RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 TRACP01848 142 aa10.27□□□□□ -0.77
MSRB3-208ENST00000538725 NOTCH2NLQ7Z3S9 236 aa10.27□□□□□ -0.77
MSRB3-208ENST00000538725 KRTAP9-8Q9BYQ0 159 aa10.24□□□□□ -0.77
MSRB3-208ENST00000538725 UQCR10Q9UDW1 63 aa10.23□□□□□ -0.77
MSRB3-208ENST00000538725 IGHV6-1A0A0B4J1U7 121 aa10.22□□□□□ -0.77
MSRB3-208ENST00000538725 SCGB1C2P0DMR2 95 aa10.2□□□□□ -0.78
MSRB3-208ENST00000538725 RBM3P98179 157 aaKnown RBP10.2□□□□□ -0.78
MSRB3-208ENST00000538725 LCE1DQ5T752 114 aa10.19□□□□□ -0.78
MSRB3-208ENST00000538725 FAM236DA0A1B0GTK5 79 aa10.18□□□□□ -0.78
MSRB3-208ENST00000538725 FAM236CP0DP71 79 aa10.18□□□□□ -0.78
MSRB3-208ENST00000538725 VPS25Q9BRG1 176 aa10.18□□□□□ -0.78
MSRB3-208ENST00000538725 DSCR8Q96T75 97 aa10.17□□□□□ -0.78
MSRB3-208ENST00000538725 RBM12B-AS1Q9P1G2 102 aa10.17□□□□□ -0.78
MSRB3-208ENST00000538725 C8orf87E5RJ46 101 aa10.15□□□□□ -0.78
MSRB3-208ENST00000538725 HRES1P13985 223 aa10.15□□□□□ -0.78
MSRB3-208ENST00000538725 MPLKIPQ8TAP9 179 aa10.15□□□□□ -0.78
MSRB3-208ENST00000538725 A0A1B0GVX0 72 aa10.14□□□□□ -0.79
MSRB3-208ENST00000538725 BAALC-AS2P0C853 105 aa10.12□□□□□ -0.79
MSRB3-208ENST00000538725 LCE4AQ5TA78 99 aa10.12□□□□□ -0.79
MSRB3-208ENST00000538725 C21orf62-AS1Q17RA5 79 aa10.11□□□□□ -0.79
MSRB3-208ENST00000538725 C9JAW5 83 aa10.1□□□□□ -0.79
MSRB3-208ENST00000538725 J3KT08 172 aa10.09□□□□□ -0.79
MSRB3-208ENST00000538725 TMA7Q9Y2S6 64 aaKnown RBP10.08□□□□□ -0.8
MSRB3-208ENST00000538725 Q6ZQT0 140 aa10.06□□□□□ -0.8
MSRB3-208ENST00000538725 MT2AP02795 61 aa10.05□□□□□ -0.8
MSRB3-208ENST00000538725 ZCCHC13Q8WW36 166 aaKnown RBP10.03□□□□□ -0.8
MSRB3-208ENST00000538725 NDUFB1O75438 58 aa10.02□□□□□ -0.81
MSRB3-208ENST00000538725 MTURNQ8N3F0 131 aa10.02□□□□□ -0.81
MSRB3-208ENST00000538725 JMJD7-PLA2G4BH0Y9G9 81 aa9.99□□□□□ -0.81
MSRB3-208ENST00000538725 SPINK7P58062 85 aa9.99□□□□□ -0.81
MSRB3-208ENST00000538725 ATXN8Q156A1 80 aa9.99□□□□□ -0.81
MSRB3-208ENST00000538725 USH2AO75445 5202 aa9.99□□□□□ -0.81
MSRB3-208ENST00000538725 A0A1B0GW54 56 aa9.98□□□□□ -0.81
MSRB3-208ENST00000538725 KRTAP9-7A8MTY7 169 aa9.98□□□□□ -0.81
MSRB3-208ENST00000538725 Q8N9P0 234 aaPredicted RBP9.98□□□□□ -0.81
MSRB3-208ENST00000538725 KRTAP4-7Q9BYR0 210 aa9.98□□□□□ -0.81
MSRB3-208ENST00000538725 MT1FP04733 61 aa9.97□□□□□ -0.81
MSRB3-208ENST00000538725 LOC110117498A0A087WWA1 95 aa9.95□□□□□ -0.82
MSRB3-208ENST00000538725 M0R143 59 aa9.95□□□□□ -0.82
MSRB3-208ENST00000538725 KRTAP10-10P60014 251 aa9.95□□□□□ -0.82
MSRB3-208ENST00000538725 A8MWP4 228 aa9.94□□□□□ -0.82
MSRB3-208ENST00000538725 NAA38Q9BRA0 125 aaKnown RBP9.94□□□□□ -0.82
MSRB3-208ENST00000538725 SSPOA2VEC9 5147 aa9.93□□□□□ -0.82
MSRB3-208ENST00000538725 PDE6GP18545 87 aa9.93□□□□□ -0.82
MSRB3-208ENST00000538725 KRTAP9-3Q9BYQ3 159 aa9.93□□□□□ -0.82
MSRB3-208ENST00000538725 C8orf17Q9NRJ1 99 aa9.93□□□□□ -0.82
MSRB3-208ENST00000538725 IGKV3D-7A0A0C4DH55 119 aa9.9□□□□□ -0.82
MSRB3-208ENST00000538725 LYRM7Q5U5X0 104 aa9.9□□□□□ -0.82
MSRB3-208ENST00000538725 C9orf118A6NHY6 69 aa9.88□□□□□ -0.83
MSRB3-208ENST00000538725 C14orf132Q9NPU4 83 aa9.87□□□□□ -0.83
MSRB3-208ENST00000538725 Q6ZVQ6 151 aa9.86□□□□□ -0.83
MSRB3-208ENST00000538725 NREPQ16612 68 aa9.84□□□□□ -0.83
MSRB3-208ENST00000538725 PRR15Q8IV56 129 aa9.84□□□□□ -0.83
MSRB3-208ENST00000538725 KRTAP4-9Q9BYQ8 210 aa9.83□□□□□ -0.84
MSRB3-208ENST00000538725 WFDC13Q8IUB5 93 aa9.82□□□□□ -0.84
MSRB3-208ENST00000538725 MRPL34Q9BQ48 92 aaKnown RBP9.77□□□□□ -0.85
MSRB3-208ENST00000538725 TMEM254Q8TBM7 123 aa9.76□□□□□ -0.85
MSRB3-208ENST00000538725 MMP24-AS1A0A0U1RRL7 71 aa9.75□□□□□ -0.85
MSRB3-208ENST00000538725 SMIM6P0DI80 62 aa9.75□□□□□ -0.85
MSRB3-208ENST00000538725 FCGBPQ9Y6R7 5405 aaPredicted RBP9.74□□□□□ -0.85
MSRB3-208ENST00000538725 hDV103S1A0JD37 113 aa9.71□□□□□ -0.86
MSRB3-208ENST00000538725 BATFQ16520 125 aa9.71□□□□□ -0.86
MSRB3-208ENST00000538725 K7EQZ3 153 aa9.69□□□□□ -0.86
MSRB3-208ENST00000538725 TSTD3H0UI37 97 aa9.68□□□□□ -0.86
MSRB3-208ENST00000538725 NDUFS5O43920 106 aa9.68□□□□□ -0.86
MSRB3-208ENST00000538725 H3BT86 120 aa9.67□□□□□ -0.86
MSRB3-208ENST00000538725 H1FX-AS1Q4G0G2 97 aa9.66□□□□□ -0.86
MSRB3-208ENST00000538725 LCE5AQ5TCM9 118 aa9.64□□□□□ -0.87
MSRB3-208ENST00000538725 BPY2O14599 106 aa9.63□□□□□ -0.87
MSRB3-208ENST00000538725 LINC00846Q9NV44 126 aa9.63□□□□□ -0.87
MSRB3-208ENST00000538725 A0A1W2PPM0 123 aa9.61□□□□□ -0.87
MSRB3-208ENST00000538725 TAX1BP3O14907 124 aa9.6□□□□□ -0.87
MSRB3-208ENST00000538725 KRTAP19-6Q3LI70 58 aa9.59□□□□□ -0.87
MSRB3-208ENST00000538725 IGKV2D-30A0A075B6S6 120 aa9.58□□□□□ -0.88
MSRB3-208ENST00000538725 IGKV2-30P06310 120 aa9.58□□□□□ -0.88
MSRB3-208ENST00000538725 Q5W150 140 aa9.58□□□□□ -0.88
MSRB3-208ENST00000538725 C7orf65Q6ZTY9 151 aa9.55□□□□□ -0.88
MSRB3-208ENST00000538725 KRTAP4-11Q9BYQ6 195 aa9.53□□□□□ -0.88
MSRB3-208ENST00000538725 CASC2Q6XLA1 102 aa9.52□□□□□ -0.89
MSRB3-208ENST00000538725 Q8N9L7 120 aa9.51□□□□□ -0.89
MSRB3-208ENST00000538725 KRTAP3-1Q9BYR8 98 aa9.51□□□□□ -0.89
MSRB3-208ENST00000538725 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
MSRB3-208ENST00000538725 KRTAP4-2Q9BYR5 136 aa9.5□□□□□ -0.89
MSRB3-208ENST00000538725 MACF1Q9UPN3 7388 aaKnown RBP9.46□□□□□ -0.89
MSRB3-208ENST00000538725 CXCL6P80162 114 aa9.45□□□□□ -0.9
MSRB3-208ENST00000538725 SPCS1Q9Y6A9 102 aa9.45□□□□□ -0.9
MSRB3-208ENST00000538725 C4orf26Q17RF5 130 aa9.44□□□□□ -0.9
MSRB3-208ENST00000538725 LOC105371267A0A1B0GV96 52 aa9.43□□□□□ -0.9
MSRB3-208ENST00000538725 UBL5Q9BZL1 73 aa9.39□□□□□ -0.91
MSRB3-208ENST00000538725 SYNE2Q8WXH0 6885 aaKnown RBP9.35□□□□□ -0.91
MSRB3-208ENST00000538725 PRO0461Q9UI25 63 aa9.32□□□□□ -0.92
MSRB3-208ENST00000538725 C5orf47Q569G3 176 aa9.31□□□□□ -0.92
MSRB3-208ENST00000538725 COL5A1-AS1Q5SY13 56 aa9.29□□□□□ -0.92
MSRB3-208ENST00000538725 C1orf64Q8NEQ6 169 aa9.26□□□□□ -0.93
MSRB3-208ENST00000538725 S4R3F8 94 aa9.26□□□□□ -0.93
MSRB3-208ENST00000538725 K7EP34 96 aa9.25□□□□□ -0.93
MSRB3-208ENST00000538725 FAM236AA0A1B0GUQ0 79 aa9.24□□□□□ -0.93
MSRB3-208ENST00000538725 FAM236BA0A1B0GV22 79 aa9.24□□□□□ -0.93
MSRB3-208ENST00000538725 CSAG1Q6PB30 78 aa9.23□□□□□ -0.93
MSRB3-208ENST00000538725 TP53AIP1Q9HCN2 124 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms