RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 MMP24-AS1A0A0U1RRL7 71 aa6.43□□□□□ -1.38
TNC-213ENST00000544972 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
TNC-213ENST00000544972 IGHV6-1A0A0B4J1U7 121 aa6.43□□□□□ -1.38
TNC-213ENST00000544972 NOTCH2NLQ7Z3S9 236 aa6.43□□□□□ -1.38
TNC-213ENST00000544972 WFDC13Q8IUB5 93 aa6.42□□□□□ -1.38
TNC-213ENST00000544972 MT1HL1P0DM35 61 aa6.41□□□□□ -1.38
TNC-213ENST00000544972 C8orf17Q9NRJ1 99 aa6.41□□□□□ -1.38
TNC-213ENST00000544972 FAT3Q8TDW7 4589 aa6.4□□□□□ -1.38
TNC-213ENST00000544972 TNXBP22105 4242 aa6.4□□□□□ -1.38
TNC-213ENST00000544972 CASC2Q6XLA1 102 aa6.4□□□□□ -1.38
TNC-213ENST00000544972 OCR1Q9BZK8 76 aa6.39□□□□□ -1.39
TNC-213ENST00000544972 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
TNC-213ENST00000544972 SERP2Q8N6R1 65 aa6.39□□□□□ -1.39
TNC-213ENST00000544972 hDV103S1A0JD37 113 aa6.38□□□□□ -1.39
TNC-213ENST00000544972 BIRC6Q9NR09 4857 aa6.38□□□□□ -1.39
TNC-213ENST00000544972 TRAV7A0A075B6U4 112 aa6.36□□□□□ -1.39
TNC-213ENST00000544972 COX7CP15954 63 aa6.36□□□□□ -1.39
TNC-213ENST00000544972 SMIM20Q8N5G0 67 aa6.36□□□□□ -1.39
TNC-213ENST00000544972 C8orf87E5RJ46 101 aa6.35□□□□□ -1.39
TNC-213ENST00000544972 CCDC179H3BU77 68 aa6.35□□□□□ -1.39
TNC-213ENST00000544972 RETNLBQ9BQ08 111 aa6.35□□□□□ -1.39
TNC-213ENST00000544972 DMBT1Q9UGM3 2413 aaPredicted RBP6.34□□□□□ -1.39
TNC-213ENST00000544972 OXTP01178 125 aa6.34□□□□□ -1.39
TNC-213ENST00000544972 UQCRQO14949 82 aa6.34□□□□□ -1.4
TNC-213ENST00000544972 LINC00313P59037 77 aa6.34□□□□□ -1.4
TNC-213ENST00000544972 TMEM254Q8TBM7 123 aa6.33□□□□□ -1.4
TNC-213ENST00000544972 MRPL34Q9BQ48 92 aaKnown RBP6.33□□□□□ -1.4
TNC-213ENST00000544972 KRTAP16-1A8MUX0 517 aa6.32□□□□□ -1.4
TNC-213ENST00000544972 HERC2O95714 4834 aa6.31□□□□□ -1.4
TNC-213ENST00000544972 Q8N9P0 234 aaPredicted RBP6.27□□□□□ -1.41
TNC-213ENST00000544972 ABCA13Q86UQ4 5058 aa6.27□□□□□ -1.41
TNC-213ENST00000544972 C20orf197Q8N268 126 aa6.27□□□□□ -1.41
TNC-213ENST00000544972 NDUFS5O43920 106 aa6.26□□□□□ -1.41
TNC-213ENST00000544972 CYSTM1Q9H1C7 97 aa6.26□□□□□ -1.41
TNC-213ENST00000544972 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
TNC-213ENST00000544972 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
TNC-213ENST00000544972 C9orf92A6NGG3 77 aa6.24□□□□□ -1.41
TNC-213ENST00000544972 FP248Q71RG6 208 aaPredicted RBP6.24□□□□□ -1.41
TNC-213ENST00000544972 A0A0U1RQV1 116 aa6.23□□□□□ -1.41
TNC-213ENST00000544972 KLKP1Q107X0 134 aa6.23□□□□□ -1.41
TNC-213ENST00000544972 SNURFQ9Y675 71 aa6.23□□□□□ -1.41
TNC-213ENST00000544972 Q5W150 140 aa6.22□□□□□ -1.41
TNC-213ENST00000544972 TRAV22A0A0B4J277 110 aa6.21□□□□□ -1.42
TNC-213ENST00000544972 H0Y9P7 68 aa6.2□□□□□ -1.42
TNC-213ENST00000544972 KRTAP13-3Q3SY46 172 aa6.2□□□□□ -1.42
TNC-213ENST00000544972 IGLV7-46A0A075B6I9 117 aa6.2□□□□□ -1.42
TNC-213ENST00000544972 ZCCHC13Q8WW36 166 aaKnown RBP6.2□□□□□ -1.42
TNC-213ENST00000544972 MP68P56378 58 aa6.19□□□□□ -1.42
TNC-213ENST00000544972 C20orf166-AS1Q96NR2 134 aa6.18□□□□□ -1.42
TNC-213ENST00000544972 LINC00208Q96KT6 92 aa6.18□□□□□ -1.42
TNC-213ENST00000544972 A8MUU9 505 aa6.17□□□□□ -1.42
TNC-213ENST00000544972 J3QL48 77 aa6.17□□□□□ -1.42
TNC-213ENST00000544972 H3BPC8 53 aa6.16□□□□□ -1.42
TNC-213ENST00000544972 H7BZZ5 65 aa6.16□□□□□ -1.42
TNC-213ENST00000544972 PRR4Q16378 134 aa6.15□□□□□ -1.42
TNC-213ENST00000544972 C1orf64Q8NEQ6 169 aa6.15□□□□□ -1.42
TNC-213ENST00000544972 NDUFC1O43677 76 aa6.12□□□□□ -1.43
TNC-213ENST00000544972 Q75L30 129 aa6.12□□□□□ -1.43
TNC-213ENST00000544972 XP32Q5T750 250 aa6.11□□□□□ -1.43
TNC-213ENST00000544972 TPRXLQ17RH7 258 aa6.1□□□□□ -1.43
TNC-213ENST00000544972 LOC101927531A0A1B0GV80 90 aa6.09□□□□□ -1.44
TNC-213ENST00000544972 TMEM258P61165 79 aa6.09□□□□□ -1.44
TNC-213ENST00000544972 CYP4F30PQ9H0H9 118 aa6.08□□□□□ -1.44
TNC-213ENST00000544972 PCLOQ9Y6V0 5065 aa6.08□□□□□ -1.44
TNC-213ENST00000544972 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
TNC-213ENST00000544972 RPL37P61927 97 aaKnown RBP6.06□□□□□ -1.44
TNC-213ENST00000544972 PCOTHQ58A44 107 aa6.05□□□□□ -1.44
TNC-213ENST00000544972 LPAP08519 4548 aa6.03□□□□□ -1.44
TNC-213ENST00000544972 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.45
TNC-213ENST00000544972 FAM236DA0A1B0GTK5 79 aa6.02□□□□□ -1.45
TNC-213ENST00000544972 FAM236CP0DP71 79 aa6.02□□□□□ -1.45
TNC-213ENST00000544972 ATP11AUNQ6ZP68 121 aa6.01□□□□□ -1.45
TNC-213ENST00000544972 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
TNC-213ENST00000544972 LRP2P98164 4655 aa6□□□□□ -1.45
TNC-213ENST00000544972 C7orf65Q6ZTY9 151 aa5.99□□□□□ -1.45
TNC-213ENST00000544972 HRES1P13985 223 aa5.97□□□□□ -1.45
TNC-213ENST00000544972 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
TNC-213ENST00000544972 SPINK7P58062 85 aa5.97□□□□□ -1.45
TNC-213ENST00000544972 HERC1Q15751 4861 aa5.93□□□□□ -1.46
TNC-213ENST00000544972 C4orf26Q17RF5 130 aa5.89□□□□□ -1.47
TNC-213ENST00000544972 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
TNC-213ENST00000544972 RPS28P62857 69 aaKnown RBP5.88□□□□□ -1.47
TNC-213ENST00000544972 DMAC1Q96GE9 116 aa5.88□□□□□ -1.47
TNC-213ENST00000544972 SEC61BP60468 96 aaKnown RBP5.85□□□□□ -1.47
TNC-213ENST00000544972 KRTAP3-1Q9BYR8 98 aa5.85□□□□□ -1.47
TNC-213ENST00000544972 HMCN2Q8NDA2 5059 aa5.84□□□□□ -1.47
TNC-213ENST00000544972 ACYP2P14621 99 aa5.83□□□□□ -1.48
TNC-213ENST00000544972 COA5Q86WW8 74 aa5.82□□□□□ -1.48
TNC-213ENST00000544972 COX6B2Q6YFQ2 88 aa5.81□□□□□ -1.48
TNC-213ENST00000544972 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
TNC-213ENST00000544972 A8MUN3 132 aa5.8□□□□□ -1.48
TNC-213ENST00000544972 MPLKIPQ8TAP9 179 aa5.79□□□□□ -1.48
TNC-213ENST00000544972 MUC17Q685J3 4493 aa5.75□□□□□ -1.49
TNC-213ENST00000544972 SMIM26A0A096LP01 95 aa5.73□□□□□ -1.49
TNC-213ENST00000544972 CHKB-CPT1BH3BT56 60 aa5.71□□□□□ -1.5
TNC-213ENST00000544972 RBM12B-AS1Q9P1G2 102 aa5.69□□□□□ -1.5
TNC-213ENST00000544972 SVIPQ8NHG7 77 aa5.69□□□□□ -1.5
TNC-213ENST00000544972 KRTAP19-2Q3LHN2 52 aa5.67□□□□□ -1.5
TNC-213ENST00000544972 H1FX-AS1Q4G0G2 97 aa5.67□□□□□ -1.5
TNC-213ENST00000544972 MUC2Q02817 5179 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms