RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
ATXN3-216ENST00000545170 KRTAP1-4P0C5Y4 121 aa4.31□□□□□ -1.72
ATXN3-216ENST00000545170 FLNAP21333 2647 aaKnown RBP4.31□□□□□ -1.72
ATXN3-216ENST00000545170 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
ATXN3-216ENST00000545170 FRYLO94915 3013 aa4.29□□□□□ -1.72
ATXN3-216ENST00000545170 MGAM2Q2M2H8 2515 aa4.29□□□□□ -1.72
ATXN3-216ENST00000545170 FRYQ5TBA9 3013 aa4.27□□□□□ -1.73
ATXN3-216ENST00000545170 FREM2Q5SZK8 3169 aa4.27□□□□□ -1.73
ATXN3-216ENST00000545170 NBEAQ8NFP9 2946 aa4.27□□□□□ -1.73
ATXN3-216ENST00000545170 UNC79Q9P2D8 2635 aa4.26□□□□□ -1.73
ATXN3-216ENST00000545170 HELZ2Q9BYK8 2649 aaKnown RBP4.26□□□□□ -1.73
ATXN3-216ENST00000545170 STAB2Q8WWQ8 2551 aa4.26□□□□□ -1.73
ATXN3-216ENST00000545170 KRTAP10-10P60014 251 aa4.25□□□□□ -1.73
ATXN3-216ENST00000545170 ITPR3Q14573 2671 aa4.24□□□□□ -1.73
ATXN3-216ENST00000545170 ATRQ13535 2644 aa4.24□□□□□ -1.73
ATXN3-216ENST00000545170 DSPP15924 2871 aaKnown RBP4.23□□□□□ -1.73
ATXN3-216ENST00000545170 VPS13AQ96RL7 3174 aa4.22□□□□□ -1.73
ATXN3-216ENST00000545170 SETXQ7Z333 2677 aaKnown RBP4.21□□□□□ -1.74
ATXN3-216ENST00000545170 NBEAL2Q6ZNJ1 2754 aa4.21□□□□□ -1.74
ATXN3-216ENST00000545170 KALRNO60229 2985 aa4.21□□□□□ -1.74
ATXN3-216ENST00000545170 DMXL2Q8TDJ6 3036 aa4.2□□□□□ -1.74
ATXN3-216ENST00000545170 BSNQ9UPA5 3926 aa4.2□□□□□ -1.74
ATXN3-216ENST00000545170 NOTCH1P46531 2555 aa4.18□□□□□ -1.74
ATXN3-216ENST00000545170 PDZD2O15018 2839 aa4.18□□□□□ -1.74
ATXN3-216ENST00000545170 MGAQ8IWI9 3026 aa4.17□□□□□ -1.74
ATXN3-216ENST00000545170 MAST4O15021 2626 aa4.16□□□□□ -1.74
ATXN3-216ENST00000545170 DNHD1Q96M86 4753 aa4.16□□□□□ -1.74
ATXN3-216ENST00000545170 APCP25054 2843 aa4.14□□□□□ -1.75
ATXN3-216ENST00000545170 OTOGQ6ZRI0 2925 aa4.13□□□□□ -1.75
ATXN3-216ENST00000545170 FLNCQ14315 2725 aa4.13□□□□□ -1.75
ATXN3-216ENST00000545170 LAMA1P25391 3075 aa4.12□□□□□ -1.75
ATXN3-216ENST00000545170 CFAP47Q6ZTR5 3102 aa4.12□□□□□ -1.75
ATXN3-216ENST00000545170 HECTD1Q9ULT8 2610 aa4.12□□□□□ -1.75
ATXN3-216ENST00000545170 ASPMQ8IZT6 3477 aa4.12□□□□□ -1.75
ATXN3-216ENST00000545170 KRTAP3-1Q9BYR8 98 aa4.12□□□□□ -1.75
ATXN3-216ENST00000545170 AKAP9Q99996 3911 aa4.11□□□□□ -1.75
ATXN3-216ENST00000545170 SMG1Q96Q15 3661 aaKnown RBP4.1□□□□□ -1.75
ATXN3-216ENST00000545170 FBN2P35556 2912 aa4.08□□□□□ -1.76
ATXN3-216ENST00000545170 CELSR3Q9NYQ7 3312 aa4.08□□□□□ -1.76
ATXN3-216ENST00000545170 STAB1Q9NY15 2570 aa4.08□□□□□ -1.76
ATXN3-216ENST00000545170 KRTAP10-6P60371 365 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-216ENST00000545170 COL6A5A8TX70 2615 aa4.07□□□□□ -1.76
ATXN3-216ENST00000545170 TEX15Q9BXT5 2789 aa4.07□□□□□ -1.76
ATXN3-216ENST00000545170 LAMA5O15230 3695 aa4.05□□□□□ -1.76
ATXN3-216ENST00000545170 WDFY3Q8IZQ1 3526 aa4.05□□□□□ -1.76
ATXN3-216ENST00000545170 ATMQ13315 3056 aa4.05□□□□□ -1.76
ATXN3-216ENST00000545170 NF1P21359 2839 aa4.05□□□□□ -1.76
ATXN3-216ENST00000545170 FLNBO75369 2602 aaKnown RBP4.04□□□□□ -1.76
ATXN3-216ENST00000545170 SPENQ96T58 3664 aaKnown RBP4.03□□□□□ -1.76
ATXN3-216ENST00000545170 FBN3Q75N90 2809 aa4.03□□□□□ -1.76
ATXN3-216ENST00000545170 LRBAP50851 2863 aa4.02□□□□□ -1.77
ATXN3-216ENST00000545170 ANK2Q01484 3957 aa4.02□□□□□ -1.77
ATXN3-216ENST00000545170 ANK3Q12955 4377 aaKnown RBP4.01□□□□□ -1.77
ATXN3-216ENST00000545170 NBPF19A0A087WUL8 3843 aa4.01□□□□□ -1.77
ATXN3-216ENST00000545170 LOC400499M0QZD8 3231 aa3.98□□□□□ -1.77
ATXN3-216ENST00000545170 NSD1Q96L73 2696 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-216ENST00000545170 ITPR2Q14571 2701 aa3.97□□□□□ -1.77
ATXN3-216ENST00000545170 MAP1AP78559 2803 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-216ENST00000545170 TGP01266 2768 aa3.97□□□□□ -1.77
ATXN3-216ENST00000545170 TEP1Q99973 2627 aaKnown RBP3.97□□□□□ -1.77
ATXN3-216ENST00000545170 UTP20O75691 2785 aaKnown RBP3.96□□□□□ -1.77
ATXN3-216ENST00000545170 HIVEP1P15822 2718 aa3.96□□□□□ -1.78
ATXN3-216ENST00000545170 BOD1L1Q8NFC6 3051 aa3.91□□□□□ -1.78
ATXN3-216ENST00000545170 CELSR2Q9HCU4 2923 aa3.91□□□□□ -1.78
ATXN3-216ENST00000545170 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
ATXN3-216ENST00000545170 ZFHX3Q15911 3703 aa3.9□□□□□ -1.79
ATXN3-216ENST00000545170 HRNRQ86YZ3 2850 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-216ENST00000545170 KRTAP3-2Q9BYR7 98 aa3.88□□□□□ -1.79
ATXN3-216ENST00000545170 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
ATXN3-216ENST00000545170 COL12A1Q99715 3063 aa3.86□□□□□ -1.79
ATXN3-216ENST00000545170 RELNP78509 3460 aa3.84□□□□□ -1.79
ATXN3-216ENST00000545170 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
ATXN3-216ENST00000545170 KRTAP3-3Q9BYR6 98 aa3.83□□□□□ -1.8
ATXN3-216ENST00000545170 CSMD1Q96PZ7 3565 aa3.81□□□□□ -1.8
ATXN3-216ENST00000545170 DCHS2Q6V1P9 2916 aa3.79□□□□□ -1.8
ATXN3-216ENST00000545170 RYR2Q92736 4967 aa3.79□□□□□ -1.8
ATXN3-216ENST00000545170 FBN1P35555 2871 aaKnown RBP3.79□□□□□ -1.8
ATXN3-216ENST00000545170 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
ATXN3-216ENST00000545170 BIRC6Q9NR09 4857 aa3.78□□□□□ -1.8
ATXN3-216ENST00000545170 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
ATXN3-216ENST00000545170 MEGF8Q7Z7M0 2845 aa3.77□□□□□ -1.81
ATXN3-216ENST00000545170 ZNF469Q96JG9 3925 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-216ENST00000545170 DNAH3Q8TD57 4116 aa3.77□□□□□ -1.81
ATXN3-216ENST00000545170 DYNC2H1Q8NCM8 4307 aaKnown RBP3.76□□□□□ -1.81
ATXN3-216ENST00000545170 ADGRG4Q8IZF6 3080 aa3.75□□□□□ -1.81
ATXN3-216ENST00000545170 TACC2O95359 2948 aa3.74□□□□□ -1.81
ATXN3-216ENST00000545170 CELSR1Q9NYQ6 3014 aa3.74□□□□□ -1.81
ATXN3-216ENST00000545170 CSMD2Q7Z408 3487 aa3.74□□□□□ -1.81
ATXN3-216ENST00000545170 MXRA5Q9NR99 2828 aa3.74□□□□□ -1.81
ATXN3-216ENST00000545170 CRYBG3Q68DQ2 2970 aa3.74□□□□□ -1.81
ATXN3-216ENST00000545170 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
ATXN3-216ENST00000545170 RYR3Q15413 4870 aa3.74□□□□□ -1.81
ATXN3-216ENST00000545170 CMYA5Q8N3K9 4069 aa3.71□□□□□ -1.82
ATXN3-216ENST00000545170 DNAH1Q9P2D7 4330 aa3.68□□□□□ -1.82
ATXN3-216ENST00000545170 TENM2Q9NT68 2774 aa3.68□□□□□ -1.82
ATXN3-216ENST00000545170 NIPBLQ6KC79 2804 aaeCLIP3.66□□□□□ -1.82
ATXN3-216ENST00000545170 HERC2O95714 4834 aa3.65□□□□□ -1.82
ATXN3-216ENST00000545170 TENM3Q9P273 2699 aa3.63□□□□□ -1.83
ATXN3-216ENST00000545170 SRRM2Q9UQ35 2752 aaKnown RBP3.63□□□□□ -1.83
ATXN3-216ENST00000545170 DNAH9Q9NYC9 4486 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms