa3.61□□□□□ -1.83
TSC1-208ENST00000545250 BSNQ9UPA5 3926 aa3.6□□□□□ -1.83
TSC1-208ENST00000545250 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
TSC1-208ENST00000545250 FBN2P35556 2912 aa3.58□□□□□ -1.84
TSC1-208ENST00000545250 VPS13CQ709C8 3753 aa3.55□□□□□ -1.84
TSC1-208ENST00000545250 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
TSC1-208ENST00000545250 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms