RNA–Protein interactions for RNA: ENST00000544154.1

NPIPB3-213, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-213ENST00000544154 SPTBN1Q01082 2364 aaKnown RBP0.64□□□□□ -2.31
NPIPB3-213ENST00000544154 SYNE2Q8WXH0 6885 aaKnown RBP0.64□□□□□ -2.31
NPIPB3-213ENST00000544154 APC2O95996 2303 aa0.64□□□□□ -2.31
NPIPB3-213ENST00000544154 NCBP2-AS2Q69YL0 99 aa0.64□□□□□ -2.31
NPIPB3-213ENST00000544154 NMES1Q9C002 83 aa0.64□□□□□ -2.31
NPIPB3-213ENST00000544154 CDC42BPGQ6DT37 1551 aa0.64□□□□□ -2.31
NPIPB3-213ENST00000544154 AKAP13Q12802 2813 aa0.64□□□□□ -2.31
NPIPB3-213ENST00000544154 MXRA5Q9NR99 2828 aa0.64□□□□□ -2.31
NPIPB3-213ENST00000544154 TSC2P49815 1807 aa0.64□□□□□ -2.31
NPIPB3-213ENST00000544154 ADGRG4Q8IZF6 3080 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 MUC5BQ9HC84 5762 aaPredicted RBP0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 WDFY3Q8IZQ1 3526 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 MYO15AQ9UKN7 3530 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 KIF1AQ12756 1690 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 PLCE1Q9P212 2302 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 TRIOO75962 3097 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 A0A0D9SG42 100 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 K7EQZ3 153 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 MRPL34Q9BQ48 92 aaKnown RBP0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 CDKN2A-AS1Q9UH64 79 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 APLNQ9ULZ1 77 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 DDX60LQ5H9U9 1706 aaKnown RBP0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 DYNC2H1Q8NCM8 4307 aaKnown RBP0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 ABCC6O95255 1503 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 FAT3Q8TDW7 4589 aa0.63□□□□□ -2.31
NPIPB3-213ENST00000544154 RNF213Q63HN8 5207 aa0.62□□□□□ -2.31
NPIPB3-213ENST00000544154 SPENQ96T58 3664 aaKnown RBP0.62□□□□□ -2.31
NPIPB3-213ENST00000544154 FSIP2Q5CZC0 6907 aa0.62□□□□□ -2.31
NPIPB3-213ENST00000544154 APCP25054 2843 aa0.62□□□□□ -2.31
NPIPB3-213ENST00000544154 C4AP0C0L4 1744 aa0.62□□□□□ -2.31
NPIPB3-213ENST00000544154 DOT1LQ8TEK3 1739 aa0.62□□□□□ -2.31
NPIPB3-213ENST00000544154 SONP18583 2426 aaKnown RBP0.62□□□□□ -2.31
NPIPB3-213ENST00000544154 I3L2K1 104 aa0.62□□□□□ -2.31
NPIPB3-213ENST00000544154 SPINK4O60575 86 aa0.62□□□□□ -2.31
NPIPB3-213ENST00000544154 NIPBLQ6KC79 2804 aaeCLIP0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 PRXQ9BXM0 1461 aa0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 LY75O60449 1722 aa0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 HMCN2Q8NDA2 5059 aa0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 PRKDCP78527 4128 aaKnown RBP0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 ETDCA0A1B0GVM5 59 aa0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 K7EMI3 77 aa0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 COX6B2Q6YFQ2 88 aa0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 DEFB105AQ8NG35 78 aa0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 DMBT1Q9UGM3 2413 aaPredicted RBP0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 CDC42BPAQ5VT25 1732 aa0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 CD163L1Q9NR16 1453 aa0.61□□□□□ -2.31
NPIPB3-213ENST00000544154 STAB2Q8WWQ8 2551 aa0.6□□□□□ -2.31
NPIPB3-213ENST00000544154 DMXL2Q8TDJ6 3036 aa0.6□□□□□ -2.31
NPIPB3-213ENST00000544154 TNCP24821 2201 aa0.6□□□□□ -2.31
NPIPB3-213ENST00000544154 DMDP11532 3685 aa0.6□□□□□ -2.31
NPIPB3-213ENST00000544154 LCE6AA0A183 80 aa0.6□□□□□ -2.31
NPIPB3-213ENST00000544154 KRTAP20-1Q3LI63 56 aa0.6□□□□□ -2.31
NPIPB3-213ENST00000544154 CENPEQ02224 2701 aa0.6□□□□□ -2.31
NPIPB3-213ENST00000544154 DDX60Q8IY21 1712 aaKnown RBP0.6□□□□□ -2.31
NPIPB3-213ENST00000544154 ACACAQ13085 2346 aa0.6□□□□□ -2.31
NPIPB3-213ENST00000544154 AHNAKQ09666 5890 aaKnown RBP0.6□□□□□ -2.31
NPIPB3-213ENST00000544154 DNAH1Q9P2D7 4330 aa0.6□□□□□ -2.31
NPIPB3-213ENST00000544154 MACF1Q9UPN3 7388 aaKnown RBP0.59□□□□□ -2.31
NPIPB3-213ENST00000544154 CSMD2Q7Z408 3487 aa0.59□□□□□ -2.31
NPIPB3-213ENST00000544154 C4BP0C0L5 1744 aa0.59□□□□□ -2.31
NPIPB3-213ENST00000544154 MAP1AP78559 2803 aaPredicted RBP0.59□□□□□ -2.31
NPIPB3-213ENST00000544154 DEFB131BA0A096LNP1 70 aa0.59□□□□□ -2.31
NPIPB3-213ENST00000544154 M0R1W7 72 aa0.59□□□□□ -2.31
NPIPB3-213ENST00000544154 NDUFA3O95167 84 aa0.59□□□□□ -2.31
NPIPB3-213ENST00000544154 PRH1P02810 166 aa0.59□□□□□ -2.31
NPIPB3-213ENST00000544154 LINC00158P58513 81 aa0.59□□□□□ -2.31
NPIPB3-213ENST00000544154 KCNQ1DNQ9H478 68 aa0.59□□□□□ -2.31
NPIPB3-213ENST00000544154 DCHS2Q6V1P9 2916 aa0.59□□□□□ -2.32
NPIPB3-213ENST00000544154 SACSQ9NZJ4 4579 aa0.59□□□□□ -2.32
NPIPB3-213ENST00000544154 FAM208AQ9UK61 1670 aaKnown RBP0.59□□□□□ -2.32
NPIPB3-213ENST00000544154 CHD9Q3L8U1 2897 aa0.59□□□□□ -2.32
NPIPB3-213ENST00000544154 AKAP9Q99996 3911 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 USF3Q68DE3 2245 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 ANK2Q01484 3957 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 CUBNO60494 3623 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 SNRPGP15A8MWD9 76 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 SPRR1BP22528 89 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 SPRR1AP35321 89 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 KRTAP10-4P60372 401 aaPredicted RBP0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 DEFB114Q30KQ6 69 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 DEFB109BQ30KR1 87 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 Q5VSD8 79 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 SPINK6Q6UWN8 80 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 SVEP1Q4LDE5 3571 aa0.58□□□□□ -2.32
NPIPB3-213ENST00000544154 ATMQ13315 3056 aa0.57□□□□□ -2.32
NPIPB3-213ENST00000544154 LOC730098B7Z3J9 87 aa0.57□□□□□ -2.32
NPIPB3-213ENST00000544154 PLNP26678 52 aa0.57□□□□□ -2.32
NPIPB3-213ENST00000544154 KLK9Q2XQG4 91 aa0.57□□□□□ -2.32
NPIPB3-213ENST00000544154 H1FX-AS1Q4G0G2 97 aa0.57□□□□□ -2.32
NPIPB3-213ENST00000544154 KRTAP5-10Q6L8G5 202 aa0.57□□□□□ -2.32
NPIPB3-213ENST00000544154 WFDC13Q8IUB5 93 aa0.57□□□□□ -2.32
NPIPB3-213ENST00000544154 H0YGX0 51 aa0.56□□□□□ -2.32
NPIPB3-213ENST00000544154 SPINK1P00995 79 aa0.56□□□□□ -2.32
NPIPB3-213ENST00000544154 CRIP1P50238 77 aa0.56□□□□□ -2.32
NPIPB3-213ENST00000544154 MINOS1Q5TGZ0 78 aa0.56□□□□□ -2.32
NPIPB3-213ENST00000544154 TIMM8BQ9Y5J9 83 aaPredicted RBP0.56□□□□□ -2.32
NPIPB3-213ENST00000544154 DUOX1Q9NRD9 1551 aa0.56□□□□□ -2.32
NPIPB3-213ENST00000544154 PKDREJQ9NTG1 2253 aa0.55□□□□□ -2.32
NPIPB3-213ENST00000544154 USH2AO75445 5202 aa0.55□□□□□ -2.32
NPIPB3-213ENST00000544154 VPS13CQ709C8 3753 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms